; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011107 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011107
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:14703225..14704984
RNA-Seq ExpressionLag0011107
SyntenyLag0011107
Gene Ontology termsGO:0044249 - cellular biosynthetic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:1901576 - organic substance biosynthetic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032235.1 peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]1.7e-1745.79Show/hide
Query:  VYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFTRLSCGRKVAVEENGGWRVARVDLD
        VY PPR  GR  FW EL D +  CG  WC+ GDFNV   P EKA GG+IT ++R FN FI+   LFDP +  GKFT  +C               R+D  
Subjt:  VYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFTRLSCGRKVAVEENGGWRVARVDLD

Query:  LGSVAWL
        L S AW+
Subjt:  LGSVAWL

TYK22164.1 peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]1.7e-1745.79Show/hide
Query:  VYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFTRLSCGRKVAVEENGGWRVARVDLD
        VY PPR  GR  FW EL D +  CG  WC+ GDFNV   P EKA GG+IT ++R FN FI+   LFDP +  GKFT  +C               R+D  
Subjt:  VYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFTRLSCGRKVAVEENGGWRVARVDLD

Query:  LGSVAWL
        L S AW+
Subjt:  LGSVAWL

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]2.5e-1651.85Show/hide
Query:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT
        W  SG+Y P R   R  FW EL+D +G CG  WC+ GDFNV RF +EK+  GR+T +MR FN FI+  NL DP++ N  FT
Subjt:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT

VVA21938.1 Hypothetical predicted protein, partial [Prunus dulcis]1.3e-1755.56Show/hide
Query:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT
        W  SG+Y P     RR FW EL+  FGLCG+ WCI GDFNV RF SEK+ GGR+T +M+ FN FI+  NL DP++ N  FT
Subjt:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT

VVA41200.1 PREDICTED: RNA-directed DNA polymerase, partial [Prunus dulcis]7.8e-1855.56Show/hide
Query:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT
        W  SG+Y P     RR FW EL+  FGLCG+ WCI GDFNV RF SEK+ GGR+T +M+ FN FI+  NL DP++ N  FT
Subjt:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT

TrEMBL top hitse value%identityAlignment
A0A5A7SSQ8 Peptidyl-prolyl cis-trans isomerase CYP23 isoform X18.4e-1845.79Show/hide
Query:  VYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFTRLSCGRKVAVEENGGWRVARVDLD
        VY PPR  GR  FW EL D +  CG  WC+ GDFNV   P EKA GG+IT ++R FN FI+   LFDP +  GKFT  +C               R+D  
Subjt:  VYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFTRLSCGRKVAVEENGGWRVARVDLD

Query:  LGSVAWL
        L S AW+
Subjt:  LGSVAWL

A0A5D3DEZ6 Peptidyl-prolyl cis-trans isomerase CYP23 isoform X18.4e-1845.79Show/hide
Query:  VYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFTRLSCGRKVAVEENGGWRVARVDLD
        VY PPR  GR  FW EL D +  CG  WC+ GDFNV   P EKA GG+IT ++R FN FI+   LFDP +  GKFT  +C               R+D  
Subjt:  VYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFTRLSCGRKVAVEENGGWRVARVDLD

Query:  LGSVAWL
        L S AW+
Subjt:  LGSVAWL

A0A5E4F859 Reverse transcriptase domain-containing protein (Fragment)6.4e-1855.56Show/hide
Query:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT
        W  SG+Y P     RR FW EL+  FGLCG+ WCI GDFNV RF SEK+ GGR+T +M+ FN FI+  NL DP++ N  FT
Subjt:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT

A0A5E4GN72 PREDICTED: RNA-directed DNA polymerase (Fragment)3.8e-1855.56Show/hide
Query:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT
        W  SG+Y P     RR FW EL+  FGLCG+ WCI GDFNV RF SEK+ GGR+T +M+ FN FI+  NL DP++ N  FT
Subjt:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT

M5X2E2 Reverse transcriptase domain-containing protein (Fragment)1.9e-1754.32Show/hide
Query:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT
        W  S +Y P     RR FW EL+  FGLCG+ WCI GDFNV RF SEK+ GGR+T +M+ FN FI+  NL DP++ N  FT
Subjt:  WIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCCTATGGGTTGGATACATTCGGGTGTTTATGTCCCTCCTAGGGCTTGGGGAAGAAGGGATTTTTGGAATGAGTTGAGCGACCCCTTTGGTCTTTGCGGGTCTTG
TTGGTGTATTGCGGGGGATTTTAATGTCACGAGGTTCCCTTCTGAAAAGGCCTTCGGGGGCAGGATCACAGGAGCCATGAGACAGTTTAACATCTTTATAGAGGGATGCA
ATCTTTTTGATCCCTCAGTAGCAAATGGGAAGTTCACAAGACTGTCTTGTGGAAGGAAGGTGGCTGTTGAGGAAAACGGGGGTTGGAGGGTGGCTAGAGTAGATTTGGAC
CTTGGGTCTGTAGCTTGGCTGAGTGATTGCCTTTTGGCAGCGACGAGAAGCACGAATGTGTATGGGGTGGCTTTGATTGAGAGCTTTAAAGGGAGAAGAAGAGTTGTTTT
TCTGCCGGAAGGGAAAAAGCAAAGCGTGGCTGGAAATTGCAAAACTGAAGGGAATTTGGGGCCAAAGGCTAATCCAAATGTTGAGTTGGCATTTGATATCCAATCAGCGA
TTATTGTTGAAAAGCTAAATGGTAAGGAAGCTTGGTTTCGAATGAAGGATTTGATGGATTCGAAGCTTAAGGTTAGGTACATCCTTAAACCCTTTTATTGCAATTTAGCT
GTGGGAATTTGTGGGAGTAAGGAGGAGGTTGAGAAAATGGTTCAGGAAGCTAGTCTGCTTAAGGCGGATGGCTTTTTTTTTATCCATGAATGGGATTTTAAATTGTTTGT
TGAGGGAAGATGCCAAAAATATGCGGGAGGATGGGTTACAGTGATGGACGTTCCTCCTTTCCTTTGTATCGCTAAGTTCGTGGAAACCCTGGCGGGGTATTATGGGGGTC
TGATTGAAGAAGACTATGATTCATCAAGGGAGGGGTTATGGACAGAGCGTGTTGCGGTTCAGGCTAAGGGAATCAAAAGTGGCTTGTTTCCGATGAACTATCTTCTCCAG
CATGGTGGTTTCTGGTTTTCGGTGAGATTTGTGCCTGGCTGGAAGGTGGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGCCTATGGGTTGGATACATTCGGGTGTTTATGTCCCTCCTAGGGCTTGGGGAAGAAGGGATTTTTGGAATGAGTTGAGCGACCCCTTTGGTCTTTGCGGGTCTTG
TTGGTGTATTGCGGGGGATTTTAATGTCACGAGGTTCCCTTCTGAAAAGGCCTTCGGGGGCAGGATCACAGGAGCCATGAGACAGTTTAACATCTTTATAGAGGGATGCA
ATCTTTTTGATCCCTCAGTAGCAAATGGGAAGTTCACAAGACTGTCTTGTGGAAGGAAGGTGGCTGTTGAGGAAAACGGGGGTTGGAGGGTGGCTAGAGTAGATTTGGAC
CTTGGGTCTGTAGCTTGGCTGAGTGATTGCCTTTTGGCAGCGACGAGAAGCACGAATGTGTATGGGGTGGCTTTGATTGAGAGCTTTAAAGGGAGAAGAAGAGTTGTTTT
TCTGCCGGAAGGGAAAAAGCAAAGCGTGGCTGGAAATTGCAAAACTGAAGGGAATTTGGGGCCAAAGGCTAATCCAAATGTTGAGTTGGCATTTGATATCCAATCAGCGA
TTATTGTTGAAAAGCTAAATGGTAAGGAAGCTTGGTTTCGAATGAAGGATTTGATGGATTCGAAGCTTAAGGTTAGGTACATCCTTAAACCCTTTTATTGCAATTTAGCT
GTGGGAATTTGTGGGAGTAAGGAGGAGGTTGAGAAAATGGTTCAGGAAGCTAGTCTGCTTAAGGCGGATGGCTTTTTTTTTATCCATGAATGGGATTTTAAATTGTTTGT
TGAGGGAAGATGCCAAAAATATGCGGGAGGATGGGTTACAGTGATGGACGTTCCTCCTTTCCTTTGTATCGCTAAGTTCGTGGAAACCCTGGCGGGGTATTATGGGGGTC
TGATTGAAGAAGACTATGATTCATCAAGGGAGGGGTTATGGACAGAGCGTGTTGCGGTTCAGGCTAAGGGAATCAAAAGTGGCTTGTTTCCGATGAACTATCTTCTCCAG
CATGGTGGTTTCTGGTTTTCGGTGAGATTTGTGCCTGGCTGGAAGGTGGCATAG
Protein sequenceShow/hide protein sequence
MWPMGWIHSGVYVPPRAWGRRDFWNELSDPFGLCGSCWCIAGDFNVTRFPSEKAFGGRITGAMRQFNIFIEGCNLFDPSVANGKFTRLSCGRKVAVEENGGWRVARVDLD
LGSVAWLSDCLLAATRSTNVYGVALIESFKGRRRVVFLPEGKKQSVAGNCKTEGNLGPKANPNVELAFDIQSAIIVEKLNGKEAWFRMKDLMDSKLKVRYILKPFYCNLA
VGICGSKEEVEKMVQEASLLKADGFFFIHEWDFKLFVEGRCQKYAGGWVTVMDVPPFLCIAKFVETLAGYYGGLIEEDYDSSREGLWTERVAVQAKGIKSGLFPMNYLLQ
HGGFWFSVRFVPGWKVA