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Lag0011116 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011116
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:14910101..14910448
RNA-Seq ExpressionLag0011116
SyntenyLag0011116
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015386823.1 uncharacterized protein LOC107177480 [Citrus sinensis]8.0e-1244.09Show/hide
Query:  AREQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSER
        A+++ KP   LLTVKQQ  E+LRDYI  +NNE +QV+GY++G +L  I  GL+  +L  S+ K  P +Y+E ++R +KY + EE  K++  E+
Subjt:  AREQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSER

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]3.6e-1243.12Show/hide
Query:  REQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSS
        R + KP   LLT+KQ+  ESL++Y+  FN E LQVEG  +  AL+A  +G++DERL+ S GK  P T+ E +SRAQKYMS  EL+   +     + + S+
Subjt:  REQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSS

Query:  DHESKKDKK
          E + +K+
Subjt:  DHESKKDKK

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.3e-1145.19Show/hide
Query:  REQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSS
        R + +P   LLT+KQ+  ESLRDY+  FN E LQVEG  +  +L+A  +G+ DE L  S GK  P T++E +SRAQ+YMS  E   SK+ E + KR+   
Subjt:  REQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSS

Query:  DHES
           S
Subjt:  DHES

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]1.4e-1140.91Show/hide
Query:  AREQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSS
        AR++ KP   LLTVKQQ GE+LRDYI  +NNE  QV+GY++G AL  I  GL   +L  S+ K  P +Y+E ++RA+KY + EE  K++  E+       
Subjt:  AREQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSS

Query:  SDHESKKDKK
           + +++++
Subjt:  SDHESKKDKK

XP_024047974.1 uncharacterized protein LOC112101548 [Citrus clementina]4.3e-1346.36Show/hide
Query:  AREQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSS
        AR++ KP   LLTVKQ  GESLR+YI  +N E  QV+GY++G AL  +  GL+  RL  S+ K+ P TY+E +SRA+KY + EE  +SKK     K  SS
Subjt:  AREQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSS

Query:  SDHESKKDKK
         + ++K+D++
Subjt:  SDHESKKDKK

TrEMBL top hitse value%identityAlignment
A0A6A1WQ72 Uncharacterized protein2.4e-0943.04Show/hide
Query:  VKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSE
        +K++ GESLRDY+  FN E L VE   +   L AI  GL D R   S+GK  P T+ EF+ +AQKYM+ E+++ +++ +
Subjt:  VKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSE

A0A6J1D3B7 uncharacterized protein LOC1110166196.2e-1041.35Show/hide
Query:  KPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSSDHES
        +P   LLT+KQ+  ESL+DY+  FN E LQVEG  +   L+   +G++DE+L+ S GK    T++E  SRAQ YMSV EL+ SK+    + +   +D+ +
Subjt:  KPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSSDHES

Query:  KKDK
        K+ +
Subjt:  KKDK

A0A6J1D7D2 uncharacterized protein LOC1110183072.5e-1145.19Show/hide
Query:  REQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSS
        R + +P   LLT+KQ+  ESL DY+  FN E LQVEG     +L+A  + + DE L  S GK  P T++E +SRAQKYMS  E   SK+ E E K+S  +
Subjt:  REQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSS

Query:  DHES
           S
Subjt:  DHES

A0A6J1DWY0 uncharacterized protein LOC1110252931.1e-1145.19Show/hide
Query:  REQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSS
        R + +P   LLT+KQ+  ESLRDY+  FN E LQVEG  +  +L+A  +G+ DE L  S GK  P T++E +SRAQ+YMS  E   SK+ E + KR+   
Subjt:  REQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSS

Query:  DHES
           S
Subjt:  DHES

A0A6J1DZ49 uncharacterized protein LOC1110248511.7e-1243.12Show/hide
Query:  REQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSS
        R + KP   LLT+KQ+  ESL++Y+  FN E LQVEG  +  AL+A  +G++DERL+ S GK  P T+ E +SRAQKYMS  EL+   +     + + S+
Subjt:  REQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSS

Query:  DHESKKDKK
          E + +K+
Subjt:  DHESKKDKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGCAAGAGAACAACACAAGCCTCACATCAATCTCTTAACAGTAAAACAACAGCTAGGTGAGAGCTTGCGTGATTACATAATGCATTTTAACAACGAAGCACTGCA
GGTTGAGGGATACAATGAGGGAGCAGCCCTTGTAGCCATCACAACCGGACTGGAAGATGAGAGACTGCTCAACTCAATGGGTAAGAGCCAACCTCGAACCTATGCTGAGT
TCGTTTCTAGGGCACAGAAGTATATGAGCGTAGAGGAACTACTCAAGTCAAAGAAGTCCGAACGAGAAAACAAGAGGTCTTCTTCATCTGACCACGAAAGTAAGAAGGAC
AAAAAGGCAACGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGCAAGAGAACAACACAAGCCTCACATCAATCTCTTAACAGTAAAACAACAGCTAGGTGAGAGCTTGCGTGATTACATAATGCATTTTAACAACGAAGCACTGCA
GGTTGAGGGATACAATGAGGGAGCAGCCCTTGTAGCCATCACAACCGGACTGGAAGATGAGAGACTGCTCAACTCAATGGGTAAGAGCCAACCTCGAACCTATGCTGAGT
TCGTTTCTAGGGCACAGAAGTATATGAGCGTAGAGGAACTACTCAAGTCAAAGAAGTCCGAACGAGAAAACAAGAGGTCTTCTTCATCTGACCACGAAAGTAAGAAGGAC
AAAAAGGCAACGGATTGA
Protein sequenceShow/hide protein sequence
MRAREQHKPHINLLTVKQQLGESLRDYIMHFNNEALQVEGYNEGAALVAITTGLEDERLLNSMGKSQPRTYAEFVSRAQKYMSVEELLKSKKSERENKRSSSSDHESKKD
KKATD