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Lag0011259 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011259
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr1:19203286..19204665
RNA-Seq ExpressionLag0011259
SyntenyLag0011259
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038261.1 putative inactive receptor-like protein kinase [Cucumis melo var. makuwa]3.8e-0742.86Show/hide
Query:  METSETNSEISSDSQN-----GQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTIRKE
        M  +  +S +S DS        QI + G+KIS +KL D+NFL+WKFQILT LE +DL+ ++   ++PP K I    N T+I  E
Subjt:  METSETNSEISSDSQN-----GQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTIRKE

KAA0068024.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.2e-0732.95Show/hide
Query:  METSETNSEISSDSQNGQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTI-----RKEGDVQGHIMYILSGLGA
        +E +E +S I+      QI   GNKIS +KL D+NFL+WKFQILTALE +D+++ +  +S+PP K +  + + +T        E     +   ++S    
Subjt:  METSETNSEISSDSQNGQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTI-----RKEGDVQGHIMYILSGLGA

Query:  KYETMVSVTLAKTAVQ--NASQNSVQNPSPQPQQQKFSNGKGRGRSNFGQNRGGRS-----LCTQFSSHGQMN
            +V+ T  K A      SQN+  N     Q+     G+G GRSN G  RG R+     +CT+       N
Subjt:  KYETMVSVTLAKTAVQ--NASQNSVQNPSPQPQQQKFSNGKGRGRSNFGQNRGGRS-----LCTQFSSHGQMN

XP_022148749.1 uncharacterized protein LOC111017341 isoform X1 [Momordica charantia]1.4e-1459.72Show/hide
Query:  SETNSEISSDSQNG----QIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSE
        S  N+EI S   NG    Q +NPGNKIST+KLTDENFL+WKFQ+LT LEGH L+ +I  D  PPPK IQ+++
Subjt:  SETNSEISSDSQNG----QIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSE

XP_022148750.1 uncharacterized protein LOC111017341 isoform X2 [Momordica charantia]9.3e-1462.32Show/hide
Query:  SETNSEISSDSQNG----QIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQ
        S  N+EI S   NG    Q +NPGNKIST+KLTDENFL+WKFQ+LT LEGH L+ +I  D  PPPK IQ
Subjt:  SETNSEISSDSQNG----QIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQ

XP_022159146.1 uncharacterized protein LOC111025572 [Momordica charantia]6.9e-0946.05Show/hide
Query:  METSETNSEISSDSQNGQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTI
        + +SET+S +   +QN  IVNPGNKIST+KL DENFL+W+ QI TAL+GH L   I  +++ P + +Q ++  +++
Subjt:  METSETNSEISSDSQNGQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTI

TrEMBL top hitse value%identityAlignment
A0A5A7T9J7 Putative inactive receptor-like protein kinase1.8e-0742.86Show/hide
Query:  METSETNSEISSDSQN-----GQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTIRKE
        M  +  +S +S DS        QI + G+KIS +KL D+NFL+WKFQILT LE +DL+ ++   ++PP K I    N T+I  E
Subjt:  METSETNSEISSDSQN-----GQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTIRKE

A0A5D3D3G2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-0732.95Show/hide
Query:  METSETNSEISSDSQNGQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTI-----RKEGDVQGHIMYILSGLGA
        +E +E +S I+      QI   GNKIS +KL D+NFL+WKFQILTALE +D+++ +  +S+PP K +  + + +T        E     +   ++S    
Subjt:  METSETNSEISSDSQNGQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTI-----RKEGDVQGHIMYILSGLGA

Query:  KYETMVSVTLAKTAVQ--NASQNSVQNPSPQPQQQKFSNGKGRGRSNFGQNRGGRS-----LCTQFSSHGQMN
            +V+ T  K A      SQN+  N     Q+     G+G GRSN G  RG R+     +CT+       N
Subjt:  KYETMVSVTLAKTAVQ--NASQNSVQNPSPQPQQQKFSNGKGRGRSNFGQNRGGRS-----LCTQFSSHGQMN

A0A6J1D3S9 uncharacterized protein LOC111017341 isoform X24.5e-1462.32Show/hide
Query:  SETNSEISSDSQNG----QIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQ
        S  N+EI S   NG    Q +NPGNKIST+KLTDENFL+WKFQ+LT LEGH L+ +I  D  PPPK IQ
Subjt:  SETNSEISSDSQNG----QIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQ

A0A6J1D4X2 uncharacterized protein LOC111017341 isoform X17.0e-1559.72Show/hide
Query:  SETNSEISSDSQNG----QIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSE
        S  N+EI S   NG    Q +NPGNKIST+KLTDENFL+WKFQ+LT LEGH L+ +I  D  PPPK IQ+++
Subjt:  SETNSEISSDSQNG----QIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSE

A0A6J1E314 uncharacterized protein LOC1110255723.4e-0946.05Show/hide
Query:  METSETNSEISSDSQNGQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTI
        + +SET+S +   +QN  IVNPGNKIST+KL DENFL+W+ QI TAL+GH L   I  +++ P + +Q ++  +++
Subjt:  METSETNSEISSDSQNGQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCTCTGAAACCAATTCCGAGATCTCAAGCGACTCGCAAAATGGCCAAATCGTTAACCCTGGGAATAAGATCTCCACTATGAAGCTGACCGATGAAAACTTCCT
GATGTGGAAGTTCCAGATCCTCACTGCTCTCGAAGGTCACGATCTCGATGACCATATCAGTGTTGACTCTCAACCACCGCCTAAGACGATCCAGGTAAGTGAAAATGGAA
CAACGATCAGAAAAGAAGGCGATGTACAGGGTCATATTATGTATATTTTGTCTGGATTGGGGGCTAAATATGAGACTATGGTATCTGTTACCCTTGCTAAAACTGCTGTT
CAAAATGCTAGTCAAAACTCAGTCCAAAACCCTTCCCCTCAACCTCAACAGCAAAAGTTTAGTAATGGTAAAGGTAGGGGCCGTTCTAATTTTGGTCAAAACAGAGGTGG
AAGGAGTTTATGCACTCAATTTAGTTCCCATGGACAAATGAACTCTTCTGGTCTAAATTTTGGTCCTCAACAGTTCAGTGGTCAGTTTTCCCGGATGCAAGCAATGCTAG
CCTCTCCTAATTACAACCAGGATTGTAATTGGTATCTTGATTTCGGAGGATCTAGAACCTGGACGGGCACTCCTTCGAGGGACTCTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCTCTGAAACCAATTCCGAGATCTCAAGCGACTCGCAAAATGGCCAAATCGTTAACCCTGGGAATAAGATCTCCACTATGAAGCTGACCGATGAAAACTTCCT
GATGTGGAAGTTCCAGATCCTCACTGCTCTCGAAGGTCACGATCTCGATGACCATATCAGTGTTGACTCTCAACCACCGCCTAAGACGATCCAGGTAAGTGAAAATGGAA
CAACGATCAGAAAAGAAGGCGATGTACAGGGTCATATTATGTATATTTTGTCTGGATTGGGGGCTAAATATGAGACTATGGTATCTGTTACCCTTGCTAAAACTGCTGTT
CAAAATGCTAGTCAAAACTCAGTCCAAAACCCTTCCCCTCAACCTCAACAGCAAAAGTTTAGTAATGGTAAAGGTAGGGGCCGTTCTAATTTTGGTCAAAACAGAGGTGG
AAGGAGTTTATGCACTCAATTTAGTTCCCATGGACAAATGAACTCTTCTGGTCTAAATTTTGGTCCTCAACAGTTCAGTGGTCAGTTTTCCCGGATGCAAGCAATGCTAG
CCTCTCCTAATTACAACCAGGATTGTAATTGGTATCTTGATTTCGGAGGATCTAGAACCTGGACGGGCACTCCTTCGAGGGACTCTACATGA
Protein sequenceShow/hide protein sequence
METSETNSEISSDSQNGQIVNPGNKISTMKLTDENFLMWKFQILTALEGHDLDDHISVDSQPPPKTIQVSENGTTIRKEGDVQGHIMYILSGLGAKYETMVSVTLAKTAV
QNASQNSVQNPSPQPQQQKFSNGKGRGRSNFGQNRGGRSLCTQFSSHGQMNSSGLNFGPQQFSGQFSRMQAMLASPNYNQDCNWYLDFGGSRTWTGTPSRDST