; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011216 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011216
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr1:17958507..17974916
RNA-Seq ExpressionLag0011216
SyntenyLag0011216
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK03842.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]6.3e-12461.78Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFIE LPKA G   I+VVVDRLSKY +F+ +KHPF+ K+VA  FI ++VR HG PKSI+SDRDKIF+S+FW ELF    T LK+ST FH QTDGQ+E +
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+CLETYLRCFC E P KW ++IPWAE WYNTT+H S  TT F  +YGRPPPPL+SYG+ KT N+ +E  L ERD  I ALK+ L +A+NRMKKFAD KR
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL
        RE+ F+VGD V+LK+ PYRQ+SLA++  EKL+PKY+GPY I+E +GEVAY L+LP EASIH+VFH+SQLK  LG    VQ   P L   FE  L  E+VL
Subjt:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL

Query:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL
        G+RW+ EL  +EWL+KW+GL D +A WE V ++  QFP FHL DKV+L
Subjt:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL

TYK15071.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-12362.07Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFIE LPKA G   I+VVVDRLSKY +F+ +KHPF+ K+VA  FI ++VR HG PKSI+SDRDKIF+S+FW ELF    T LK+ST FH QTDGQ+E V
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+CLETYLRCFC E P KW ++IPWAE WYNTT+H S  TT F  +YGRPPPPL+SYG+ KT N+ +E  L ERD  I ALK+ L +A+NRMKKFAD KR
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL
        RE+ F+VGD V+LK+ PYRQ+SLA++  EKL+PKY+GPY I E +GEVAY L+LP EASIH+VFH+SQLK  LG    VQ   P L   FE  L  E+VL
Subjt:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL

Query:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL
        G+RW+ EL  +EWL+KW+GL D +A WE V ++  QFP FHL DKV+L
Subjt:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL

TYK21035.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]6.3e-12462.07Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFIE LPKA G   I+VVVDRLSKY +F+ +KHPF+ K+VA  FI ++VR HG PKSI+SDRDKIF+S+FW ELF    T LK+ST FH QTDGQ+E V
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+CLETYLRCFC E P KW ++IPWAE WYNTT+H S  TT F  +YGRPPPPL+SYG+ KT N+ +E  L ERD  I ALK+ L +A+NRMKKFAD KR
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL
        RE+ F+VGD V+LK+ PYRQ+SLA++  EKL+PKY+GPY I+E +GEVAY L+LP EASIH+VFH+SQLK  LG    VQ   P L   FE  L  E+VL
Subjt:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL

Query:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL
        G+RW+ EL  +EWL+KW+GL D +A WE V ++  QFP FHL DKV+L
Subjt:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL

TYK27058.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]6.3e-12462.07Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFIE LPKA G   I+VVVDRLSKY +F+ +KHPF+ K+VA  FI ++VR HG PKSI+SDRDKIF+S+FW ELF    T LK+ST FH QTDGQ+E V
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+CLETYLRCFC E P KW ++IPWAE WYNTT+H S  TT F  +YGRPPPPL+SYG+ KT N+ +E  L ERD  I ALK+ L +A+NRMKKFAD KR
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL
        RE+ F+VGD V+LK+ PYRQ+SLA++  EKL+PKY+GPY I+E +GEVAY L+LP EASIH+VFH+SQLK  LG    VQ   P L   FE  L  E+VL
Subjt:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL

Query:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL
        G+RW+ EL  +EWL+KW+GL D +A WE V ++  QFP FHL DKV+L
Subjt:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL

TYK27963.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]6.3e-12462.07Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFIE LPKA G   I+VVVDRLSKY +F+ +KHPF+ K+VA  FI ++VR HG PKSI+SDRDKIF+S+FW ELF    T LK+ST FH QTDGQ+E V
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+CLETYLRCFC E P KW ++IPWAE WYNTT+H S  TT F  +YGRPPPPL+SYG+ KT N+ +E  L ERD  I ALK+ L +A+NRMKKFAD KR
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL
        RE+ F+VGD V+LK+ PYRQ+SLA++  EKL+PKY+GPY I+E +GEVAY L+LP EASIH+VFH+SQLK  LG    VQ   P L   FE  L  E+VL
Subjt:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL

Query:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL
        G+RW+ EL  +EWL+KW+GL D +A WE V ++  QFP FHL DKV+L
Subjt:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL

TrEMBL top hitse value%identityAlignment
A0A5D3BYA1 Ty3/gypsy retrotransposon protein3.1e-12461.78Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFIE LPKA G   I+VVVDRLSKY +F+ +KHPF+ K+VA  FI ++VR HG PKSI+SDRDKIF+S+FW ELF    T LK+ST FH QTDGQ+E +
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+CLETYLRCFC E P KW ++IPWAE WYNTT+H S  TT F  +YGRPPPPL+SYG+ KT N+ +E  L ERD  I ALK+ L +A+NRMKKFAD KR
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL
        RE+ F+VGD V+LK+ PYRQ+SLA++  EKL+PKY+GPY I+E +GEVAY L+LP EASIH+VFH+SQLK  LG    VQ   P L   FE  L  E+VL
Subjt:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL

Query:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL
        G+RW+ EL  +EWL+KW+GL D +A WE V ++  QFP FHL DKV+L
Subjt:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL

A0A5D3CT96 Ty3/gypsy retrotransposon protein6.8e-12462.07Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFIE LPKA G   I+VVVDRLSKY +F+ +KHPF+ K+VA  FI ++VR HG PKSI+SDRDKIF+S+FW ELF    T LK+ST FH QTDGQ+E V
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+CLETYLRCFC E P KW ++IPWAE WYNTT+H S  TT F  +YGRPPPPL+SYG+ KT N+ +E  L ERD  I ALK+ L +A+NRMKKFAD KR
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL
        RE+ F+VGD V+LK+ PYRQ+SLA++  EKL+PKY+GPY I E +GEVAY L+LP EASIH+VFH+SQLK  LG    VQ   P L   FE  L  E+VL
Subjt:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL

Query:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL
        G+RW+ EL  +EWL+KW+GL D +A WE V ++  QFP FHL DKV+L
Subjt:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL

A0A5D3DU86 Ty3/gypsy retrotransposon protein3.1e-12462.07Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFIE LPKA G   I+VVVDRLSKY +F+ +KHPF+ K+VA  FI ++VR HG PKSI+SDRDKIF+S+FW ELF    T LK+ST FH QTDGQ+E V
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+CLETYLRCFC E P KW ++IPWAE WYNTT+H S  TT F  +YGRPPPPL+SYG+ KT N+ +E  L ERD  I ALK+ L +A+NRMKKFAD KR
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL
        RE+ F+VGD V+LK+ PYRQ+SLA++  EKL+PKY+GPY I+E +GEVAY L+LP EASIH+VFH+SQLK  LG    VQ   P L   FE  L  E+VL
Subjt:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL

Query:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL
        G+RW+ EL  +EWL+KW+GL D +A WE V ++  QFP FHL DKV+L
Subjt:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL

A0A5D3DWA9 Ty3/gypsy retrotransposon protein3.1e-12462.07Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFIE LPKA G   I+VVVDRLSKY +F+ +KHPF+ K+VA  FI ++VR HG PKSI+SDRDKIF+S+FW ELF    T LK+ST FH QTDGQ+E V
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+CLETYLRCFC E P KW ++IPWAE WYNTT+H S  TT F  +YGRPPPPL+SYG+ KT N+ +E  L ERD  I ALK+ L +A+NRMKKFAD KR
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL
        RE+ F+VGD V+LK+ PYRQ+SLA++  EKL+PKY+GPY I+E +GEVAY L+LP EASIH+VFH+SQLK  LG    VQ   P L   FE  L  E+VL
Subjt:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL

Query:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL
        G+RW+ EL  +EWL+KW+GL D +A WE V ++  QFP FHL DKV+L
Subjt:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL

A0A5D3E325 Ty3/gypsy retrotransposon protein3.1e-12462.07Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFIE LPKA G   I+VVVDRLSKY +F+ +KHPF+ K+VA  FI ++VR HG PKSI+SDRDKIF+S+FW ELF    T LK+ST FH QTDGQ+E V
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+CLETYLRCFC E P KW ++IPWAE WYNTT+H S  TT F  +YGRPPPPL+SYG+ KT N+ +E  L ERD  I ALK+ L +A+NRMKKFAD KR
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTT-FSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL
        RE+ F+VGD V+LK+ PYRQ+SLA++  EKL+PKY+GPY I+E +GEVAY L+LP EASIH+VFH+SQLK  LG    VQ   P L   FE  L  E+VL
Subjt:  REVSFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVL

Query:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL
        G+RW+ EL  +EWL+KW+GL D +A WE V ++  QFP FHL DKV+L
Subjt:  GMRWNSELIQDEWLIKWEGLQDCDALWEYVNTIRDQFPQFHLGDKVLL

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.4e-3332.12Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFI  LP+++G+  + VVVDR SK    +P     T ++ A +F + V+   G PK I++D D IF S  W +        +K S  +  QTDGQ+E  
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISIN-TTFSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+ +E  LRC C  +P  W++ I   +  YN   H +   T F I++     P LS  E  + ++  ++   E  +V   +K+ L     +MKK+ D K 
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISIN-TTFSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REV-SFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELP--VEASIHDVFHVSQLKK
        +E+  F+ GD V +K    R ++       KL+P + GP+ + ++ G   Y L+LP  ++      FHVS L+K
Subjt:  REV-SFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELP--VEASIHDVFHVSQLKK

P0CT35 Transposon Tf2-2 polyprotein1.4e-3332.12Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFI  LP+++G+  + VVVDR SK    +P     T ++ A +F + V+   G PK I++D D IF S  W +        +K S  +  QTDGQ+E  
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISIN-TTFSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+ +E  LRC C  +P  W++ I   +  YN   H +   T F I++     P LS  E  + ++  ++   E  +V   +K+ L     +MKK+ D K 
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISIN-TTFSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REV-SFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELP--VEASIHDVFHVSQLKK
        +E+  F+ GD V +K    R ++       KL+P + GP+ + ++ G   Y L+LP  ++      FHVS L+K
Subjt:  REV-SFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELP--VEASIHDVFHVSQLKK

P0CT36 Transposon Tf2-3 polyprotein1.4e-3332.12Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFI  LP+++G+  + VVVDR SK    +P     T ++ A +F + V+   G PK I++D D IF S  W +        +K S  +  QTDGQ+E  
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISIN-TTFSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+ +E  LRC C  +P  W++ I   +  YN   H +   T F I++     P LS  E  + ++  ++   E  +V   +K+ L     +MKK+ D K 
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISIN-TTFSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REV-SFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELP--VEASIHDVFHVSQLKK
        +E+  F+ GD V +K    R ++       KL+P + GP+ + ++ G   Y L+LP  ++      FHVS L+K
Subjt:  REV-SFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELP--VEASIHDVFHVSQLKK

P0CT41 Transposon Tf2-12 polyprotein1.4e-3332.12Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFI  LP+++G+  + VVVDR SK    +P     T ++ A +F + V+   G PK I++D D IF S  W +        +K S  +  QTDGQ+E  
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISIN-TTFSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+ +E  LRC C  +P  W++ I   +  YN   H +   T F I++     P LS  E  + ++  ++   E  +V   +K+ L     +MKK+ D K 
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISIN-TTFSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REV-SFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELP--VEASIHDVFHVSQLKK
        +E+  F+ GD V +K    R ++       KL+P + GP+ + ++ G   Y L+LP  ++      FHVS L+K
Subjt:  REV-SFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELP--VEASIHDVFHVSQLKK

Q9UR07 Transposon Tf2-11 polyprotein1.4e-3332.12Show/hide
Query:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV
        MDFI  LP+++G+  + VVVDR SK    +P     T ++ A +F + V+   G PK I++D D IF S  W +        +K S  +  QTDGQ+E  
Subjt:  MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIV

Query:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISIN-TTFSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR
        N+ +E  LRC C  +P  W++ I   +  YN   H +   T F I++     P LS  E  + ++  ++   E  +V   +K+ L     +MKK+ D K 
Subjt:  NKCLETYLRCFCGENPKKWIEWIPWAEYWYNTTYHISIN-TTFSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKR

Query:  REV-SFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELP--VEASIHDVFHVSQLKK
        +E+  F+ GD V +K    R ++       KL+P + GP+ + ++ G   Y L+LP  ++      FHVS L+K
Subjt:  REV-SFEVGDWVFLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELP--VEASIHDVFHVSQLKK

Arabidopsis top hitse value%identityAlignment
AT5G08750.1 RING/FYVE/PHD zinc finger superfamily protein1.0e-2685.71Show/hide
Query:  KTAKSGLHILLGGVCALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHAAHTT
        +TAKSGLHILLGG+CALTVV+FFRF VLTRI+YGPARYWAILFVFWFLVFGIWASR+HA+H++
Subjt:  KTAKSGLHILLGGVCALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHAAHTT

AT5G08750.2 RING/FYVE/PHD zinc finger superfamily protein1.0e-2685.71Show/hide
Query:  KTAKSGLHILLGGVCALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHAAHTT
        +TAKSGLHILLGG+CALTVV+FFRF VLTRI+YGPARYWAILFVFWFLVFGIWASR+HA+H++
Subjt:  KTAKSGLHILLGGVCALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHAAHTT

AT5G08750.3 RING/FYVE/PHD zinc finger superfamily protein1.0e-2685.71Show/hide
Query:  KTAKSGLHILLGGVCALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHAAHTT
        +TAKSGLHILLGG+CALTVV+FFRF VLTRI+YGPARYWAILFVFWFLVFGIWASR+HA+H++
Subjt:  KTAKSGLHILLGGVCALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHAAHTT

AT5G63780.1 RING/FYVE/PHD zinc finger superfamily protein1.4e-2580.95Show/hide
Query:  KTAKSGLHILLGGVCALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHAAHTT
        KTA+SGLHILLGG+CALT+V+FFRF VLTRI+YGPARYWAILF+FWFLVFGIWASR++A+H +
Subjt:  KTAKSGLHILLGGVCALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHAAHTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCATCGAAAAACTTCCTAAGGCTACAGGATTTTACACGATTTTGGTGGTTGTGGACCGGTTAAGTAAGTACAACCATTTCTTACCTCTCAAACATCCT
TTCACTGACAAGGAAGTAGCTGCACTCTTTATCAAAGAGGTGGTTCGTCTCCATGGATTTCCAAAATCGATAGTCTCGGACAGGGACAAGATTTTCATCAGCCAT
TTTTGGAATGAATTGTTCAAACTTCAAGGGACTCAGCTGAAGAAGAGTACGACTTTCCACCTGCAGACCGATGGTCAATCTGAAATAGTGAACAAGTGTTTGGAA
ACGTATCTGCGTTGCTTTTGTGGGGAGAACCCGAAGAAGTGGATAGAGTGGATACCGTGGGCAGAGTATTGGTATAACACAACATATCACATATCCATTAATACT
ACATTCAGCATTTTGTATGGAAGACCTCCACCTCCTCTGCTATCTTATGGTGAGTCCAAAACGAGTAACAACACCTTGGAACAACAATTAATGGAAAGGGACAGA
GTGATTCTTGCCCTTAAGGATCAGCTGGAACTAGCCCGTAATCGCATGAAGAAATTTGCTGATAGAAAGCGGCGGGAAGTGAGTTTTGAAGTTGGAGACTGGGTG
TTTCTCAAAATCTGTCCTTATCGCCAACAGTCCTTAGCCAAGCGGCATTGTGAGAAGCTGTCGCCTAAATACTTCGGGCCTTACGAAATTAGTGAACGCGTTGGT
GAAGTAGCGTACTGTTTGGAACTGCCCGTGGAAGCTTCGATACATGATGTATTCCATGTCTCTCAACTGAAAAAGGTTTTAGGTGAAGTAGAGACAGTTCAACCT
GGAGTTCCTAATCTCAATGATAATTTCGAATGGTCCTTGACACTTGAATCTGTGTTAGGAATGCGTTGGAATTCTGAACTGATACAAGATGAGTGGCTAATTAAA
TGGGAAGGCTTGCAGGACTGTGATGCTTTGTGGGAGTATGTGAACACCATCAGAGACCAATTTCCTCAATTCCACCTTGGGGACAAGGTGCTTTTGACCCAGGGG
TATTGGATCGTGGGAGTGAGAGAAGTCAGTCTGTATTTTGGAATAGGACTCAGTCTTAGAGGAGAGGACCAGTTCTCTCGAATAGCTGGTACTGAGATTGGGTTC
CTAACACACTTACATGTTGAAATTTACACGGATGTTGATTGGAAAACTGCGAAAAGTGGCCTTCATATTCTTCTTGGAGGTGTTTGTGCTTTAACAGTAGTGGTT
TTCTTCCGTTTTTTTGTGCTTACCAGGATAAAATATGGACCTGCACGATACTGGGCTATTTTGTTTGTCTTTTGGTTCCTGGTGTTTGGCATTTGGGCATCGAGG
ACACACGCTGCTCATACGACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCATCGAAAAACTTCCTAAGGCTACAGGATTTTACACGATTTTGGTGGTTGTGGACCGGTTAAGTAAGTACAACCATTTCTTACCTCTCAAACATCCT
TTCACTGACAAGGAAGTAGCTGCACTCTTTATCAAAGAGGTGGTTCGTCTCCATGGATTTCCAAAATCGATAGTCTCGGACAGGGACAAGATTTTCATCAGCCAT
TTTTGGAATGAATTGTTCAAACTTCAAGGGACTCAGCTGAAGAAGAGTACGACTTTCCACCTGCAGACCGATGGTCAATCTGAAATAGTGAACAAGTGTTTGGAA
ACGTATCTGCGTTGCTTTTGTGGGGAGAACCCGAAGAAGTGGATAGAGTGGATACCGTGGGCAGAGTATTGGTATAACACAACATATCACATATCCATTAATACT
ACATTCAGCATTTTGTATGGAAGACCTCCACCTCCTCTGCTATCTTATGGTGAGTCCAAAACGAGTAACAACACCTTGGAACAACAATTAATGGAAAGGGACAGA
GTGATTCTTGCCCTTAAGGATCAGCTGGAACTAGCCCGTAATCGCATGAAGAAATTTGCTGATAGAAAGCGGCGGGAAGTGAGTTTTGAAGTTGGAGACTGGGTG
TTTCTCAAAATCTGTCCTTATCGCCAACAGTCCTTAGCCAAGCGGCATTGTGAGAAGCTGTCGCCTAAATACTTCGGGCCTTACGAAATTAGTGAACGCGTTGGT
GAAGTAGCGTACTGTTTGGAACTGCCCGTGGAAGCTTCGATACATGATGTATTCCATGTCTCTCAACTGAAAAAGGTTTTAGGTGAAGTAGAGACAGTTCAACCT
GGAGTTCCTAATCTCAATGATAATTTCGAATGGTCCTTGACACTTGAATCTGTGTTAGGAATGCGTTGGAATTCTGAACTGATACAAGATGAGTGGCTAATTAAA
TGGGAAGGCTTGCAGGACTGTGATGCTTTGTGGGAGTATGTGAACACCATCAGAGACCAATTTCCTCAATTCCACCTTGGGGACAAGGTGCTTTTGACCCAGGGG
TATTGGATCGTGGGAGTGAGAGAAGTCAGTCTGTATTTTGGAATAGGACTCAGTCTTAGAGGAGAGGACCAGTTCTCTCGAATAGCTGGTACTGAGATTGGGTTC
CTAACACACTTACATGTTGAAATTTACACGGATGTTGATTGGAAAACTGCGAAAAGTGGCCTTCATATTCTTCTTGGAGGTGTTTGTGCTTTAACAGTAGTGGTT
TTCTTCCGTTTTTTTGTGCTTACCAGGATAAAATATGGACCTGCACGATACTGGGCTATTTTGTTTGTCTTTTGGTTCCTGGTGTTTGGCATTTGGGCATCGAGG
ACACACGCTGCTCATACGACGTAA
Protein sequenceShow/hide protein sequence
MDFIEKLPKATGFYTILVVVDRLSKYNHFLPLKHPFTDKEVAALFIKEVVRLHGFPKSIVSDRDKIFISHFWNELFKLQGTQLKKSTTFHLQTDGQSEIVNKCLE
TYLRCFCGENPKKWIEWIPWAEYWYNTTYHISINTTFSILYGRPPPPLLSYGESKTSNNTLEQQLMERDRVILALKDQLELARNRMKKFADRKRREVSFEVGDWV
FLKICPYRQQSLAKRHCEKLSPKYFGPYEISERVGEVAYCLELPVEASIHDVFHVSQLKKVLGEVETVQPGVPNLNDNFEWSLTLESVLGMRWNSELIQDEWLIK
WEGLQDCDALWEYVNTIRDQFPQFHLGDKVLLTQGYWIVGVREVSLYFGIGLSLRGEDQFSRIAGTEIGFLTHLHVEIYTDVDWKTAKSGLHILLGGVCALTVVV
FFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHAAHTT