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Lag0011139 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011139
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:15535688..15536449
RNA-Seq ExpressionLag0011139
SyntenyLag0011139
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.9e-2332.48Show/hide
Query:  SNDQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPN
        +   L   L   A  GA W VS  G  + + + +TP A VW  F+++RLLP T   TVSK RMLL+ S++   SI+VGR+I  EI +CA +K+G LFFP+
Subjt:  SNDQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPN

Query:  LITTLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGDQKGRKNST----------------------VASGIEEILKHQR----ELLHQVQYQGEQQRLY
        LIT LC  A      ++E + + G ID+  +  +   Q+G   ST                          +E+ L  Q      ++  +Q+  +QQ+ +
Subjt:  LITTLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGDQKGRKNST----------------------VASGIEEILKHQR----ELLHQVQYQGEQQRLY

Query:  WEYALKGDEMVEKAFNSDPEEVLPPFPPFPKGVL
        W Y+ + D  ++KA  ++    +P FP FP+ +L
Subjt:  WEYALKGDEMVEKAFNSDPEEVLPPFPPFPKGVL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]3.6e-2034.67Show/hide
Query:  VTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLITTLCLKANVQVSEDDEIMMDKGIIDSTTINC
        +TP A VW  F+++RLLP T   TVSK RMLL++S+++  SI+VGR+I  EI +CA +KSG LFFP+LIT LC  A      ++E +   G ID+  +  
Subjt:  VTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLITTLCLKANVQVSEDDEIMMDKGIIDSTTINC

Query:  L-------MGDQKGRKNSTVAS-------------GIEEILKHQR----ELLHQVQYQGEQQRLYWEYALKGDEMVEKAFNSDPEEVLPPFPPFPKGVL
        +       +  Q      TVAS              +E+ L  Q      ++  +Q+  +QQ+ +W Y+ + D  ++KA  ++    +P FP FP+ +L
Subjt:  L-------MGDQKGRKNSTVAS-------------GIEEILKHQR----ELLHQVQYQGEQQRLYWEYALKGDEMVEKAFNSDPEEVLPPFPPFPKGVL

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]6.7e-1934.62Show/hide
Query:  APSNDQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFF
        A +  +L   L   A+ GA W VS  G  + L + + P A VW  F+++RLLP T   TVSK R+LL++S+++  SI+VG+II REI + A +KSG LFF
Subjt:  APSNDQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFF

Query:  PNLITTLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGD---------QKGRKNSTVASGIEEILKHQRELLHQVQYQGEQQ
        P+LIT +C  A      ++E + + G ID+  +  +  +            R  +  +S   E L+  + L  ++  Q  QQ
Subjt:  PNLITTLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGD---------QKGRKNSTVASGIEEILKHQRELLHQVQYQGEQQ

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.6e-2335Show/hide
Query:  QLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLIT
        +L   L   A  GA W VS  G  + + + +TP A VW  F+++RLLP T    VSK RMLL+ S+++  SI+VGR+I  EI +CA +K+G LFFP+LIT
Subjt:  QLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLIT

Query:  TLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGDQKGRKNST---------------VASGIEEILKHQRELLHQVQYQGEQQRLYWEYALKGDEMVEKA
         LC  A   V+E  E + + G ID+  +  +   Q+G   ST                   + + LK   + L Q ++  +QQ+ +W Y+ + D  ++KA
Subjt:  TLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGDQKGRKNST---------------VASGIEEILKHQRELLHQVQYQGEQQRLYWEYALKGDEMVEKA

Query:  FNSDPEEVLPPFPPFPKGVL
          ++    +P FP FP+ +L
Subjt:  FNSDPEEVLPPFPPFPKGVL

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]1.5e-1844.55Show/hide
Query:  DQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLI
        D LQ  L+     G+ W + K G+ S    Y+ P ANVW +FV+   +P +   T+S  RMLL+++I+++ SI+VG+II +EI +CA+KK+G ++FP+LI
Subjt:  DQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLI

Query:  TTLCLKANVQ
        T+LCLKA V+
Subjt:  TTLCLKANVQ

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)2.8e-2332.48Show/hide
Query:  SNDQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPN
        +   L   L   A  GA W VS  G  + + + +TP A VW  F+++RLLP T   TVSK RMLL+ S++   SI+VGR+I  EI +CA +K+G LFFP+
Subjt:  SNDQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPN

Query:  LITTLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGDQKGRKNST----------------------VASGIEEILKHQR----ELLHQVQYQGEQQRLY
        LIT LC  A      ++E + + G ID+  +  +   Q+G   ST                          +E+ L  Q      ++  +Q+  +QQ+ +
Subjt:  LITTLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGDQKGRKNST----------------------VASGIEEILKHQR----ELLHQVQYQGEQQRLY

Query:  WEYALKGDEMVEKAFNSDPEEVLPPFPPFPKGVL
        W Y+ + D  ++KA  ++    +P FP FP+ +L
Subjt:  WEYALKGDEMVEKAFNSDPEEVLPPFPPFPKGVL

A0A2P5CEY2 Uncharacterized protein1.7e-2034.67Show/hide
Query:  VTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLITTLCLKANVQVSEDDEIMMDKGIIDSTTINC
        +TP A VW  F+++RLLP T   TVSK RMLL++S+++  SI+VGR+I  EI +CA +KSG LFFP+LIT LC  A      ++E +   G ID+  +  
Subjt:  VTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLITTLCLKANVQVSEDDEIMMDKGIIDSTTINC

Query:  L-------MGDQKGRKNSTVAS-------------GIEEILKHQR----ELLHQVQYQGEQQRLYWEYALKGDEMVEKAFNSDPEEVLPPFPPFPKGVL
        +       +  Q      TVAS              +E+ L  Q      ++  +Q+  +QQ+ +W Y+ + D  ++KA  ++    +P FP FP+ +L
Subjt:  L-------MGDQKGRKNSTVAS-------------GIEEILKHQR----ELLHQVQYQGEQQRLYWEYALKGDEMVEKAFNSDPEEVLPPFPPFPKGVL

A0A2P5CPE8 Uncharacterized protein3.3e-1934.62Show/hide
Query:  APSNDQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFF
        A +  +L   L   A+ GA W VS  G  + L + + P A VW  F+++RLLP T   TVSK R+LL++S+++  SI+VG+II REI + A +KSG LFF
Subjt:  APSNDQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFF

Query:  PNLITTLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGD---------QKGRKNSTVASGIEEILKHQRELLHQVQYQGEQQ
        P+LIT +C  A      ++E + + G ID+  +  +  +            R  +  +S   E L+  + L  ++  Q  QQ
Subjt:  PNLITTLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGD---------QKGRKNSTVASGIEEILKHQRELLHQVQYQGEQQ

A0A2P5DXM3 Uncharacterized protein1.3e-2335Show/hide
Query:  QLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLIT
        +L   L   A  GA W VS  G  + + + +TP A VW  F+++RLLP T    VSK RMLL+ S+++  SI+VGR+I  EI +CA +K+G LFFP+LIT
Subjt:  QLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLIT

Query:  TLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGDQKGRKNST---------------VASGIEEILKHQRELLHQVQYQGEQQRLYWEYALKGDEMVEKA
         LC  A   V+E  E + + G ID+  +  +   Q+G   ST                   + + LK   + L Q ++  +QQ+ +W Y+ + D  ++KA
Subjt:  TLCLKANVQVSEDDEIMMDKGIIDSTTINCLMGDQKGRKNST---------------VASGIEEILKHQRELLHQVQYQGEQQRLYWEYALKGDEMVEKA

Query:  FNSDPEEVLPPFPPFPKGVL
          ++    +P FP FP+ +L
Subjt:  FNSDPEEVLPPFPPFPKGVL

A0A5D2MA47 Uncharacterized protein7.2e-1944.55Show/hide
Query:  DQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLI
        D LQ  L+     G+ W + K G+ S    Y+ P ANVW +FV+   +P +   T+S  RMLL+++I+++ SI+VG+II +EI +CA+KK+G ++FP+LI
Subjt:  DQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLI

Query:  TTLCLKANVQ
        T+LCLKA V+
Subjt:  TTLCLKANVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTGCGCCCTCCAACGATCAACTTCAAGCAGCCTTGAACTACTGTGCTTTAGAGGGGGCGAGTTGGAAGGTGTCAAAGAATGGGAACCGATCCATGTTGTCTGC
ATATGTCACGCCCGAAGCTAATGTTTGGTTGTGGTTTGTTCGCAACCGATTGCTTCCACCGACACAAGACACCACTGTATCTAAGGCGAGGATGCTCCTTATTTTCTCCA
TAATGAGCCAAATCAGTATTGATGTGGGGAGAATTATTGCTCGAGAGATAGCATCGTGTGCTCGTAAGAAGTCAGGAAGGTTGTTTTTCCCGAACCTCATCACAACCCTC
TGTTTAAAGGCCAATGTGCAAGTTTCGGAAGATGATGAAATTATGATGGATAAGGGAATCATCGACTCGACAACTATCAACTGCCTCATGGGGGACCAAAAGGGGAGAAA
GAATTCAACTGTTGCAAGTGGCATAGAGGAAATACTCAAGCACCAAAGGGAATTATTGCACCAAGTGCAATATCAAGGAGAACAACAACGTCTATATTGGGAGTACGCCC
TTAAGGGGGACGAGATGGTAGAAAAAGCATTTAATTCGGATCCAGAAGAAGTCCTTCCACCATTCCCTCCATTCCCAAAAGGAGTATTGAATCGGTGGTGCCCCCCTCAT
CCGGAGATGATGATGATGATGAAGTCTGAGCAGGGGAGTTTGTTGTTTTATGTTTTTGTTTGTGGTTGTTGGTGTTTTTGCTTCAAGCTATGGCTGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTGCGCCCTCCAACGATCAACTTCAAGCAGCCTTGAACTACTGTGCTTTAGAGGGGGCGAGTTGGAAGGTGTCAAAGAATGGGAACCGATCCATGTTGTCTGC
ATATGTCACGCCCGAAGCTAATGTTTGGTTGTGGTTTGTTCGCAACCGATTGCTTCCACCGACACAAGACACCACTGTATCTAAGGCGAGGATGCTCCTTATTTTCTCCA
TAATGAGCCAAATCAGTATTGATGTGGGGAGAATTATTGCTCGAGAGATAGCATCGTGTGCTCGTAAGAAGTCAGGAAGGTTGTTTTTCCCGAACCTCATCACAACCCTC
TGTTTAAAGGCCAATGTGCAAGTTTCGGAAGATGATGAAATTATGATGGATAAGGGAATCATCGACTCGACAACTATCAACTGCCTCATGGGGGACCAAAAGGGGAGAAA
GAATTCAACTGTTGCAAGTGGCATAGAGGAAATACTCAAGCACCAAAGGGAATTATTGCACCAAGTGCAATATCAAGGAGAACAACAACGTCTATATTGGGAGTACGCCC
TTAAGGGGGACGAGATGGTAGAAAAAGCATTTAATTCGGATCCAGAAGAAGTCCTTCCACCATTCCCTCCATTCCCAAAAGGAGTATTGAATCGGTGGTGCCCCCCTCAT
CCGGAGATGATGATGATGATGAAGTCTGAGCAGGGGAGTTTGTTGTTTTATGTTTTTGTTTGTGGTTGTTGGTGTTTTTGCTTCAAGCTATGGCTGTTTTAA
Protein sequenceShow/hide protein sequence
MEIAPSNDQLQAALNYCALEGASWKVSKNGNRSMLSAYVTPEANVWLWFVRNRLLPPTQDTTVSKARMLLIFSIMSQISIDVGRIIAREIASCARKKSGRLFFPNLITTL
CLKANVQVSEDDEIMMDKGIIDSTTINCLMGDQKGRKNSTVASGIEEILKHQRELLHQVQYQGEQQRLYWEYALKGDEMVEKAFNSDPEEVLPPFPPFPKGVLNRWCPPH
PEMMMMMKSEQGSLLFYVFVCGCWCFCFKLWLF