; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011131 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011131
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:15314051..15315363
RNA-Seq ExpressionLag0011131
SyntenyLag0011131
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48734.1 hypothetical protein EZV62_024609 [Acer yangbiense]1.6e-2236.72Show/hide
Query:  LCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAK-----LTASVLEVEEVGDTVDSEWAG
        LC+VG+VL+ K +N E F+ V+   W+V     IE  ++NVF+  F++QE++ RVL  G W+FD  L+VL E       L + + +VEE+ +    +  G
Subjt:  LCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAK-----LTASVLEVEEVGDTVDSEWAG

Query:  AIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPII-YERLMDFCYGCGCLGHSRRECGSVGAESHGNKEYGEWLRAGM
            +R+ + +DQ L R  +V+   + E    ++ YERL D C+ CG LGH   EC + GA S     +G WL+AG+
Subjt:  AIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPII-YERLMDFCYGCGCLGHSRRECGSVGAESHGNKEYGEWLRAGM

TXG64010.1 hypothetical protein EZV62_011004 [Acer yangbiense]3.6e-2237.43Show/hide
Query:  LCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEA---------KLTASVLEVEEVGDTVDS
        LC+VG+V+ TK VN EAF  VM+  WRV+ G  IEA + NVFV  FR+ E++  +  +G W+FDR+ +V +EA         K+   V ++ ++G   DS
Subjt:  LCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEA---------KLTASVLEVEEVGDTVDS

Query:  EWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPII-YERLMDFCYGCGCLGHSRRECGSVGAESH--GNKEYGEWLRAGMVFRE
           G    +R+ + +   L R  +V+   E +    ++ YERLMD+C+ C CLGHS REC   G E     +    E L   +V RE
Subjt:  EWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPII-YERLMDFCYGCGCLGHSRRECGSVGAESH--GNKEYGEWLRAGMVFRE

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]6.1e-3032.36Show/hide
Query:  EETKAIRPDEAALPLSVGSWDLCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAKLT---
        +E + +  D     L+  +  LCVV ++ ++KR++ EA RSVM+  WRVH  TR E    N++V+ F+S  EK+RVL++G W F++SL+VL     T   
Subjt:  EETKAIRPDEAALPLSVGSWDLCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAKLT---

Query:  -------------------------------ASVLEVEEV-GDTVDSEWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPIIYERLMDFCYGCGCLG
                                       A + +VEE+ GD  D  WAG    +R+ + + + L RG K+++   ++ WCP+ YE+L DFCY CG +G
Subjt:  -------------------------------ASVLEVEEV-GDTVDSEWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPIIYERLMDFCYGCGCLG

Query:  HSRREC--GSVGAESHGNKEYGEWLRAGMVFREAGRREQEGNMRATEDFSRSRTCEGVRNELRVRRKKQRGVRRI
        HS REC   S    ++  ++YG+WLRA ++ +     E+E   R    F R     G R      R++    R I
Subjt:  HSRREC--GSVGAESHGNKEYGEWLRAGMVFREAGRREQEGNMRATEDFSRSRTCEGVRNELRVRRKKQRGVRRI

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]2.5e-2835.78Show/hide
Query:  EETKAIRPDEAALPLSVGSWDLCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAK-----
        EE   I  D     L+V +  LC VG++  +KR+ +EAF SVM+  W++H  TRIE A  N++V+ F++  EK RV + G W FD+SL++L         
Subjt:  EETKAIRPDEAALPLSVGSWDLCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAK-----

Query:  -----------------------------LTASVLEVEEVGDTVDSEWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPIIYERLMDFCYGCGCLGH
                                     L A + EVEEV      +W      +R+ + + + L RG KV+    ++ WCP+ YERL DFCYGCGC+GH
Subjt:  -----------------------------LTASVLEVEEVGDTVDSEWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPIIYERLMDFCYGCGCLGH

Query:  SRRE
        S RE
Subjt:  SRRE

XP_028117212.1 uncharacterized protein LOC114314884 [Camellia sinensis]3.0e-2130.7Show/hide
Query:  EETKAIRPDEAALPLSVGSWDLCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKE-------
        EE   +  DE  +  +  +  LC+VG++L+ +  N++A RS +   W+   G   +   DN+ ++QF    +K RV+  G W+FD+ LV+LKE       
Subjt:  EETKAIRPDEAALPLSVGSWDLCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKE-------

Query:  AKLTASVLEV---------------------EEVGDTVDSEWA------GAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPIIYERLMDFCYGCGCLGH
        +++T S +E                        +G  VD E+       G    +RI + ID+ L RG K+    +   W  + YERL +FC+ CG LGH
Subjt:  AKLTASVLEV---------------------EEVGDTVDSEWA------GAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPIIYERLMDFCYGCGCLGH

Query:  SRRECGSVGAESHGNKE----YGEWLRA
        S  +CG+   E    +E    YG WLRA
Subjt:  SRRECGSVGAESHGNKE----YGEWLRA

TrEMBL top hitse value%identityAlignment
A0A5C7GVA6 CCHC-type domain-containing protein7.7e-2336.72Show/hide
Query:  LCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAK-----LTASVLEVEEVGDTVDSEWAG
        LC+VG+VL+ K +N E F+ V+   W+V     IE  ++NVF+  F++QE++ RVL  G W+FD  L+VL E       L + + +VEE+ +    +  G
Subjt:  LCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAK-----LTASVLEVEEVGDTVDSEWAG

Query:  AIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPII-YERLMDFCYGCGCLGHSRRECGSVGAESHGNKEYGEWLRAGM
            +R+ + +DQ L R  +V+   + E    ++ YERL D C+ CG LGH   EC + GA S     +G WL+AG+
Subjt:  AIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPII-YERLMDFCYGCGCLGHSRRECGSVGAESHGNKEYGEWLRAGM

A0A5C7I460 Uncharacterized protein1.7e-2237.43Show/hide
Query:  LCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEA---------KLTASVLEVEEVGDTVDS
        LC+VG+V+ TK VN EAF  VM+  WRV+ G  IEA + NVFV  FR+ E++  +  +G W+FDR+ +V +EA         K+   V ++ ++G   DS
Subjt:  LCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEA---------KLTASVLEVEEVGDTVDS

Query:  EWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPII-YERLMDFCYGCGCLGHSRRECGSVGAESH--GNKEYGEWLRAGMVFRE
           G    +R+ + +   L R  +V+   E +    ++ YERLMD+C+ C CLGHS REC   G E     +    E L   +V RE
Subjt:  EWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPII-YERLMDFCYGCGCLGHSRRECGSVGAESH--GNKEYGEWLRAGMVFRE

A0A5C7IMV5 Uncharacterized protein3.2e-2134.27Show/hide
Query:  LCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAKLTASVL-----EVEEVGDTVDSEWAG
        LC+ G++ +   +N EAFRS++   W+V  G  IE   +N++   F+S +++ +VL  G W+FD +L+VL+E     ++      EV EV      +  G
Subjt:  LCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAKLTASVL-----EVEEVGDTVDSEWAG

Query:  AIFCLRIGLRIDQSLCRGFKVEDEAE-REYWCPIIYERLMDFCYGCGCLGHSRRECGSVGAESHGNKE---YGEWLRA
            +R+ + ID+ L R  +V+   +  E   PI YERL +FC+ CG L H+ R C  +G E   N++   YG WL+A
Subjt:  AIFCLRIGLRIDQSLCRGFKVEDEAE-REYWCPIIYERLMDFCYGCGCLGHSRRECGSVGAESHGNKE---YGEWLRA

A0A6J1D765 uncharacterized protein LOC1110179022.9e-3032.36Show/hide
Query:  EETKAIRPDEAALPLSVGSWDLCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAKLT---
        +E + +  D     L+  +  LCVV ++ ++KR++ EA RSVM+  WRVH  TR E    N++V+ F+S  EK+RVL++G W F++SL+VL     T   
Subjt:  EETKAIRPDEAALPLSVGSWDLCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAKLT---

Query:  -------------------------------ASVLEVEEV-GDTVDSEWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPIIYERLMDFCYGCGCLG
                                       A + +VEE+ GD  D  WAG    +R+ + + + L RG K+++   ++ WCP+ YE+L DFCY CG +G
Subjt:  -------------------------------ASVLEVEEV-GDTVDSEWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPIIYERLMDFCYGCGCLG

Query:  HSRREC--GSVGAESHGNKEYGEWLRAGMVFREAGRREQEGNMRATEDFSRSRTCEGVRNELRVRRKKQRGVRRI
        HS REC   S    ++  ++YG+WLRA ++ +     E+E   R    F R     G R      R++    R I
Subjt:  HSRREC--GSVGAESHGNKEYGEWLRAGMVFREAGRREQEGNMRATEDFSRSRTCEGVRNELRVRRKKQRGVRRI

A0A6J1DVS4 uncharacterized protein LOC1110235551.2e-2835.78Show/hide
Query:  EETKAIRPDEAALPLSVGSWDLCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAK-----
        EE   I  D     L+V +  LC VG++  +KR+ +EAF SVM+  W++H  TRIE A  N++V+ F++  EK RV + G W FD+SL++L         
Subjt:  EETKAIRPDEAALPLSVGSWDLCVVGRVLSTKRVNLEAFRSVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAK-----

Query:  -----------------------------LTASVLEVEEVGDTVDSEWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPIIYERLMDFCYGCGCLGH
                                     L A + EVEEV      +W      +R+ + + + L RG KV+    ++ WCP+ YERL DFCYGCGC+GH
Subjt:  -----------------------------LTASVLEVEEVGDTVDSEWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPIIYERLMDFCYGCGCLGH

Query:  SRRE
        S RE
Subjt:  SRRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGACATTAGTTTCTCAGTCCGGTGGCTGGTGAAGTTTTTCTTCGCGGTTGTTAGTCTGTGGTCATCAAGCAGTGGGTTCTGTGTGGGTGTTATTAGCGGTTTCGC
GAGGTCGTTAATCGGAGAGGCGGGTTTTGATCGATTTACTGAGGGGTTGGTGCTGTTTTGTGGTTTTGTGCAGCTCGTGAGCGTTAATGACGCTGATGGGGAGGAGACGA
AGGCGATCCGACCAGATGAAGCGGCGCTACCTCTGTCGGTGGGTTCGTGGGATTTGTGCGTAGTGGGTCGGGTGTTGTCGACAAAGAGGGTGAATCTAGAAGCTTTCCGT
TCAGTGATGAGGGGGGCCTGGCGTGTGCATGTGGGGACAAGGATTGAGGCTGCCAAAGATAATGTATTTGTGGTACAATTTCGGTCGCAAGAGGAGAAGGCGAGAGTGTT
GGCTACGGGTCTTTGGGCTTTTGACCGATCTCTGGTAGTGCTGAAGGAGGCAAAGTTGACGGCTTCAGTGCTTGAGGTGGAAGAGGTGGGTGACACAGTGGATAGTGAGT
GGGCGGGTGCGATTTTTTGTTTGAGGATTGGTTTGAGAATTGATCAGTCGTTATGTAGAGGATTTAAGGTGGAGGATGAGGCGGAGAGAGAGTACTGGTGCCCAATTATC
TATGAACGGCTTATGGATTTTTGTTATGGATGCGGTTGCCTAGGGCACTCGAGGAGGGAATGTGGTTCAGTAGGAGCTGAGTCTCATGGGAACAAGGAGTATGGTGAGTG
GCTGAGGGCGGGGATGGTGTTTAGAGAGGCTGGGCGAAGGGAGCAGGAGGGGAACATGAGAGCTACTGAGGACTTTTCCAGGAGTCGAACATGCGAGGGAGTGAGGAACG
AGTTGAGAGTGCGGAGAAAGAAGCAGAGGGGGGTGCGACGGATCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGACATTAGTTTCTCAGTCCGGTGGCTGGTGAAGTTTTTCTTCGCGGTTGTTAGTCTGTGGTCATCAAGCAGTGGGTTCTGTGTGGGTGTTATTAGCGGTTTCGC
GAGGTCGTTAATCGGAGAGGCGGGTTTTGATCGATTTACTGAGGGGTTGGTGCTGTTTTGTGGTTTTGTGCAGCTCGTGAGCGTTAATGACGCTGATGGGGAGGAGACGA
AGGCGATCCGACCAGATGAAGCGGCGCTACCTCTGTCGGTGGGTTCGTGGGATTTGTGCGTAGTGGGTCGGGTGTTGTCGACAAAGAGGGTGAATCTAGAAGCTTTCCGT
TCAGTGATGAGGGGGGCCTGGCGTGTGCATGTGGGGACAAGGATTGAGGCTGCCAAAGATAATGTATTTGTGGTACAATTTCGGTCGCAAGAGGAGAAGGCGAGAGTGTT
GGCTACGGGTCTTTGGGCTTTTGACCGATCTCTGGTAGTGCTGAAGGAGGCAAAGTTGACGGCTTCAGTGCTTGAGGTGGAAGAGGTGGGTGACACAGTGGATAGTGAGT
GGGCGGGTGCGATTTTTTGTTTGAGGATTGGTTTGAGAATTGATCAGTCGTTATGTAGAGGATTTAAGGTGGAGGATGAGGCGGAGAGAGAGTACTGGTGCCCAATTATC
TATGAACGGCTTATGGATTTTTGTTATGGATGCGGTTGCCTAGGGCACTCGAGGAGGGAATGTGGTTCAGTAGGAGCTGAGTCTCATGGGAACAAGGAGTATGGTGAGTG
GCTGAGGGCGGGGATGGTGTTTAGAGAGGCTGGGCGAAGGGAGCAGGAGGGGAACATGAGAGCTACTGAGGACTTTTCCAGGAGTCGAACATGCGAGGGAGTGAGGAACG
AGTTGAGAGTGCGGAGAAAGAAGCAGAGGGGGGTGCGACGGATCCTATGA
Protein sequenceShow/hide protein sequence
MVDISFSVRWLVKFFFAVVSLWSSSSGFCVGVISGFARSLIGEAGFDRFTEGLVLFCGFVQLVSVNDADGEETKAIRPDEAALPLSVGSWDLCVVGRVLSTKRVNLEAFR
SVMRGAWRVHVGTRIEAAKDNVFVVQFRSQEEKARVLATGLWAFDRSLVVLKEAKLTASVLEVEEVGDTVDSEWAGAIFCLRIGLRIDQSLCRGFKVEDEAEREYWCPII
YERLMDFCYGCGCLGHSRRECGSVGAESHGNKEYGEWLRAGMVFREAGRREQEGNMRATEDFSRSRTCEGVRNELRVRRKKQRGVRRIL