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Lag0011326 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011326
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr1:21526332..21526700
RNA-Seq ExpressionLag0011326
SyntenyLag0011326
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]3.0e-2557.28Show/hide
Query:  VNPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAA
        VNPI +ADDRAR IR+YAAP   + NPGIVRP ++  +FELKPV FQML    QF G   EDPH HL+SFL + + F I GV+ E L++ LFP+SL D A
Subjt:  VNPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAA

Query:  KVW
        + W
Subjt:  KVW

ERM93434.1 hypothetical protein AMTR_s03373p00007640 [Amborella trichopoda]3.9e-2555.88Show/hide
Query:  NPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAAK
        NPI +ADDRAR IR+YAAP   + N GIVRP ++   FELKPV FQML    QFGGS  EDPH H++SFL + + F + GV+ E L++ LFP+SL D A+
Subjt:  NPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAAK

Query:  VW
         W
Subjt:  VW

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]3.3e-2453.27Show/hide
Query:  NLPVNPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLE-TERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSL
        N   NPI +A DR R +R+YA+P   +F PGI++PT E   RFE+KPV  QML AA QFGG+  EDPH+HLKSFL IC+ F + GV ++ +++ LFP+SL
Subjt:  NLPVNPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLE-TERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSL

Query:  TDAAKVW
         D A+ W
Subjt:  TDAAKVW

XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]1.4e-2555.88Show/hide
Query:  NPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAAK
        NPI +ADDR R IR+YAAP   + NPGIVRP ++   FELKPV FQML    QFGGS  EDPH H++SFL + + F + GV+ E L++ LFP+SL D A+
Subjt:  NPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAAK

Query:  VW
         W
Subjt:  VW

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]4.7e-2656.86Show/hide
Query:  NPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAAK
        NPI +ADDRAR IR+YAAP   + NPGIVRP ++   FELKPV FQML    QFGGS  EDPH H++SFL + + F + GV+ E L++ LFP+SL D A+
Subjt:  NPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAAK

Query:  VW
         W
Subjt:  VW

TrEMBL top hitse value%identityAlignment
A0A6J1EEI2 uncharacterized protein LOC1114333943.7e-2148.62Show/hide
Query:  NPQNLPVNPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPY
        N + +  N I +ADDR R IR YA P   + NP I+RP ++   FELKPV FQML    QF G  +EDPH HLKSFL + + F    V ++ +++ LFPY
Subjt:  NPQNLPVNPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPY

Query:  SLTDAAKVW
        SL D AK W
Subjt:  SLTDAAKVW

A0A6J1H7E4 uncharacterized protein LOC1114611681.5e-2250.46Show/hide
Query:  NPQNLPVNPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPY
        N + +  N IQ+ADDR R IR YA P   + NP I+RP ++   FELKPV FQML    QF G  +EDPH HLKSFL + + F   GV ++ +++ LFPY
Subjt:  NPQNLPVNPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPY

Query:  SLTDAAKVW
        SL D AK W
Subjt:  SLTDAAKVW

U5CUI2 Retrotrans_gag domain-containing protein1.5e-2557.28Show/hide
Query:  VNPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAA
        VNPI +ADDRAR IR+YAAP   + NPGIVRP ++  +FELKPV FQML    QF G   EDPH HL+SFL + + F I GV+ E L++ LFP+SL D A
Subjt:  VNPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAA

Query:  KVW
        + W
Subjt:  KVW

U5CUK7 Uncharacterized protein1.9e-2555.88Show/hide
Query:  NPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAAK
        NPI +ADDRAR IR+YAAP   + N GIVRP ++   FELKPV FQML    QFGGS  EDPH H++SFL + + F + GV+ E L++ LFP+SL D A+
Subjt:  NPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAAK

Query:  VW
         W
Subjt:  VW

W9RHB3 Putative disease resistance RPP13-like protein 13.7e-2150.51Show/hide
Query:  MADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAAKVWF
        + DDR R IRD+A P     NP IVRP +E   FELKPV FQML    QF G   +DPH HL+ F+ + + F +PGV  E L++ LFP+SL D A+ WF
Subjt:  MADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAAKVWF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGCCAAACCCTCAAAATCTGCCAGTGAATCCTATACAAATGGCTGATGATAGAGCAAGAGGAATTAGAGATTATGCAGCCCCAACAAATTGTGATTTTAACCC
AGGAATTGTGCGTCCGACATTGGAAACTGAAAGGTTCGAGCTAAAACCAGTTAAGTTTCAAATGTTAACTGCTGCAAGACAGTTTGGAGGAAGTGTAGCAGAAGATCCTC
ACTCGCATCTCAAATCATTCCTATATATATGTAACAAATTCATCATTCCCGGAGTGACTCGGGAGCAATTACAGGTCATCCTTTTCCCCTACTCTCTAACAGATGCTGCT
AAAGTCTGGTTCAGAATCAGCAACCTGCAAATTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCGCCAAACCCTCAAAATCTGCCAGTGAATCCTATACAAATGGCTGATGATAGAGCAAGAGGAATTAGAGATTATGCAGCCCCAACAAATTGTGATTTTAACCC
AGGAATTGTGCGTCCGACATTGGAAACTGAAAGGTTCGAGCTAAAACCAGTTAAGTTTCAAATGTTAACTGCTGCAAGACAGTTTGGAGGAAGTGTAGCAGAAGATCCTC
ACTCGCATCTCAAATCATTCCTATATATATGTAACAAATTCATCATTCCCGGAGTGACTCGGGAGCAATTACAGGTCATCCTTTTCCCCTACTCTCTAACAGATGCTGCT
AAAGTCTGGTTCAGAATCAGCAACCTGCAAATTCCATAG
Protein sequenceShow/hide protein sequence
MAAPNPQNLPVNPIQMADDRARGIRDYAAPTNCDFNPGIVRPTLETERFELKPVKFQMLTAARQFGGSVAEDPHSHLKSFLYICNKFIIPGVTREQLQVILFPYSLTDAA
KVWFRISNLQIP