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Lag0011330 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011330
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr1:21798253..21798646
RNA-Seq ExpressionLag0011330
SyntenyLag0011330
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036882.1 uncharacterized protein E6C27_scaffold2534G00010 [Cucumis melo var. makuwa]9.7e-1258.33Show/hide
Query:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMS
        A+ T   ++ E   +   SI EEKL VE S   STASGFRGR+QWRFTPG+N+S RQDFK  SGGQ+SR +S
Subjt:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMS

KAA0041109.1 hypothetical protein E6C27_scaffold128G00120 [Cucumis melo var. makuwa]6.3e-1156Show/hide
Query:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS
        A+ T   ++ E   +   SI EEK  VE S   STASGFRGR+QWRFTPG+N+S RQDFK  SGGQ+SR +S  S
Subjt:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS

KAA0065345.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]1.1e-1056Show/hide
Query:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS
        A+ T    + E   +   SIIEEK  VE S    TASGFRGR+QWRFTPG+N+S RQDFK  S GQ+SR MS  S
Subjt:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS

TYK02477.1 uncharacterized protein E5676_scaffold1738G001060 [Cucumis melo var. makuwa]3.3e-1261.33Show/hide
Query:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS
        A+ T   ++ E   Q   SI EEKL VE S  ASTASGFRGR+QWRFT G N+SGRQDFK  SGGQ+SR MS  S
Subjt:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS

TYK14494.1 uncharacterized protein E5676_scaffold15G00050 [Cucumis melo var. makuwa]2.8e-1158.67Show/hide
Query:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS
        A+ T   ++ E   +   SI+EEK V+E S   ST SG RGR+QWRFTPGVNVSG QDFKR SGG+  RQMSS S
Subjt:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS

TrEMBL top hitse value%identityAlignment
A0A5A7T0C1 Retrotrans_gag domain-containing protein4.7e-1258.33Show/hide
Query:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMS
        A+ T   ++ E   +   SI EEKL VE S   STASGFRGR+QWRFTPG+N+S RQDFK  SGGQ+SR +S
Subjt:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMS

A0A5A7TIG0 Reverse transcriptase3.0e-1156Show/hide
Query:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS
        A+ T   ++ E   +   SI EEK  VE S   STASGFRGR+QWRFTPG+N+S RQDFK  SGGQ+SR +S  S
Subjt:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS

A0A5A7VHT8 Retrotransposon protein, putative, Ty3-gypsy subclass5.2e-1156Show/hide
Query:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS
        A+ T    + E   +   SIIEEK  VE S    TASGFRGR+QWRFTPG+N+S RQDFK  S GQ+SR MS  S
Subjt:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS

A0A5D3BSR1 Retrotrans_gag domain-containing protein1.6e-1261.33Show/hide
Query:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS
        A+ T   ++ E   Q   SI EEKL VE S  ASTASGFRGR+QWRFT G N+SGRQDFK  SGGQ+SR MS  S
Subjt:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS

A0A5D3CU23 Retrotrans_gag domain-containing protein1.4e-1158.67Show/hide
Query:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS
        A+ T   ++ E   +   SI+EEK V+E S   ST SG RGR+QWRFTPGVNVSG QDFKR SGG+  RQMSS S
Subjt:  ARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCTGGCTTGAAGCAAGGGTAACTATTAGTGGCCGAGTACGAGAGAAAGTATACCAAGCTTTCACGAGTATAATAGAGGAGAAGTTAGTAGTGGAGCCTAGTCA
TTGGGCTTCAACAGCCAGCGGTTTCCGAGGTCGTAAGCAGTGGAGGTTCACACCTGGAGTGAATGTTTCAGGCCGTCAAGACTTTAAGCGTTGGTCTGGTGGCCAGTCAT
CAAGGCAGATGAGTTCAAGTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCTGGCTTGAAGCAAGGGTAACTATTAGTGGCCGAGTACGAGAGAAAGTATACCAAGCTTTCACGAGTATAATAGAGGAGAAGTTAGTAGTGGAGCCTAGTCA
TTGGGCTTCAACAGCCAGCGGTTTCCGAGGTCGTAAGCAGTGGAGGTTCACACCTGGAGTGAATGTTTCAGGCCGTCAAGACTTTAAGCGTTGGTCTGGTGGCCAGTCAT
CAAGGCAGATGAGTTCAAGTAGTTGA
Protein sequenceShow/hide protein sequence
MSFWLEARVTISGRVREKVYQAFTSIIEEKLVVEPSHWASTASGFRGRKQWRFTPGVNVSGRQDFKRWSGGQSSRQMSSSS