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Lag0011327 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011327
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr1:21526738..21527495
RNA-Seq ExpressionLag0011327
SyntenyLag0011327
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022926214.1 uncharacterized protein LOC111433394 [Cucurbita moschata]1.5e-3337.8Show/hide
Query:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA
        ED+TLS+AWERFK +L++C  HGLPH                          +LSKT +EA+ IL+ IA NN +W    D +  P + + G  E+D+L++
Subjt:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA

Query:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQ
        +NA++ +++  +  L             T  +I Q     C  CGE H  DQCPSNP S+FYVG    QG   NNPFSNTY PGWRNHPNFSW G  +  
Subjt:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQ

Query:  TQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-SSSNSLEAMMKEFMA
         Q       P  F   N+       Q N    G  Q   +   S+E+++KE+MA
Subjt:  TQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-SSSNSLEAMMKEFMA

XP_022929949.1 uncharacterized protein LOC111436411 [Cucurbita moschata]5.6e-3338.19Show/hide
Query:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA
        EDETLS+A ERFK +L++C  HGLPH                          +LSKT +EA+ IL+ IA NN +W    D +  P + + G  E+D+L++
Subjt:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA

Query:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQ
        +NA++ +++  +  L             T   I Q     C  CGE H  DQCPSNP S+FYVG    QG   NNPFSNTY PGWRNHPNFSW G +   
Subjt:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQ

Query:  TQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-SSSNSLEAMMKEFMA
         Q       P  F   N+       Q N    G  Q   +S  S+E+++KE+MA
Subjt:  TQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-SSSNSLEAMMKEFMA

XP_022960432.1 uncharacterized protein LOC111461168 [Cucurbita moschata]4.0e-3140.4Show/hide
Query:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA
        EDETLS+AWERFK +L++C  HGLPH                          +LSKT +EA+ IL+ IA NN +W    D +  P K + G  E+D+L++
Subjt:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA

Query:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYV---GPQGYACNNPFSNTYKPGWRNHPNFSWNGDAA
        +NA++ +++  +  L           A T  ++ Q     C  CGE H  DQCP NP S+ YV     QG   NNP SNTY PGWRNHPNFSW G  +
Subjt:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYV---GPQGYACNNPFSNTYKPGWRNHPNFSWNGDAA

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]4.0e-3137.5Show/hide
Query:  MEDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLT
        +EDET SDAWERFK LL++C  HG+PH                          +LSK+ +EA  IL+ IA NNY+W T      R V   +G  E+D+LT
Subjt:  MEDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLT

Query:  AVNAKIDALST--KMDALTASTTPLIA-QLNVVECKICGEGHVQDQCPSNPESVFYVGPQGY-ACNNPFSNTYKPGWRNHPNFSWNGDAAKQT---QQGN
        A+ A++ +++   K   +  S  P  A Q   + C  CG+GH  + CPSNP SV YVG Q +   NNP+SN+Y P W++HPNFSW G  A  +   Q   
Subjt:  AVNAKIDALST--KMDALTASTTPLIA-QLNVVECKICGEGHVQDQCPSNPESVFYVGPQGY-ACNNPFSNTYKPGWRNHPNFSWNGDAAKQT---QQGN

Query:  VNPVPRQFDTNNERTTQGHFQRNHSASGGDQGASSSNSLEAMMKEFMA
            P  F      + Q   Q+ H   G     S ++SLE++M+++MA
Subjt:  VNPVPRQFDTNNERTTQGHFQRNHSASGGDQGASSSNSLEAMMKEFMA

XP_030510138.1 uncharacterized protein LOC115724905 [Cannabis sativa]6.9e-3137.4Show/hide
Query:  MEDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLT
        +EDET SDAWERFK LL++C  HG+PH                          +LSK+ +EA  IL+ IA NNY+W T      R V   +G  E+D+LT
Subjt:  MEDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLT

Query:  AVNAKIDALST--KMDALTASTTPLIA-QLNVVECKICGEGHVQDQCPSNPESVFYVGPQGY-ACNNPFSNTYKPGWRNHPNFSWNGDAAKQT-QQGNVN
        A+ A++ +++   K   +  S  P  A Q   + C  CG+GH  + CPSNP SV YVG Q +   NNP+SN+Y P W++HPNFSW G  A  +  QG   
Subjt:  AVNAKIDALST--KMDALTASTTPLIA-QLNVVECKICGEGHVQDQCPSNPESVFYVGPQGY-ACNNPFSNTYKPGWRNHPNFSWNGDAAKQT-QQGNVN

Query:  PVPRQFDTNNERTTQGHFQRNHSASGGDQGASSSNSLEAMMKEFMA
                  +    G  Q+ H   G     S ++SLE++M+++MA
Subjt:  PVPRQFDTNNERTTQGHFQRNHSASGGDQGASSSNSLEAMMKEFMA

TrEMBL top hitse value%identityAlignment
A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129451.8e-2939.09Show/hide
Query:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA
        + E+L +AWERFK LL+RC  HG+P +                         L+SK   +A+ +L+ +A NNY+W +     ++ V    G YEID+L  
Subjt:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA

Query:  VNAKIDALSTKMDALTASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVGPQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQTQQGNVNPVP
        +  ++ ALS K+D L         Q ++V C++CG+ H  DQCP N ESV +VG      NNP+SNTY PGWRNHPNFSW+ +A      G  NP P
Subjt:  VNAKIDALSTKMDALTASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVGPQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQTQQGNVNPVP

A0A6J0ZYV0 uncharacterized protein LOC1104134131.8e-2939.09Show/hide
Query:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA
        + E+L +AWERFK LL+RC  HG+P +                         L+SK   +A+ +L+ +A NNY+W +     ++ V    G YEID+L  
Subjt:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA

Query:  VNAKIDALSTKMDALTASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVGPQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQTQQGNVNPVP
        +  ++ ALS K+D L         Q ++V C++CG+ H  DQCP N ESV +VG      NNP+SNTY PGWRNHPNFSW+ +A      G  NP P
Subjt:  VNAKIDALSTKMDALTASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVGPQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQTQQGNVNPVP

A0A6J1EEI2 uncharacterized protein LOC1114333947.2e-3437.8Show/hide
Query:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA
        ED+TLS+AWERFK +L++C  HGLPH                          +LSKT +EA+ IL+ IA NN +W    D +  P + + G  E+D+L++
Subjt:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA

Query:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQ
        +NA++ +++  +  L             T  +I Q     C  CGE H  DQCPSNP S+FYVG    QG   NNPFSNTY PGWRNHPNFSW G  +  
Subjt:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQ

Query:  TQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-SSSNSLEAMMKEFMA
         Q       P  F   N+       Q N    G  Q   +   S+E+++KE+MA
Subjt:  TQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-SSSNSLEAMMKEFMA

A0A6J1EQ90 uncharacterized protein LOC1114364112.7e-3338.19Show/hide
Query:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA
        EDETLS+A ERFK +L++C  HGLPH                          +LSKT +EA+ IL+ IA NN +W    D +  P + + G  E+D+L++
Subjt:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA

Query:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQ
        +NA++ +++  +  L             T   I Q     C  CGE H  DQCPSNP S+FYVG    QG   NNPFSNTY PGWRNHPNFSW G +   
Subjt:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQ

Query:  TQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-SSSNSLEAMMKEFMA
         Q       P  F   N+       Q N    G  Q   +S  S+E+++KE+MA
Subjt:  TQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-SSSNSLEAMMKEFMA

A0A6J1H7E4 uncharacterized protein LOC1114611682.0e-3140.4Show/hide
Query:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA
        EDETLS+AWERFK +L++C  HGLPH                          +LSKT +EA+ IL+ IA NN +W    D +  P K + G  E+D+L++
Subjt:  EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTA

Query:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYV---GPQGYACNNPFSNTYKPGWRNHPNFSWNGDAA
        +NA++ +++  +  L           A T  ++ Q     C  CGE H  DQCP NP S+ YV     QG   NNP SNTY PGWRNHPNFSW G  +
Subjt:  VNAKIDALSTKMDALT----------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYV---GPQGYACNNPFSNTYKPGWRNHPNFSWNGDAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGAAACCCTAAGCGATGCATGGGAACGTTTTAAGAGTTTGTTGCAAAGATGTCTAGACCATGGATTGCCCCATTATACATTGTTAAGTAAAACAAATGATGA
AGCGCATGCAATCCTTGATTGCATCGCACGAAACAACTATGAGTGGGGCACCACAGAGGACAAAAAGAAACGTCCAGTGAAGACCAGTTCAGGAGGTTATGAAATAGACT
CGTTGACCGCAGTGAATGCAAAGATTGATGCATTAAGTACAAAGATGGATGCGTTGACAGCAAGCACGACTCCTCTCATAGCGCAACTCAACGTAGTAGAATGCAAAATC
TGCGGAGAAGGACATGTGCAGGATCAGTGTCCTTCTAACCCAGAATCGGTGTTCTATGTGGGACCTCAAGGTTATGCATGCAACAATCCATTTTCAAATACATACAAACC
TGGATGGAGAAATCACCCCAACTTCTCATGGAATGGCGATGCGGCCAAACAAACGCAACAAGGTAACGTAAATCCTGTCCCTAGACAGTTTGATACTAACAATGAACGCA
CAACGCAGGGACACTTCCAGCGCAATCACAGTGCAAGCGGGGGTGACCAAGGTGCATCATCATCAAATTCGTTGGAAGCAATGATGAAAGAGTTCATGGCAAGTCAGAAG
GAATATATGGCAAAAAGGATGCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACGAAACCCTAAGCGATGCATGGGAACGTTTTAAGAGTTTGTTGCAAAGATGTCTAGACCATGGATTGCCCCATTATACATTGTTAAGTAAAACAAATGATGA
AGCGCATGCAATCCTTGATTGCATCGCACGAAACAACTATGAGTGGGGCACCACAGAGGACAAAAAGAAACGTCCAGTGAAGACCAGTTCAGGAGGTTATGAAATAGACT
CGTTGACCGCAGTGAATGCAAAGATTGATGCATTAAGTACAAAGATGGATGCGTTGACAGCAAGCACGACTCCTCTCATAGCGCAACTCAACGTAGTAGAATGCAAAATC
TGCGGAGAAGGACATGTGCAGGATCAGTGTCCTTCTAACCCAGAATCGGTGTTCTATGTGGGACCTCAAGGTTATGCATGCAACAATCCATTTTCAAATACATACAAACC
TGGATGGAGAAATCACCCCAACTTCTCATGGAATGGCGATGCGGCCAAACAAACGCAACAAGGTAACGTAAATCCTGTCCCTAGACAGTTTGATACTAACAATGAACGCA
CAACGCAGGGACACTTCCAGCGCAATCACAGTGCAAGCGGGGGTGACCAAGGTGCATCATCATCAAATTCGTTGGAAGCAATGATGAAAGAGTTCATGGCAAGTCAGAAG
GAATATATGGCAAAAAGGATGCGGTAG
Protein sequenceShow/hide protein sequence
MEDETLSDAWERFKSLLQRCLDHGLPHYTLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALSTKMDALTASTTPLIAQLNVVECKI
CGEGHVQDQCPSNPESVFYVGPQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQTQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGASSSNSLEAMMKEFMASQK
EYMAKRMR