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Lag0011145 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011145
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:15790837..15795260
RNA-Seq ExpressionLag0011145
SyntenyLag0011145
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]8.7e-1268.52Show/hide
Query:  PTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP
        PTEELE VPL S E++V+IGT+LGA  R+ LI FLR+N+D+FAWSHEDM  IDP
Subjt:  PTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP

XP_022154846.1 uncharacterized protein LOC111022006 [Momordica charantia]6.7e-1270.37Show/hide
Query:  PTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP
        PTEELE VPL S E+ VNIGT+L A  R  LI+FLR+N+D+FAWSHEDM GIDP
Subjt:  PTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]1.2e-1369.64Show/hide
Query:  RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGID
        RG+P EE+E VPLT+E+RRVNIGT+LG+E+R+ LI+FLR+NAD+F WS EDM GID
Subjt:  RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGID

XP_022158042.1 uncharacterized protein LOC111024621 [Momordica charantia]4.6e-1367.86Show/hide
Query:  RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGID
        RG+PT+E+E +PLTS++RRVNIGTRLG ++R  LI FLR+N D+FAWSHEDM GI+
Subjt:  RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGID

XP_022159205.1 uncharacterized protein LOC111025624 [Momordica charantia]7.9e-1358.57Show/hide
Query:  DPCVPDAVGPDP-RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP
        +PC  +   PDP RG P EELE VPL   E++V+IG+RL AE ++ L+ FL+ANAD+FAWSH+DM GIDP
Subjt:  DPCVPDAVGPDP-RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP

TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H4.2e-1268.52Show/hide
Query:  PTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP
        PTEELE VPL S E++V+IGT+LGA  R+ LI FLR+N+D+FAWSHEDM  IDP
Subjt:  PTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP

A0A6J1DPX9 uncharacterized protein LOC1110220063.2e-1270.37Show/hide
Query:  PTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP
        PTEELE VPL S E+ VNIGT+L A  R  LI+FLR+N+D+FAWSHEDM GIDP
Subjt:  PTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP

A0A6J1DVC6 Ribonuclease H5.9e-1469.64Show/hide
Query:  RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGID
        RG+P EE+E VPLT+E+RRVNIGT+LG+E+R+ LI+FLR+NAD+F WS EDM GID
Subjt:  RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGID

A0A6J1DW49 uncharacterized protein LOC1110246212.2e-1367.86Show/hide
Query:  RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGID
        RG+PT+E+E +PLTS++RRVNIGTRLG ++R  LI FLR+N D+FAWSHEDM GI+
Subjt:  RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGID

A0A6J1DY08 uncharacterized protein LOC1110256243.8e-1358.57Show/hide
Query:  DPCVPDAVGPDP-RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP
        +PC  +   PDP RG P EELE VPL   E++V+IG+RL AE ++ L+ FL+ANAD+FAWSH+DM GIDP
Subjt:  DPCVPDAVGPDP-RGQPTEELEYVPLTSEERRVNIGTRLGAEQRDRLIDFLRANADLFAWSHEDMSGIDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTGCTTTACCGCTTTTAAAGTATGTGTTTGAATTGCATGCTATTGTGGTTGTTTGTTGTGTGTTGCTCACCGGGTGTGAGCTACTTACCAGTACAGTGGTTAT
ACTGATACCCCCCTTTCTTCGCCCAACATTCTCAGATTATGCAAGTGATAAGCTTTATGTGCCCGGTGATGTGGTTGAGGAGTGTTTCCTCTACCCGTTTTGGGGGTTCT
TCAACCCGAACAGTAGAGGCCTAGGATTGTTCAATTCGAGCACAGACTTGGCATTATCATTCATTGCTTCAGTAGACTATATTCTTTTATTGATCGATGCAGCTCTGATC
AATTGTGACCAACCGACGGCCCGTGGTCAGAGAGCTGACGAGGACAATTGGGCAGAGGTAGGACCAAAAGACCGACCCAGAGGAAGACTGGACCAAAGGGTCGGGCCAAC
GAGGCCGACCATTAGGCCCGCTTCCGCGGTCCAGCCTGGTGGCCTCTTTTGGTCCCTGATGTCCCGGATCGCCCCGGTTCCTCCTGCTTCTCCTCGGTTTTCTGACTTAG
GCATCGGAGGCGGTGTGACCTACACCACGACGATGTGCAGTGGTTTTTGCTGGTCTTGCAGGTCACGTCTTCCCCAGTTTCTACAAATTCACCGTTGGTGTCACGTGAAG
GACAGACGAGTCTTCTATCCGGATTTTGGCATCAACAGTTGGCGCCGTCTATGGGGAGGAGGTGCTTGCCAGCTCAAACCCGTGCCGGTTGTGATCTGTATGATGGATCG
AGTTCAGAAACCGGAAGGAAACCTCGGGTATGAGCAGAAAACGCCGAACCAGACTGGGGCTGACCTTTGTAGGGAAAAGGCCGACCCTAACTTTAGAAATTGTTGTAAGG
ATCCGTGTGTCCCCGATGCTGTTGGACCTGACCCAAGAGGACAGCCAACAGAAGAACTGGAGTATGTGCCACTAACATCCGAGGAAAGGAGGGTGAACATCGGCACTAGA
CTGGGGGCTGAGCAGAGGGACAGACTGATCGATTTCTTGAGGGCTAATGCAGATTTGTTTGCATGGTCACACGAAGATATGTCGGGAATTGACCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGTGCTTTACCGCTTTTAAAGTATGTGTTTGAATTGCATGCTATTGTGGTTGTTTGTTGTGTGTTGCTCACCGGGTGTGAGCTACTTACCAGTACAGTGGTTAT
ACTGATACCCCCCTTTCTTCGCCCAACATTCTCAGATTATGCAAGTGATAAGCTTTATGTGCCCGGTGATGTGGTTGAGGAGTGTTTCCTCTACCCGTTTTGGGGGTTCT
TCAACCCGAACAGTAGAGGCCTAGGATTGTTCAATTCGAGCACAGACTTGGCATTATCATTCATTGCTTCAGTAGACTATATTCTTTTATTGATCGATGCAGCTCTGATC
AATTGTGACCAACCGACGGCCCGTGGTCAGAGAGCTGACGAGGACAATTGGGCAGAGGTAGGACCAAAAGACCGACCCAGAGGAAGACTGGACCAAAGGGTCGGGCCAAC
GAGGCCGACCATTAGGCCCGCTTCCGCGGTCCAGCCTGGTGGCCTCTTTTGGTCCCTGATGTCCCGGATCGCCCCGGTTCCTCCTGCTTCTCCTCGGTTTTCTGACTTAG
GCATCGGAGGCGGTGTGACCTACACCACGACGATGTGCAGTGGTTTTTGCTGGTCTTGCAGGTCACGTCTTCCCCAGTTTCTACAAATTCACCGTTGGTGTCACGTGAAG
GACAGACGAGTCTTCTATCCGGATTTTGGCATCAACAGTTGGCGCCGTCTATGGGGAGGAGGTGCTTGCCAGCTCAAACCCGTGCCGGTTGTGATCTGTATGATGGATCG
AGTTCAGAAACCGGAAGGAAACCTCGGGTATGAGCAGAAAACGCCGAACCAGACTGGGGCTGACCTTTGTAGGGAAAAGGCCGACCCTAACTTTAGAAATTGTTGTAAGG
ATCCGTGTGTCCCCGATGCTGTTGGACCTGACCCAAGAGGACAGCCAACAGAAGAACTGGAGTATGTGCCACTAACATCCGAGGAAAGGAGGGTGAACATCGGCACTAGA
CTGGGGGCTGAGCAGAGGGACAGACTGATCGATTTCTTGAGGGCTAATGCAGATTTGTTTGCATGGTCACACGAAGATATGTCGGGAATTGACCCGTAA
Protein sequenceShow/hide protein sequence
MLGALPLLKYVFELHAIVVVCCVLLTGCELLTSTVVILIPPFLRPTFSDYASDKLYVPGDVVEECFLYPFWGFFNPNSRGLGLFNSSTDLALSFIASVDYILLLIDAALI
NCDQPTARGQRADEDNWAEVGPKDRPRGRLDQRVGPTRPTIRPASAVQPGGLFWSLMSRIAPVPPASPRFSDLGIGGGVTYTTTMCSGFCWSCRSRLPQFLQIHRWCHVK
DRRVFYPDFGINSWRRLWGGGACQLKPVPVVICMMDRVQKPEGNLGYEQKTPNQTGADLCREKADPNFRNCCKDPCVPDAVGPDPRGQPTEELEYVPLTSEERRVNIGTR
LGAEQRDRLIDFLRANADLFAWSHEDMSGIDP