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Lag0011128 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011128
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr1:15298313..15299671
RNA-Seq ExpressionLag0011128
SyntenyLag0011128
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018810679.2 uncharacterized protein LOC108983489 [Juglans regia]1.0e-1134.03Show/hide
Query:  REVRDKSPPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDY
        RE  D  PP  GW K+NVD++   E  +  +GVV+RD  G+V+L A+ V+  V + E  E  A  R ++    MG+  L++++D +    V  +E V D 
Subjt:  REVRDKSPPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDY

Query:  YDLGALVVDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREE
          L  L+ ++RK + V         +R+GN V H LA  A   E
Subjt:  YDLGALVVDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREE

XP_022139684.1 uncharacterized protein LOC111010533 [Momordica charantia]7.0e-1332.08Show/hide
Query:  FQGGSMLNLLREVRDKSPPEVGWYKVNVDASFRRERWQVGLGV-VVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVA
        FQ  S ++  +      P E G +K+  DASF    +  GLGV ++RD  G+V+  AT    +V S +  E  AAV G+R A+E G+ P++L+TDS+R+ 
Subjt:  FQGGSMLNLLREVRDKSPPEVGWYKVNVDASFRRERWQVGLGV-VVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVA

Query:  GVFQDEAVDDYYDLGALVVDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREEKSKV
         +F  +  +     G+++  ++  +         FT R GN + H LA  AL+ +++ V
Subjt:  GVFQDEAVDDYYDLGALVVDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREEKSKV

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]4.8e-1431.87Show/hide
Query:  PPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDYYDLGALV
        PP+   YK+N DASF       GLG+++R+  G+VM  AT    N++S +M E   AV G++ A ++G+ P++L+TDS R+  +F   + +D  + G +V
Subjt:  PPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDYYDLGALV

Query:  VDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREEKSKVGSGNICMLVESRLRLDAFE
        +  +     S      F  REGN+  H LA  AL   +  +   +  + ++S L ++  E
Subjt:  VDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREEKSKVGSGNICMLVESRLRLDAFE

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]2.9e-1135.56Show/hide
Query:  PPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDYYDLGALV
        PP     KVNVDA+FR+E +  G+GV++RD  G V L A  +       +  EG+A   G+  AVE G     ++TDS+R+  +   + VDD  ++G L 
Subjt:  PPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDYYDLGALV

Query:  VDLRKDIPV-SSLFGCMFTWREGNEVPHQLACLAL
          ++  +   +      FT R GN   H LA LAL
Subjt:  VDLRKDIPV-SSLFGCMFTWREGNEVPHQLACLAL

XP_042950314.1 uncharacterized protein LOC122282427 [Carya illinoinensis]6.5e-1127.23Show/hide
Query:  MAISNKIKIFLWRLCLDRLPTIDN-------------FCFQGGSMLN------------------LLREVRD----KSPPEVGWYKVNVDASFRRERWQV
        M +  KIK+F WR C D LPT+ N             FC      LN                  L ++++     ++PPE G+ KVNVD +   ++ + 
Subjt:  MAISNKIKIFLWRLCLDRLPTIDN-------------FCFQGGSMLN------------------LLREVRD----KSPPEVGWYKVNVDASFRRERWQV

Query:  GLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDYYDLGALVVDLRKDIPVSSLFGCMFTWREG
        G+GVV+RD  G +++ A+ ++  V      E  A +RG++  + +G+  L+++TD + V    Q      Y   G L  D+   +        +   R G
Subjt:  GLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDYYDLGALVVDLRKDIPVSSLFGCMFTWREG

Query:  NEVPHQLACLALREEKSKVGSGNICMLVESRLRLD
        N V H LA  A   E   V    I   V   L  D
Subjt:  NEVPHQLACLALREEKSKVGSGNICMLVESRLRLD

TrEMBL top hitse value%identityAlignment
A0A2I4DU52 uncharacterized protein LOC1089834894.9e-1234.03Show/hide
Query:  REVRDKSPPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDY
        RE  D  PP  GW K+NVD++   E  +  +GVV+RD  G+V+L A+ V+  V + E  E  A  R ++    MG+  L++++D +    V  +E V D 
Subjt:  REVRDKSPPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDY

Query:  YDLGALVVDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREE
          L  L+ ++RK + V         +R+GN V H LA  A   E
Subjt:  YDLGALVVDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREE

A0A5C7GQX3 RNase H domain-containing protein1.2e-1033.12Show/hide
Query:  SPPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVA-GVFQDEAVDDYYDLGA
        +PP+ G +K+N DA+   +    G+GVV+R+F G+VML +    R   SP + E  A + G+R A   G FP VL++D++ V   + ++E++    D+G 
Subjt:  SPPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVA-GVFQDEAVDDYYDLGA

Query:  LVVDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREEKSKVGSGNICMLVES
        ++ D+       + F      R  N+V H LA LAL      V SG+  + VE+
Subjt:  LVVDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREEKSKVGSGNICMLVES

A0A6J1CDQ4 uncharacterized protein LOC1110105333.4e-1332.08Show/hide
Query:  FQGGSMLNLLREVRDKSPPEVGWYKVNVDASFRRERWQVGLGV-VVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVA
        FQ  S ++  +      P E G +K+  DASF    +  GLGV ++RD  G+V+  AT    +V S +  E  AAV G+R A+E G+ P++L+TDS+R+ 
Subjt:  FQGGSMLNLLREVRDKSPPEVGWYKVNVDASFRRERWQVGLGV-VVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVA

Query:  GVFQDEAVDDYYDLGALVVDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREEKSKV
         +F  +  +     G+++  ++  +         FT R GN + H LA  AL+ +++ V
Subjt:  GVFQDEAVDDYYDLGALVVDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREEKSKV

A0A6J1CIF1 uncharacterized protein LOC1110112372.3e-1431.87Show/hide
Query:  PPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDYYDLGALV
        PP+   YK+N DASF       GLG+++R+  G+VM  AT    N++S +M E   AV G++ A ++G+ P++L+TDS R+  +F   + +D  + G +V
Subjt:  PPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDYYDLGALV

Query:  VDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREEKSKVGSGNICMLVESRLRLDAFE
        +  +     S      F  REGN+  H LA  AL   +  +   +  + ++S L ++  E
Subjt:  VDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREEKSKVGSGNICMLVESRLRLDAFE

A0A6J1DBJ7 uncharacterized protein LOC1110189731.4e-1135.56Show/hide
Query:  PPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDYYDLGALV
        PP     KVNVDA+FR+E +  G+GV++RD  G V L A  +       +  EG+A   G+  AVE G     ++TDS+R+  +   + VDD  ++G L 
Subjt:  PPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEMGLFPLVLKTDSIRVAGVFQDEAVDDYYDLGALV

Query:  VDLRKDIPV-SSLFGCMFTWREGNEVPHQLACLAL
          ++  +   +      FT R GN   H LA LAL
Subjt:  VDLRKDIPV-SSLFGCMFTWREGNEVPHQLACLAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTTCGAATAAGATCAAGATTTTCTTATGGAGACTTTGTTTAGACCGTTTGCCTACAATTGATAATTTTTGTTTTCAGGGCGGGTCTATGCTTAATCTCCTGAG
GGAGGTGAGGGATAAGAGTCCCCCGGAGGTTGGATGGTATAAGGTGAATGTAGATGCGTCGTTTAGAAGGGAGCGTTGGCAGGTGGGGTTGGGTGTGGTTGTTAGGGATT
TTGCTGGGCGGGTTATGCTGTTGGCAACGTTGGTGCAGCGGAATGTGCGGAGTCCGGAGATGACCGAAGGATGGGCTGCAGTAAGAGGTATGAGACCGGCGGTGGAGATG
GGTTTGTTCCCATTGGTACTAAAGACTGATTCCATTCGAGTGGCTGGCGTTTTCCAGGATGAGGCAGTGGATGATTATTATGATTTGGGGGCGCTTGTGGTTGATCTACG
GAAGGATATACCAGTGTCTTCTCTCTTCGGATGCATGTTTACTTGGAGAGAGGGGAATGAAGTGCCACACCAGTTGGCTTGTTTGGCGTTGAGGGAGGAAAAATCTAAGG
TTGGGAGTGGAAACATTTGTATGCTAGTGGAGTCTAGGTTGAGGCTGGATGCATTTGAGCACCAGGCTACCTTTATGCATGATATGTTTTGGTGTGTTCTCTGTTATGAT
TGGTTTGATCTCTGTTATGATTGGTTTGAGACCATGCATCTGAGCAATGGACCTATAGTTCATTTGAGCAAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTTCGAATAAGATCAAGATTTTCTTATGGAGACTTTGTTTAGACCGTTTGCCTACAATTGATAATTTTTGTTTTCAGGGCGGGTCTATGCTTAATCTCCTGAG
GGAGGTGAGGGATAAGAGTCCCCCGGAGGTTGGATGGTATAAGGTGAATGTAGATGCGTCGTTTAGAAGGGAGCGTTGGCAGGTGGGGTTGGGTGTGGTTGTTAGGGATT
TTGCTGGGCGGGTTATGCTGTTGGCAACGTTGGTGCAGCGGAATGTGCGGAGTCCGGAGATGACCGAAGGATGGGCTGCAGTAAGAGGTATGAGACCGGCGGTGGAGATG
GGTTTGTTCCCATTGGTACTAAAGACTGATTCCATTCGAGTGGCTGGCGTTTTCCAGGATGAGGCAGTGGATGATTATTATGATTTGGGGGCGCTTGTGGTTGATCTACG
GAAGGATATACCAGTGTCTTCTCTCTTCGGATGCATGTTTACTTGGAGAGAGGGGAATGAAGTGCCACACCAGTTGGCTTGTTTGGCGTTGAGGGAGGAAAAATCTAAGG
TTGGGAGTGGAAACATTTGTATGCTAGTGGAGTCTAGGTTGAGGCTGGATGCATTTGAGCACCAGGCTACCTTTATGCATGATATGTTTTGGTGTGTTCTCTGTTATGAT
TGGTTTGATCTCTGTTATGATTGGTTTGAGACCATGCATCTGAGCAATGGACCTATAGTTCATTTGAGCAAAAGTTAA
Protein sequenceShow/hide protein sequence
MAISNKIKIFLWRLCLDRLPTIDNFCFQGGSMLNLLREVRDKSPPEVGWYKVNVDASFRRERWQVGLGVVVRDFAGRVMLLATLVQRNVRSPEMTEGWAAVRGMRPAVEM
GLFPLVLKTDSIRVAGVFQDEAVDDYYDLGALVVDLRKDIPVSSLFGCMFTWREGNEVPHQLACLALREEKSKVGSGNICMLVESRLRLDAFEHQATFMHDMFWCVLCYD
WFDLCYDWFETMHLSNGPIVHLSKS