; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011293 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011293
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr1:20351124..20357125
RNA-Seq ExpressionLag0011293
SyntenyLag0011293
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]2.9e-14360.18Show/hide
Query:  SKTLQDINISGRLKTPSRPEDFKLQESIEASDSRSSVPVLETRNNLAGAYTNDK-FLIKYNPLFE------PDSDVVTVMMTETRTMEERMAEIQEHINT
        SK L D  I  R  T SR  + +  E +   D   ++    ++    G    +   + ++N L E      P  ++++VM+T+  T E+RMAE+++ +N 
Subjt:  SKTLQDINISGRLKTPSRPEDFKLQESIEASDSRSSVPVLETRNNLAGAYTNDK-FLIKYNPLFE------PDSDVVTVMMTETRTMEERMAEIQEHINT

Query:  LMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIG
        LMKA+EE+D +IA LK+ IE++   ESS T  IKN +KGK I+Q+ QPQ STS+ASLS+QQLQ+MI N I+ QYGGP Q   LY KPYTKRIDN+R P G
Subjt:  LMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIG

Query:  YQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNY
        YQPPKFQQFDGKGNPKQ++AHF+ETCE AGTRGDLLVKQFVRTLKGN FDWYTDLEPESI+SWE+LER+FLN FYSTRR VSM +LT TKQ+KGE V++Y
Subjt:  YQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNY

Query:  INRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLPNMRKEEKNDEET-------IEESMVVNTTLP
        INRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R N DLL+P +RKE+K  + T        +E+MVV+TT  
Subjt:  INRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLPNMRKEEKNDEET-------IEESMVVNTTLP

Query:  KSFSKE-----NQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCK
        K  SKE      Q        TLKERQ+K+YPFPD+D+PDML+QLLE QLI+LP+CK
Subjt:  KSFSKE-----NQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCK

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]4.2e-14265.85Show/hide
Query:  LIKYNPLF------------EPDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQP-Q
        +IK NPL+            E   DV++VMM +   +E  MAE++  IN LMK ++E+D +IA LK Q++ +   ESSQT V+K  DKGK +VQ++QP Q
Subjt:  LIKYNPLF------------EPDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQP-Q

Query:  CSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVF
         STSVASLS+QQLQDMITN IRAQYGGP+Q S +Y KPYTKRIDNLR P+GYQPPKFQQFDGKGNPKQ++AHFVETCENAG+RGD LV+QFVR+LKGN F
Subjt:  CSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVF

Query:  DWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELAT
        +WYTDLEPESI SWE+LE+EFLN FYSTRRTVSM +LTNTKQ+KGE V++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT
Subjt:  DWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELAT

Query:  HAHDMELSIASRENQDLLLPNMRKE-------EKNDEETIEESMVVNTTLPKSFSK-------ENQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLE
         AHDMELSIASR  +D L+P ++K+       EK  + T +ESMVVNTT P  FSK       +    +    LTLKERQ+K+YPFPD+DI DMLEQLLE
Subjt:  HAHDMELSIASRENQDLLLPNMRKE-------EKNDEETIEESMVVNTTLPKSFSK-------ENQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLE

Query:  AQLIELPKCK
         QLI+LP+CK
Subjt:  AQLIELPKCK

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.2e-14165.61Show/hide
Query:  LIKYNPLF------------EPDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQP-Q
        +IK NPL+            E   DV++VMM +   +E  MAE++  IN LMK ++E+D +IA LK Q++ +   ESSQT V+K  DKGK +VQ++QP Q
Subjt:  LIKYNPLF------------EPDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQP-Q

Query:  CSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVF
         STSVASLS+QQLQDMIT+ IRAQYGGP+Q S +Y KPYTKRIDNLR P+GYQPPKFQQFDGKGNPKQ++AHFVETCENAG+RGD LV+QFVR+LKGN F
Subjt:  CSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVF

Query:  DWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELAT
        +WYTDLEPESI SWE+LE+EFLN FYSTRRTVSM +LTNTKQ+KGE V++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT
Subjt:  DWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELAT

Query:  HAHDMELSIASRENQDLLLPNMRKE-------EKNDEETIEESMVVNTTLPKSFSK-------ENQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLE
         AHDMELSIASR  +D L+P ++K+       EK  + T +ESMVVNTT P  FSK       +    +    LTLKERQ+K+YPFPD+DI DMLEQLLE
Subjt:  HAHDMELSIASRENQDLLLPNMRKE-------EKNDEETIEESMVVNTTLPKSFSK-------ENQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLE

Query:  AQLIELPKCK
         QLI+LP+CK
Subjt:  AQLIELPKCK

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]5.4e-14265.61Show/hide
Query:  LIKYNPLF------------EPDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQP-Q
        +IK NPL+            E   DV++VMM +   +E  MAE++  IN LMK ++E+D +IA LK Q++ +   ESSQT V+K  DKGK +VQ++QP Q
Subjt:  LIKYNPLF------------EPDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQP-Q

Query:  CSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVF
         STSVASLS+QQLQDMIT+ IRAQYGGP+Q S +Y KPYTKRIDNLR P+GYQPPKFQQFDGKGNPKQ++AHFVETCENAG+RGD LV+QFVR+LKGN F
Subjt:  CSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVF

Query:  DWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELAT
        +WYTDLEPESI SWE+LE+EFLN FYSTRRTVSM +LTNTKQ+KGE V++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT
Subjt:  DWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELAT

Query:  HAHDMELSIASRENQDLLLPNMRKE-------EKNDEETIEESMVVNTTLPKSFSK-------ENQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLE
         AHDMELSIASR  +D L+P ++K+       EK  + T++ESMVVNTT P  FSK       +    +    LTLKERQ+K+YPFPD+DI DMLEQLLE
Subjt:  HAHDMELSIASRENQDLLLPNMRKE-------EKNDEETIEESMVVNTTLPKSFSK-------ENQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLE

Query:  AQLIELPKCK
         QLI+LP+CK
Subjt:  AQLIELPKCK

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]4.2e-14265.85Show/hide
Query:  LIKYNPLF------------EPDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQP-Q
        +IK NPL+            E   DV++VMM +   +E  MAE++  IN LMK ++E+D +IA LK Q++ +   ESSQT V+K  DKGK +VQ++QP Q
Subjt:  LIKYNPLF------------EPDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQP-Q

Query:  CSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVF
         STSVASLS+QQLQDMITN IRAQYGGP+Q S +Y KPYTKRIDNLR P+GYQPPKFQQFDGKGNPKQ++AHFVETCENAG+RGD LV+QFVR+LKGN F
Subjt:  CSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVF

Query:  DWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELAT
        +WYTDLEPESI SWE+LE+EFLN FYSTRRTVSM +LTNTKQ+KGE V++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT
Subjt:  DWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELAT

Query:  HAHDMELSIASRENQDLLLPNMRKE-------EKNDEETIEESMVVNTTLPKSFSK-------ENQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLE
         AHDMELSIASR  +D L+P ++K+       EK  + T +ESMVVNTT P  FSK       +    +    LTLKERQ+K+YPFPD+DI DMLEQLLE
Subjt:  HAHDMELSIASRENQDLLLPNMRKE-------EKNDEETIEESMVVNTTLPKSFSK-------ENQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLE

Query:  AQLIELPKCK
         QLI+LP+CK
Subjt:  AQLIELPKCK

TrEMBL top hitse value%identityAlignment
A0A5A7TST6 Ty3-gypsy retrotransposon protein2.5e-14065.46Show/hide
Query:  PDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLSIQQLQDMITNCIR
        P S++++VM+T   T E RMAE+++ +N LMK +EE+D +IA LK+ IE++   ESS    +KN DKGK ++Q+ QPQ STS+ASLS+QQLQ+MI + I+
Subjt:  PDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLSIQQLQDMITNCIR

Query:  AQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPESINSWEELEREFL
         QYGGP Q   LY KPYTKRIDNLR   GYQPPKFQQFDGKGNPKQ++AHF+ETCE AGTRGDLLVKQFVRTLKGN FDWY DLEPESI++WE+LER+FL
Subjt:  AQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPESINSWEELEREFL

Query:  NCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLPNM
        N FYSTRR VSM +LTNT+QQKGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSI +RE +D L+P  
Subjt:  NCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLPNM

Query:  RKEEKNDEET-------IEESMVVNTTLPKSFSKENQ-------QTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCK
        R ++   ++T       I+ESMVV+ T  KSFSK  +         N     TLKERQ+K+YPFPD+D+ DMLEQLLE QLI+LP+CK
Subjt:  RKEEKNDEET-------IEESMVVNTTLPKSFSKENQ-------QTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCK

A0A5A7TZU9 Ribonuclease H1.4e-14360.18Show/hide
Query:  SKTLQDINISGRLKTPSRPEDFKLQESIEASDSRSSVPVLETRNNLAGAYTNDK-FLIKYNPLFE------PDSDVVTVMMTETRTMEERMAEIQEHINT
        SK L D  I  R  T SR  + +  E +   D   ++    ++    G    +   + ++N L E      P  ++++VM+T+  T E+RMAE+++ +N 
Subjt:  SKTLQDINISGRLKTPSRPEDFKLQESIEASDSRSSVPVLETRNNLAGAYTNDK-FLIKYNPLFE------PDSDVVTVMMTETRTMEERMAEIQEHINT

Query:  LMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIG
        LMKA+EE+D +IA LK+ IE++   ESS T  IKN +KGK I+Q+ QPQ STS+ASLS+QQLQ+MI N I+ QYGGP Q   LY KPYTKRIDN+R P G
Subjt:  LMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIG

Query:  YQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNY
        YQPPKFQQFDGKGNPKQ++AHF+ETCE AGTRGDLLVKQFVRTLKGN FDWYTDLEPESI+SWE+LER+FLN FYSTRR VSM +LT TKQ+KGE V++Y
Subjt:  YQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNY

Query:  INRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLPNMRKEEKNDEET-------IEESMVVNTTLP
        INRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R N DLL+P +RKE+K  + T        +E+MVV+TT  
Subjt:  INRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLPNMRKEEKNDEET-------IEESMVVNTTLP

Query:  KSFSKE-----NQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCK
        K  SKE      Q        TLKERQ+K+YPFPD+D+PDML+QLLE QLI+LP+CK
Subjt:  KSFSKE-----NQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCK

A0A5A7UUI7 Ty3-gypsy retrotransposon protein5.5e-14058.39Show/hide
Query:  SKTLQDINISGRLKTPSRPEDFKLQESIEASDSRSSVPVLETRNNLAGAYTNDKFLI-KYNPLFE------PDSDVVTVMMTETRTMEERMAEIQEHINT
        SK L D  I  R  T SR  + +  E +   +   ++    ++    G    +   + ++N L E      P  ++++VM+T   T E RMAE+++ +N 
Subjt:  SKTLQDINISGRLKTPSRPEDFKLQESIEASDSRSSVPVLETRNNLAGAYTNDKFLI-KYNPLFE------PDSDVVTVMMTETRTMEERMAEIQEHINT

Query:  LMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIG
        LMK +EE+D +IA LK+ IE++   ESS    +KN DKGK ++Q+ QPQ STS+ASLS+QQLQ+MI + I+ QYGGP Q   LY KPYTKRIDNLR P G
Subjt:  LMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIG

Query:  YQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNY
        YQPPKFQQFDGKGNPKQ++AHF+ETCE AGTRGDLLVKQFVRTLKGN FDWY DLEPESI++WE+LER+FLN FYSTRR VSM +LTNT+QQKGELV++Y
Subjt:  YQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPESINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNY

Query:  INRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLPNMRKEEKNDEET-------IEESMVVNTTLP
        INRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R  +D L+P  R ++   ++T       I+ESMVV+ T  
Subjt:  INRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLPNMRKEEKNDEET-------IEESMVVNTTLP

Query:  KSFSKENQQTNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCK
        KSFSK  +      H        TLKERQ+K++PFPD+DI DMLEQLLE QLI+LP+CK
Subjt:  KSFSKENQQTNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCK

A0A5A7UXF0 Ty3-gypsy retrotransposon protein1.9e-14065.97Show/hide
Query:  DVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLSIQQLQDMITNCIRAQY
        ++++VM+T   T E RMAE+++ +N LMK +EE+D +IA LK+ IE++   ESS   ++KN DKGK ++Q+ QPQ STS+ASLS+QQLQ+MI + I+ QY
Subjt:  DVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLSIQQLQDMITNCIRAQY

Query:  GGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPESINSWEELEREFLNCF
        GGP Q   LY KPYTKRIDNLR P GYQPPKFQQFDGKGNPKQ++AHF+ETCE AGTRGDLLVKQFVRTLKGN FDWY DLEPESI++WE+LER+FLN F
Subjt:  GGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPESINSWEELEREFLNCF

Query:  YSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLPNMRKE
        YSTRR VSM +LTNT+QQKGELV+NYINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R  +D L+P  R +
Subjt:  YSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLPNMRKE

Query:  EKNDEET-------IEESMVVNTTLPKSFSKENQQTNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCK
        +   ++T       I+ESMVV+ T  KSFSK  +      H        TLKERQ+K+YPFPD+D+ DMLEQLLE QLI+LP+CK
Subjt:  EKNDEET-------IEESMVVNTTLPKSFSKENQQTNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCK

A0A5D3D4X3 Ty3-gypsy retrotransposon protein1.9e-14064.09Show/hide
Query:  KYNPLFE------PDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLS
        K+N L E      P  ++++VM+T+    E+RMAE+++ +N LMK +EE+D +IA LK+ IE++   ESS    +KN DKGK ++Q+ QPQ STS+ASLS
Subjt:  KYNPLFE------PDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLS

Query:  IQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPE
        +QQLQ+MI + I+ QYGGP Q   LY KPYTKRIDNLR P GYQPPKFQQFDGKGNPKQ++AHF+ETCE AGTRGDLLVKQFVRTLKGN FDWY DLEPE
Subjt:  IQQLQDMITNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPE

Query:  SINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSI
        SI++WE+LER+FLN FYSTRR VSM +LTNT+QQKGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSI
Subjt:  SINSWEELEREFLNCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSI

Query:  ASRENQDLLLPNMRKEEKNDEET-------IEESMVVNTTLPKSFSKENQQTNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKC
        A+R  +D L+P  R ++   ++T       I+ESMVV+ T  KSFSK  +      H        TLKERQ+K+YPFPD+D+ DMLEQLLE QLI+LP+C
Subjt:  ASRENQDLLLPNMRKEEKNDEET-------IEESMVVNTTLPKSFSKENQQTNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKC

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACGGGGCGAGGCGAGGACGGGGATGGCTTCCCCGTCCCCATCCCTGCCTCCCATTTCAATCCTCATCCCCATGGGAAATTTGCGGGGATCGGGGGAAGG
TCCCCACGGGGCCCCGGCCCGCAGGGCAAATGGACATCCCTATTGAGATCAAAGACTCTTCAGGACATCAACATTTCTGGAAGACTGAAGACTCCTTCAAGACCG
GAAGACTTCAAGCTCCAAGAATCCATTGAAGCTTCAGACTCGAGATCAAGCGTTCCAGTCCTCGAGACAAGAAACAACCTTGCAGGGGCATATACTAATGACAAG
TTTCTTATTAAGTATAATCCTTTGTTTGAACCTGATTCTGACGTAGTGACTGTCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGGCTGAGATTCAGGAA
CACATCAACACCTTGATGAAGGCAATTGAAGAAAAAGATTCTCAAATCGCGCAACTAAAGAGCCAAATTGAGAACCAACATATCGTCGAATCAAGTCAAACCCAA
GTCATAAAAAATCATGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGTGTTCTACTTCGGTCGCTTCACTATCCATCCAACAGCTCCAAGATATGATC
ACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTTCAAACCTTATACTAAGAGGATTGATAACTTGAGAACACCAATCGGGTAT
CAACCACCGAAATTTCAGCAGTTTGATGGAAAGGGCAATCCTAAACAATATATTGCTCACTTCGTTGAGACATGCGAGAATGCTGGTACTCGAGGGGACCTACTA
GTCAAACAGTTCGTTCGAACACTTAAAGGAAATGTTTTTGACTGGTACACTGATCTAGAACCTGAGTCAATAAACAGTTGGGAAGAACTCGAAAGAGAGTTTTTG
AATTGCTTCTACAGCACTAGACGAACCGTTAGCATGTTCAAGCTCACCAATACTAAACAACAAAAAGGTGAACTCGTTGTTAACTATATAAATCGCTGGAGAGCT
ATGAGTTTAGATTGCAAAGATCGCCTCACTGAACTCTCTTCCGTTGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCT
CGCACCTTTGAGGAACTAGCAACTCACGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTCCTGCCTAACATGAGAAAAGAAGAAAAG
AACGACGAAGAGACTATAGAAGAATCTATGGTTGTCAACACAACCCTTCCCAAGTCATTTTCGAAAGAAAACCAACAAACAAATGGAGCGCATCACCTAACTTTA
AAGGAAAGACAGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGTTGGAACAACTACTGGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACGGGGCGAGGCGAGGACGGGGATGGCTTCCCCGTCCCCATCCCTGCCTCCCATTTCAATCCTCATCCCCATGGGAAATTTGCGGGGATCGGGGGAAGG
TCCCCACGGGGCCCCGGCCCGCAGGGCAAATGGACATCCCTATTGAGATCAAAGACTCTTCAGGACATCAACATTTCTGGAAGACTGAAGACTCCTTCAAGACCG
GAAGACTTCAAGCTCCAAGAATCCATTGAAGCTTCAGACTCGAGATCAAGCGTTCCAGTCCTCGAGACAAGAAACAACCTTGCAGGGGCATATACTAATGACAAG
TTTCTTATTAAGTATAATCCTTTGTTTGAACCTGATTCTGACGTAGTGACTGTCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGGCTGAGATTCAGGAA
CACATCAACACCTTGATGAAGGCAATTGAAGAAAAAGATTCTCAAATCGCGCAACTAAAGAGCCAAATTGAGAACCAACATATCGTCGAATCAAGTCAAACCCAA
GTCATAAAAAATCATGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGTGTTCTACTTCGGTCGCTTCACTATCCATCCAACAGCTCCAAGATATGATC
ACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTTCAAACCTTATACTAAGAGGATTGATAACTTGAGAACACCAATCGGGTAT
CAACCACCGAAATTTCAGCAGTTTGATGGAAAGGGCAATCCTAAACAATATATTGCTCACTTCGTTGAGACATGCGAGAATGCTGGTACTCGAGGGGACCTACTA
GTCAAACAGTTCGTTCGAACACTTAAAGGAAATGTTTTTGACTGGTACACTGATCTAGAACCTGAGTCAATAAACAGTTGGGAAGAACTCGAAAGAGAGTTTTTG
AATTGCTTCTACAGCACTAGACGAACCGTTAGCATGTTCAAGCTCACCAATACTAAACAACAAAAAGGTGAACTCGTTGTTAACTATATAAATCGCTGGAGAGCT
ATGAGTTTAGATTGCAAAGATCGCCTCACTGAACTCTCTTCCGTTGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCT
CGCACCTTTGAGGAACTAGCAACTCACGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTCCTGCCTAACATGAGAAAAGAAGAAAAG
AACGACGAAGAGACTATAGAAGAATCTATGGTTGTCAACACAACCCTTCCCAAGTCATTTTCGAAAGAAAACCAACAAACAAATGGAGCGCATCACCTAACTTTA
AAGGAAAGACAGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGTTGGAACAACTACTGGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAATGA
Protein sequenceShow/hide protein sequence
MSTGRGEDGDGFPVPIPASHFNPHPHGKFAGIGGRSPRGPGPQGKWTSLLRSKTLQDINISGRLKTPSRPEDFKLQESIEASDSRSSVPVLETRNNLAGAYTNDK
FLIKYNPLFEPDSDVVTVMMTETRTMEERMAEIQEHINTLMKAIEEKDSQIAQLKSQIENQHIVESSQTQVIKNHDKGKTIVQDDQPQCSTSVASLSIQQLQDMI
TNCIRAQYGGPTQDSLLYFKPYTKRIDNLRTPIGYQPPKFQQFDGKGNPKQYIAHFVETCENAGTRGDLLVKQFVRTLKGNVFDWYTDLEPESINSWEELEREFL
NCFYSTRRTVSMFKLTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLPNMRKEEK
NDEETIEESMVVNTTLPKSFSKENQQTNGAHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCK