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Lag0011313 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011313
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr1:21047875..21051890
RNA-Seq ExpressionLag0011313
SyntenyLag0011313
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030477929.1 uncharacterized protein LOC115694963 [Cannabis sativa]1.2e-3370.91Show/hide
Query:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT
        L IGEARPTTVTLQL DR + +PE KIEDVLV+VDKFIF ADFIILDYEADR+VPIILGR FLAT  TL DVQ GELTM +NDQKV FNV   +++PD+ 
Subjt:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT

Query:  KECDMVEHID
        +EC  +  ID
Subjt:  KECDMVEHID

XP_030478287.1 uncharacterized protein LOC115695357 [Cannabis sativa]1.2e-3370.91Show/hide
Query:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT
        L IGEARPTTVTLQL DR + +PE KIEDVLV+VDKFIF ADFIILDYEADR+VPIILGR FLAT  TL DVQ GELTM +NDQKV FNV   +++PD+ 
Subjt:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT

Query:  KECDMVEHID
        +EC  +  ID
Subjt:  KECDMVEHID

XP_030497888.1 uncharacterized protein LOC115713544 [Cannabis sativa]1.2e-3368.1Show/hide
Query:  GGQLVLLWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTL
        G   + L IGEARPTTVTLQLVDR + +PE KIEDV V+VDKFIF ADFIILDYEAD+EVPIILGR FLAT  TL DVQ GELTM +NDQKV FNV   +
Subjt:  GGQLVLLWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTL

Query:  KYPDDTKECDMVEHID
        ++PD+ +EC  +  ID
Subjt:  KYPDDTKECDMVEHID

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]8.1e-3370Show/hide
Query:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT
        L IGEARPTTVTLQL DR + +PE KIEDVLV+VDKFIF ADFIILDYEADR+VPIILGR FLAT  TL DVQ  ELTM +NDQKV FNV   +++PD+ 
Subjt:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT

Query:  KECDMVEHID
        +EC  +  ID
Subjt:  KECDMVEHID

XP_030504924.1 uncharacterized protein LOC115719886 [Cannabis sativa]1.2e-3370.91Show/hide
Query:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT
        L IGEARPTTVTLQL DR + +PE KIEDVLV+VDKFIF ADFIILDYEADR+VPIILGR FLAT  TL DVQ GELTM +NDQKV FNV   +++PD+ 
Subjt:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT

Query:  KECDMVEHID
        +EC  +  ID
Subjt:  KECDMVEHID

TrEMBL top hitse value%identityAlignment
A0A6J1CPJ3 uncharacterized protein LOC1110129471.4e-3068.87Show/hide
Query:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT
        L IG+A PTTVTL L DR +  PE KIEDVLVKVDKFIF ADFIILD EAD++VPIILGR FLAT  TL DV+KGELTM ++DQKV FN+   +KYPDD 
Subjt:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT

Query:  KECDMV
        +EC ++
Subjt:  KECDMV

A0A6J1DY39 uncharacterized protein LOC1110256539.0e-3068.27Show/hide
Query:  IGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDTKE
        IG+A PTTVTLQL DR +  PE KIEDVLVKVDKFIF  DFIILD EAD++VPIILGR FLAT  TL DV+KGELTM ++DQKV FN+   +KY DD +E
Subjt:  IGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDTKE

Query:  CDMV
        C ++
Subjt:  CDMV

A0A6J1DZC3 uncharacterized protein LOC1110244493.1e-3069.9Show/hide
Query:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT
        L IG+A PTTVTLQL DR +  PE KIEDVLVKVDKFIF ADFIIL+ EAD++VPIILGR FL+T  TL DV+KGELTM ++DQKV FN+   +KYPDD 
Subjt:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT

Query:  KEC
        +EC
Subjt:  KEC

A0A6J1GJ68 uncharacterized protein LOC1114543441.5e-2966.04Show/hide
Query:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT
        L IGEARPTTVTLQL DR +  PE KIED+L++VDKFIF ADFIILDYEAD +VPIILGR FL T  TL DV KG +T+ M DQKV FN++ ++KYP   
Subjt:  LWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDT

Query:  KECDMV
        +EC  V
Subjt:  KECDMV

U5CWW5 Uncharacterized protein3.4e-2959.84Show/hide
Query:  RDQGLEQLPPRGGQLVLLWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMND
        +D G   +P   G    L IGEARPTTVTLQL DR + +PE KIEDVLV+VDKFIF ADFIILDYE DREVPIILGR FLAT  TL DV+KGELTM   D
Subjt:  RDQGLEQLPPRGGQLVLLWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFIILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMND

Query:  QKVVFNVSTTLKYPDDTKECDMVEHID
        ++  F V   ++ PD   EC  +  +D
Subjt:  QKVVFNVSTTLKYPDDTKECDMVEHID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTATTATCAGCGGGATCCTCCCAGAACTCCAGATTTTTTGGAATATGTTTCAACTCCAATGAAGCTCTATCGATCAAGCACTAGACAACTGGCTATTCCTAACTC
AGGCATAAAACCCAACATTTTGTCCCCTCGATATGACCGTGATCAAGGTTTAGAGCAACTGCCACCGAGGGGTGGTCAGCTAGTCCTCCTCTGGATTGGAGAAGCACGCC
CAACCACTGTCACGCTTCAACTAGTAGATAGACCAGTGGTAAATCCTGAAGAAAAAATCGAGGATGTTCTGGTGAAAGTTGACAAATTTATTTTTCTAGCGGATTTCATT
ATACTGGACTACGAAGCTGATAGGGAAGTTCCCATTATTTTGGGAAGATTGTTCCTAGCAACTAACAATACATTAACTGATGTGCAAAAAGGAGAGCTCACCATGTGCAT
GAATGATCAAAAAGTAGTTTTTAATGTGTCCACCACATTAAAGTACCCAGACGACACTAAGGAATGCGACATGGTGGAACACATAGATGTATGTTCCCCAATGGAAATTC
TGCAACTAAATGCGCTCAGAGCTGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTATTATCAGCGGGATCCTCCCAGAACTCCAGATTTTTTGGAATATGTTTCAACTCCAATGAAGCTCTATCGATCAAGCACTAGACAACTGGCTATTCCTAACTC
AGGCATAAAACCCAACATTTTGTCCCCTCGATATGACCGTGATCAAGGTTTAGAGCAACTGCCACCGAGGGGTGGTCAGCTAGTCCTCCTCTGGATTGGAGAAGCACGCC
CAACCACTGTCACGCTTCAACTAGTAGATAGACCAGTGGTAAATCCTGAAGAAAAAATCGAGGATGTTCTGGTGAAAGTTGACAAATTTATTTTTCTAGCGGATTTCATT
ATACTGGACTACGAAGCTGATAGGGAAGTTCCCATTATTTTGGGAAGATTGTTCCTAGCAACTAACAATACATTAACTGATGTGCAAAAAGGAGAGCTCACCATGTGCAT
GAATGATCAAAAAGTAGTTTTTAATGTGTCCACCACATTAAAGTACCCAGACGACACTAAGGAATGCGACATGGTGGAACACATAGATGTATGTTCCCCAATGGAAATTC
TGCAACTAAATGCGCTCAGAGCTGCGTGA
Protein sequenceShow/hide protein sequence
MQYYQRDPPRTPDFLEYVSTPMKLYRSSTRQLAIPNSGIKPNILSPRYDRDQGLEQLPPRGGQLVLLWIGEARPTTVTLQLVDRPVVNPEEKIEDVLVKVDKFIFLADFI
ILDYEADREVPIILGRLFLATNNTLTDVQKGELTMCMNDQKVVFNVSTTLKYPDDTKECDMVEHIDVCSPMEILQLNALRAA