| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035445.1 putative polyprotein [Cucumis melo var. makuwa] | 2.0e-22 | 45.73 | Show/hide |
Query: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDI--RCKFQEGFTTFQSWNSFCLRY-------YFPETPQEVEDMRRIPYA------------------
MD KT LN N EKSIY+ Q E FI +DQ+QK+I C ++ +S +F + Y P+T QEVEDM IPYA
Subjt: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDI--RCKFQEGFTTFQSWNSFCLRY-------YFPETPQEVEDMRRIPYA------------------
Query: --LGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
+ IVS+YQS P + W +KNILKYLRR ++ MLVYG+KDL+ GYT+ D +TDKD RKSTS
Subjt: --LGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
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| KAA0048708.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-24 | 49.08 | Show/hide |
Query: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGF----TTFQSWN----SFCLRYYFPETPQEVEDMRRIP--------------------Y
MD KT LN N E SI++SQ E FI Q Q+QK CK +SWN + P+T QEVEDMRRIP Y
Subjt: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGF----TTFQSWN----SFCLRYYFPETPQEVEDMRRIP--------------------Y
Query: ALGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
A+GIVS+YQS P D W VK ILKYLRR R+ MLVYG KDLI GYTD D +TDKD RK TS
Subjt: ALGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
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| KAA0056663.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-21 | 41.94 | Show/hide |
Query: DGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGFTTFQSWNSFCLRYYFPETPQEVEDMRRIPYALGI--------------------VSKYQ
D KT LN N E+SIY++Q E FI + Q+QK+ + +G +++ + + P+TPQEV+D+R+IPYA + VS+YQ
Subjt: DGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGFTTFQSWNSFCLRYYFPETPQEVEDMRRIPYALGI--------------------VSKYQ
Query: SIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTSV
+ P D W TVKNILKYL+R ++ MLVYGTKDLI GY D D +TDKD ++ ++
Subjt: SIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTSV
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| KAA0060399.1 gag/pol protein [Cucumis melo var. makuwa] | 6.9e-23 | 47.24 | Show/hide |
Query: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGF----TTFQSWN----SFCLRYYFPETPQEVEDMRRIP--------------------Y
MD KT LN N E+SI++SQ E FI Q Q+QK CK +SWN + P+TPQEVEDMRRI Y
Subjt: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGF----TTFQSWN----SFCLRYYFPETPQEVEDMRRIP--------------------Y
Query: ALGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
A+GIVS+YQS P + W VK ILKYL+R R+ MLVY KDLI GY D D +TDKD RKSTS
Subjt: ALGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
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| KAA0066439.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 1.2e-22 | 42.86 | Show/hide |
Query: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDI--RCKFQEGFTT---------FQSWNSFCLRYYFP---------ETPQEVEDMRRIPYA-------
MD KT L N E+SIY+ Q E FI + Q+QK++ C ++ + Q+ L Y + +TPQEVEDM IPYA
Subjt: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDI--RCKFQEGFTT---------FQSWNSFCLRYYFP---------ETPQEVEDMRRIPYA-------
Query: -------------LGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
+GIVS+YQS PR D W TVKNILKYLRR ++C+L+YG+KDLI GYTD + +TDK +RKSTS
Subjt: -------------LGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T1X5 Putative polyprotein | 9.7e-23 | 45.73 | Show/hide |
Query: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDI--RCKFQEGFTTFQSWNSFCLRY-------YFPETPQEVEDMRRIPYA------------------
MD KT LN N EKSIY+ Q E FI +DQ+QK+I C ++ +S +F + Y P+T QEVEDM IPYA
Subjt: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDI--RCKFQEGFTTFQSWNSFCLRY-------YFPETPQEVEDMRRIPYA------------------
Query: --LGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
+ IVS+YQS P + W +KNILKYLRR ++ MLVYG+KDL+ GYT+ D +TDKD RKSTS
Subjt: --LGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
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| A0A5A7U0I1 Gag/pol protein | 1.8e-24 | 49.08 | Show/hide |
Query: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGF----TTFQSWN----SFCLRYYFPETPQEVEDMRRIP--------------------Y
MD KT LN N E SI++SQ E FI Q Q+QK CK +SWN + P+T QEVEDMRRIP Y
Subjt: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGF----TTFQSWN----SFCLRYYFPETPQEVEDMRRIP--------------------Y
Query: ALGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
A+GIVS+YQS P D W VK ILKYLRR R+ MLVYG KDLI GYTD D +TDKD RK TS
Subjt: ALGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
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| A0A5A7V3R3 Gag/pol protein | 3.3e-23 | 47.24 | Show/hide |
Query: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGF----TTFQSWN----SFCLRYYFPETPQEVEDMRRIP--------------------Y
MD KT LN N E+SI++SQ E FI Q Q+QK CK +SWN + P+TPQEVEDMRRI Y
Subjt: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGF----TTFQSWN----SFCLRYYFPETPQEVEDMRRIP--------------------Y
Query: ALGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
A+GIVS+YQS P + W VK ILKYL+R R+ MLVY KDLI GY D D +TDKD RKSTS
Subjt: ALGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
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| A0A5A7VMA1 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 5.7e-23 | 42.86 | Show/hide |
Query: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDI--RCKFQEGFTT---------FQSWNSFCLRYYFP---------ETPQEVEDMRRIPYA-------
MD KT L N E+SIY+ Q E FI + Q+QK++ C ++ + Q+ L Y + +TPQEVEDM IPYA
Subjt: MDGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDI--RCKFQEGFTT---------FQSWNSFCLRYYFP---------ETPQEVEDMRRIPYA-------
Query: -------------LGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
+GIVS+YQS PR D W TVKNILKYLRR ++C+L+YG+KDLI GYTD + +TDK +RKSTS
Subjt: -------------LGIVSKYQSIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTS
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| A0A5D3C0C2 Gag/pol protein | 8.2e-22 | 41.94 | Show/hide |
Query: DGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGFTTFQSWNSFCLRYYFPETPQEVEDMRRIPYALGI--------------------VSKYQ
D KT LN N E+SIY++Q E FI + Q+QK+ + +G +++ + + P+TPQEV+D+R+IPYA + VS+YQ
Subjt: DGKTILLNSNHEKSIYVSQTEWFIYQDQKQKDIRCKFQEGFTTFQSWNSFCLRYYFPETPQEVEDMRRIPYALGI--------------------VSKYQ
Query: SIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTSV
+ P D W TVKNILKYL+R ++ MLVYGTKDLI GY D D +TDKD ++ ++
Subjt: SIPRFDLWKTVKNILKYLRRKRNCMLVYGTKDLIFIGYTDMDSKTDKDLRKSTSV
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