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Lag0011280 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011280
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposable element protein
Genome locationchr1:19923215..19926108
RNA-Seq ExpressionLag0011280
SyntenyLag0011280
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023521407.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo]2.3e-2376.39Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEK
        MSPY+LV+GKACHLPLELEHK FWALKKLNFD +  G +R +QLNELEEFR  +YENAKMYKEKTK+WH+ K
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEK

XP_023522102.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp. pepo]2.3e-2376.39Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEK
        MSPY+LV+GKACHLPLELEHK FWALKKLNFD +  G +R +QLNELEEFR  +YENAKMYKEKTK+WH+ K
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEK

XP_027186086.1 LOW QUALITY PROTEIN: uncharacterized protein LOC113784129 [Cicer arietinum]6.7e-2375Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEK
        MSPY++VYGKACHLPLELEH+ FWA K LNFD  +AG  R+LQLNELEEFR F+YENAK+YKEKTK WH++K
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEK

XP_030478524.1 uncharacterized protein LOC115695608 [Cannabis sativa]8.7e-2371.25Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEKSENEKEED
        MSPYRLVYGKACHLP+ELEHK FWA+KKLNFD   AG  R+LQLNELEE R FSYENAK+YKEKTK WH+++ ++   E+
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEKSENEKEED

XP_030498087.1 uncharacterized protein LOC115713746 [Cannabis sativa]8.7e-2371.25Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEKSENEKEED
        MSPYRLVYGKACHLP+ELEHK FWA+KKLNFD   AG  R+LQLNELEE R FSYENAK+YKEKTK WH+++ ++   E+
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEKSENEKEED

TrEMBL top hitse value%identityAlignment
A0A3Q7XQS1 LOW QUALITY PROTEIN: uncharacterized protein LOC1137841293.2e-2375Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEK
        MSPY++VYGKACHLPLELEH+ FWA K LNFD  +AG  R+LQLNELEEFR F+YENAK+YKEKTK WH++K
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEK

A0A4Y1QLX2 Transposable element protein3.0e-2173.24Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEE
        MSPYRLV+GKACHLP+ELEHK FWA+K LNFD S AG  R LQLNELEE R  SYENAK+YK++TK WH++
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEE

A0A4Y1RS99 Transposable element protein3.0e-2173.24Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEE
        MSPYRLV+GKACHLP+ELEHK FWA+K LNFD S AG  R LQLNELEE R  SYENAK+YK++TK WH++
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEE

A0A4Y1RSJ3 Transposable element protein3.0e-2173.24Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEE
        MSPYRLV+GKACHLP+ELEHK FWA+K LNFD S AG  R LQLNELEE R  SYENAK+YK++TK WH++
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEE

A0A6P4BIF0 uncharacterized protein K02A2.6-like6.1e-2273.61Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEK
        MSPYRLV+GKACHLP+ELEH+ FWALK LNFD   AG  R+LQLNELEEFR  +YENAK+YKE TK WH++K
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCCTATAGGTTAGTATATGGGAAAGCTTGCCATCTACCATTGGAGCTAGAGCATAAAACGTTTTGGGCTTTGAAAAAGTTAAATTTTGATCGAAGTCGTGCAGG
AGCAATCAGAATGCTACAGCTTAATGAATTGGAGGAATTTCGCCAGTTTTCTTATGAAAATGCGAAAATGTATAAGGAAAAGACTAAGTTGTGGCATGAAGAAAAAAGCG
AAAATGAAAAAGAAGAGGACGTCGGAGGAAAAAGAAGCGAAGAGAAGGAGAAGCAGCAAAGGATTGTGGAAAAAGAAGAGTTCCAGGAGGCAGCAGATGAGGTTGTTGCC
ACAGTAGTTGAAGAAGACCCGAAAGAACCAGAAGAACATAACGAAGAACAGGCTGAGCAGAGAGTTGCAGGTACAGAGGAAGTTCGAGAGGAGATTCAAGAAAAACAGAA
TGAGGATGTGCAGACAGAGGTTGCGACTGAGAATGAGCCAGTTCAAGAGGCTCGAGTGGAGGTGATCATGCCAGAGGTACCTAAGCGTCGCCGCATTAAGCAAAAGCGCC
AGAGAGAGGAACAAGAGAAGAAGGAAGCTGAAGAGAAGACGAGAGAAGAAGAAGCAAAAAGGGCTGAGGAAGAGATTCTGCCCAAGCGAAGAGAAGACAAGGGCAAAGGA
ATTGCTGAGGCATCGGGTGAGACTGGCGAGATTGAGGAACCAAGGTTGCCTTTTATTCGCTTCGTCAACGACCTTGCTCGAGCAAAATACCAGGAGGTGCTGAAACGTGA
CTTCTTGTTCGAACGAGGATTTGGCAGTGATTTGCCCAGGTTCTTAGAGTCTGGAATAGGAACCTTGGGTGGAGGCATTCGAGGAGTGCCTGTACAGTGGAGCCCAGAAG
CCATTAATAATTTGTTTAATCTCCAGGATTTTCCGCATGCAGTTTTTAATGAAATGATGGTTGCACCATCGAGCGACCAATTAAGTGCGGCTGTCCGAGAGGTAGGCATT
GAGGGGGCTCAATGGAGGGTGTCGCAGACGCGGAAGCACACGTTTCAAGCTGCTTATTTGAAGAGTGAAGCCAACACTTGGATGGGTTTCATTAGGCTACGCTTACTGCC
GACAACACACGACTCCACAGTATCTCAGGACAGGGTATTGCTTGCCTTTGCCATTCTTCGCTCGATGAGTATTGATGTAGGAAAAATAATTTCTTTGAGATTGTTGACTG
CTGGAAAAAGAAGGGAATCATTGATACGCCCAATTTGGCGCACTCCAGCGTACGCAGGAGATACGACAAGGAGGGCTAATCTACGCATGAATACGATTCTAGAACAACTG
GCACTGTTGGCCAGCAGGCAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGACCTATGTTAAGAATCGTGATGCTGGTTTGAAGAGGGCGCTGCAAGAAAATTTGTC
AAAGCCATATCCAGCCCTCCCTGCATTCCCGAAGACTTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCCTATAGGTTAGTATATGGGAAAGCTTGCCATCTACCATTGGAGCTAGAGCATAAAACGTTTTGGGCTTTGAAAAAGTTAAATTTTGATCGAAGTCGTGCAGG
AGCAATCAGAATGCTACAGCTTAATGAATTGGAGGAATTTCGCCAGTTTTCTTATGAAAATGCGAAAATGTATAAGGAAAAGACTAAGTTGTGGCATGAAGAAAAAAGCG
AAAATGAAAAAGAAGAGGACGTCGGAGGAAAAAGAAGCGAAGAGAAGGAGAAGCAGCAAAGGATTGTGGAAAAAGAAGAGTTCCAGGAGGCAGCAGATGAGGTTGTTGCC
ACAGTAGTTGAAGAAGACCCGAAAGAACCAGAAGAACATAACGAAGAACAGGCTGAGCAGAGAGTTGCAGGTACAGAGGAAGTTCGAGAGGAGATTCAAGAAAAACAGAA
TGAGGATGTGCAGACAGAGGTTGCGACTGAGAATGAGCCAGTTCAAGAGGCTCGAGTGGAGGTGATCATGCCAGAGGTACCTAAGCGTCGCCGCATTAAGCAAAAGCGCC
AGAGAGAGGAACAAGAGAAGAAGGAAGCTGAAGAGAAGACGAGAGAAGAAGAAGCAAAAAGGGCTGAGGAAGAGATTCTGCCCAAGCGAAGAGAAGACAAGGGCAAAGGA
ATTGCTGAGGCATCGGGTGAGACTGGCGAGATTGAGGAACCAAGGTTGCCTTTTATTCGCTTCGTCAACGACCTTGCTCGAGCAAAATACCAGGAGGTGCTGAAACGTGA
CTTCTTGTTCGAACGAGGATTTGGCAGTGATTTGCCCAGGTTCTTAGAGTCTGGAATAGGAACCTTGGGTGGAGGCATTCGAGGAGTGCCTGTACAGTGGAGCCCAGAAG
CCATTAATAATTTGTTTAATCTCCAGGATTTTCCGCATGCAGTTTTTAATGAAATGATGGTTGCACCATCGAGCGACCAATTAAGTGCGGCTGTCCGAGAGGTAGGCATT
GAGGGGGCTCAATGGAGGGTGTCGCAGACGCGGAAGCACACGTTTCAAGCTGCTTATTTGAAGAGTGAAGCCAACACTTGGATGGGTTTCATTAGGCTACGCTTACTGCC
GACAACACACGACTCCACAGTATCTCAGGACAGGGTATTGCTTGCCTTTGCCATTCTTCGCTCGATGAGTATTGATGTAGGAAAAATAATTTCTTTGAGATTGTTGACTG
CTGGAAAAAGAAGGGAATCATTGATACGCCCAATTTGGCGCACTCCAGCGTACGCAGGAGATACGACAAGGAGGGCTAATCTACGCATGAATACGATTCTAGAACAACTG
GCACTGTTGGCCAGCAGGCAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGACCTATGTTAAGAATCGTGATGCTGGTTTGAAGAGGGCGCTGCAAGAAAATTTGTC
AAAGCCATATCCAGCCCTCCCTGCATTCCCGAAGACTTACTAA
Protein sequenceShow/hide protein sequence
MSPYRLVYGKACHLPLELEHKTFWALKKLNFDRSRAGAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHEEKSENEKEEDVGGKRSEEKEKQQRIVEKEEFQEAADEVVA
TVVEEDPKEPEEHNEEQAEQRVAGTEEVREEIQEKQNEDVQTEVATENEPVQEARVEVIMPEVPKRRRIKQKRQREEQEKKEAEEKTREEEAKRAEEEILPKRREDKGKG
IAEASGETGEIEEPRLPFIRFVNDLARAKYQEVLKRDFLFERGFGSDLPRFLESGIGTLGGGIRGVPVQWSPEAINNLFNLQDFPHAVFNEMMVAPSSDQLSAAVREVGI
EGAQWRVSQTRKHTFQAAYLKSEANTWMGFIRLRLLPTTHDSTVSQDRVLLAFAILRSMSIDVGKIISLRLLTAGKRRESLIRPIWRTPAYAGDTTRRANLRMNTILEQL
ALLASRQEFAERQTLTFWTYVKNRDAGLKRALQENLSKPYPALPAFPKTY