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Lag0011340 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011340
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:22176126..22177770
RNA-Seq ExpressionLag0011340
SyntenyLag0011340
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50891.1 hypothetical protein EZV62_023415 [Acer yangbiense]2.4e-0931.71Show/hide
Query:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAIILKYAVA-----LGNSIGEFIEAESDENGKLEGKNLRV
        +IL+++ +N D F  ++ +IW +   + I +   N F   F++ +   RV+ GG WSFD+A++    +      LG  IG+ +E +   +G   GK LRV
Subjt:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAIILKYAVA-----LGNSIGEFIEAESDENGKLEGKNLRV

Query:  KVRLDTSKPLSHTDQ-DCEAEGI
        +VR++  K LS   Q D   +G+
Subjt:  KVRLDTSKPLSHTDQ-DCEAEGI

TXG60503.1 hypothetical protein EZV62_015076 [Acer yangbiense]8.2e-1036.13Show/hide
Query:  RDFQSSVACKILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDA-IILKYAVALGN----SIGEFIEAESDENG
        +D    +  K+L+ + +N + F  L+ +IW   G V++ +   NLF+  F N   +NRVL+ G W F ++ I+L+ +   GN     IGE +E  S E+ 
Subjt:  RDFQSSVACKILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDA-IILKYAVALGN----SIGEFIEAESDENG

Query:  KLEGKNLRVKVRLDTSKPL
        +  GK +RVKVR+D +KPL
Subjt:  KLEGKNLRVKVRLDTSKPL

TXG61742.1 hypothetical protein EZV62_013105 [Acer yangbiense]1.5e-1137.04Show/hide
Query:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAI-ILKYAV--ALGNSIGEFIEAESDENGKLEGKNLRVKV
        KILS + +N D F  ++ KIW ++  + I +   N+F   FR++W   +V+ G  WSFD+A+ +L+  V   LG+ IGE ++ +   +G   GK +RV++
Subjt:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAI-ILKYAV--ALGNSIGEFIEAESDENGKLEGKNLRVKV

Query:  RLDTSKPL
        R+D +KPL
Subjt:  RLDTSKPL

TXG68287.1 hypothetical protein EZV62_003222 [Acer yangbiense]1.1e-0936.52Show/hide
Query:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAIIL----------KYAVALGNSIGEFIEAESDENGKLEG
        K+LST+++N D F NL+PKIW +   V I     N F   FR +  +  VL+GG W FD A+++          + A  LG+ I +  E +   +G   G
Subjt:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAIIL----------KYAVALGNSIGEFIEAESDENGKLEG

Query:  KNLRVKVRLDTSKPL
        K +RV+V +D  KPL
Subjt:  KNLRVKVRLDTSKPL

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]2.4e-0936.27Show/hide
Query:  RSEGGEFGCDGKENNRLVEIDNDDIDETDRDFQSSVACKILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAI
        + E GE    G+    + ++  D+I++ D+  Q S+ CK+L+ + I  + F N+MP+IW    NVKI +  KNLFLCKF+    K+++L  G W FD ++
Subjt:  RSEGGEFGCDGKENNRLVEIDNDDIDETDRDFQSSVACKILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAI

Query:  IL
        ++
Subjt:  IL

TrEMBL top hitse value%identityAlignment
A0A5C7H208 Uncharacterized protein1.2e-0931.71Show/hide
Query:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAIILKYAVA-----LGNSIGEFIEAESDENGKLEGKNLRV
        +IL+++ +N D F  ++ +IW +   + I +   N F   F++ +   RV+ GG WSFD+A++    +      LG  IG+ +E +   +G   GK LRV
Subjt:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAIILKYAVA-----LGNSIGEFIEAESDENGKLEGKNLRV

Query:  KVRLDTSKPLSHTDQ-DCEAEGI
        +VR++  K LS   Q D   +G+
Subjt:  KVRLDTSKPLSHTDQ-DCEAEGI

A0A5C7HTR2 DUF4283 domain-containing protein4.0e-1036.13Show/hide
Query:  RDFQSSVACKILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDA-IILKYAVALGN----SIGEFIEAESDENG
        +D    +  K+L+ + +N + F  L+ +IW   G V++ +   NLF+  F N   +NRVL+ G W F ++ I+L+ +   GN     IGE +E  S E+ 
Subjt:  RDFQSSVACKILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDA-IILKYAVALGN----SIGEFIEAESDENG

Query:  KLEGKNLRVKVRLDTSKPL
        +  GK +RVKVR+D +KPL
Subjt:  KLEGKNLRVKVRLDTSKPL

A0A5C7I045 Uncharacterized protein7.2e-1237.04Show/hide
Query:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAI-ILKYAV--ALGNSIGEFIEAESDENGKLEGKNLRVKV
        KILS + +N D F  ++ KIW ++  + I +   N+F   FR++W   +V+ G  WSFD+A+ +L+  V   LG+ IGE ++ +   +G   GK +RV++
Subjt:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAI-ILKYAV--ALGNSIGEFIEAESDENGKLEGKNLRVKV

Query:  RLDTSKPL
        R+D +KPL
Subjt:  RLDTSKPL

A0A5C7IG42 Uncharacterized protein5.2e-1036.52Show/hide
Query:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAIIL----------KYAVALGNSIGEFIEAESDENGKLEG
        K+LST+++N D F NL+PKIW +   V I     N F   FR +  +  VL+GG W FD A+++          + A  LG+ I +  E +   +G   G
Subjt:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAIIL----------KYAVALGNSIGEFIEAESDENGKLEG

Query:  KNLRVKVRLDTSKPL
        K +RV+V +D  KPL
Subjt:  KNLRVKVRLDTSKPL

A0A5C7III1 Uncharacterized protein1.2e-0934.29Show/hide
Query:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAIILKYAVALGNSIGEFIEAESDENGKLEGKNLRVKVRLD
        KI   + IN D F  +M + W ++  + I     N+F   F+    + RVL GG WSFD+  +LK  + LG  IG+ +E    ++G  +GK +R++V ++
Subjt:  KILSTQTINVDGFANLMPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAIILKYAVALGNSIGEFIEAESDENGKLEGKNLRVKVRLD

Query:  TSKPL
          KPL
Subjt:  TSKPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGAACGGAGAGGGAGGCAGCGACGCATGCGAAAACGAGGGGGCTGGTTCACACATGAAAGAGGAAGAGATGAGAGAGATCGTTGCAAGTTCTCTGTCGAGAGG
AAAGCAGGGCTATGAACAGAAGGGGCAACGGTCAAGTTTGCCAGTAGGGATCCGCCGGAGATCGGAAGGGGGCGAGTTCGGTTGTGATGGAAAGGAAAACAACAGATTGG
TCGAGATAGATAACGACGATATAGATGAAACCGACAGAGACTTCCAATCTTCAGTGGCTTGCAAAATATTATCGACCCAAACGATTAACGTGGATGGGTTTGCTAATCTA
ATGCCAAAGATTTGGGGATTGGAAGGGAATGTGAAAATTTCGACGGCAAGGAAGAATTTATTTCTCTGCAAATTTCGAAACCAGTGGTTCAAAAATAGAGTTCTAAAAGG
AGGGTCGTGGAGTTTCGACGACGCCATTATTCTGAAGTACGCGGTGGCGTTGGGTAACTCAATCGGAGAATTCATTGAAGCCGAATCAGATGAAAATGGAAAATTGGAAG
GCAAGAATCTCAGGGTCAAAGTCAGACTAGATACAAGCAAACCGCTCAGCCACACCGATCAAGACTGTGAGGCAGAGGGTATCGACGAAACCAAAGAAGGAAACTTTGGG
GTAGAGCTCAGAGAAAACAATAGCAGTAAATGGGGATACAAGGGACGGAAGATGGAAAACAGGGAATGGGGAATGAGAGGTAGGGGAATGGGAGCCTTTGGATTCGGTAG
GGGCAGAGGAAGGGAAGATAATATATCAAGGAAAGGTATGGAGGAGAGCGAAGGCAAAGGAAGTAGGAGTAGGGAGAGTTTGAATTCGAACTCGAGGAAGTATAACGAGG
GGTGGGTAGAGGAAGAGAGGGAACCAAATGAAACGGTGGAGAGAATGAAAGATCAGAGAAGAGAGGATTTGGATAGATCAGAGACAACAAGCCACGAAAGTAAGGGCAGA
AAAGAAGAAGTGGAATTAAAAAAAAAGTCAAGTGAACGAGCTAAAAAGGAGACACGTCAGGGAAAGATCTCGATTAAGGAGGATATCCTGGGTACAGAAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAGAACGGAGAGGGAGGCAGCGACGCATGCGAAAACGAGGGGGCTGGTTCACACATGAAAGAGGAAGAGATGAGAGAGATCGTTGCAAGTTCTCTGTCGAGAGG
AAAGCAGGGCTATGAACAGAAGGGGCAACGGTCAAGTTTGCCAGTAGGGATCCGCCGGAGATCGGAAGGGGGCGAGTTCGGTTGTGATGGAAAGGAAAACAACAGATTGG
TCGAGATAGATAACGACGATATAGATGAAACCGACAGAGACTTCCAATCTTCAGTGGCTTGCAAAATATTATCGACCCAAACGATTAACGTGGATGGGTTTGCTAATCTA
ATGCCAAAGATTTGGGGATTGGAAGGGAATGTGAAAATTTCGACGGCAAGGAAGAATTTATTTCTCTGCAAATTTCGAAACCAGTGGTTCAAAAATAGAGTTCTAAAAGG
AGGGTCGTGGAGTTTCGACGACGCCATTATTCTGAAGTACGCGGTGGCGTTGGGTAACTCAATCGGAGAATTCATTGAAGCCGAATCAGATGAAAATGGAAAATTGGAAG
GCAAGAATCTCAGGGTCAAAGTCAGACTAGATACAAGCAAACCGCTCAGCCACACCGATCAAGACTGTGAGGCAGAGGGTATCGACGAAACCAAAGAAGGAAACTTTGGG
GTAGAGCTCAGAGAAAACAATAGCAGTAAATGGGGATACAAGGGACGGAAGATGGAAAACAGGGAATGGGGAATGAGAGGTAGGGGAATGGGAGCCTTTGGATTCGGTAG
GGGCAGAGGAAGGGAAGATAATATATCAAGGAAAGGTATGGAGGAGAGCGAAGGCAAAGGAAGTAGGAGTAGGGAGAGTTTGAATTCGAACTCGAGGAAGTATAACGAGG
GGTGGGTAGAGGAAGAGAGGGAACCAAATGAAACGGTGGAGAGAATGAAAGATCAGAGAAGAGAGGATTTGGATAGATCAGAGACAACAAGCCACGAAAGTAAGGGCAGA
AAAGAAGAAGTGGAATTAAAAAAAAAGTCAAGTGAACGAGCTAAAAAGGAGACACGTCAGGGAAAGATCTCGATTAAGGAGGATATCCTGGGTACAGAAGGCTAG
Protein sequenceShow/hide protein sequence
MKENGEGGSDACENEGAGSHMKEEEMREIVASSLSRGKQGYEQKGQRSSLPVGIRRRSEGGEFGCDGKENNRLVEIDNDDIDETDRDFQSSVACKILSTQTINVDGFANL
MPKIWGLEGNVKISTARKNLFLCKFRNQWFKNRVLKGGSWSFDDAIILKYAVALGNSIGEFIEAESDENGKLEGKNLRVKVRLDTSKPLSHTDQDCEAEGIDETKEGNFG
VELRENNSSKWGYKGRKMENREWGMRGRGMGAFGFGRGRGREDNISRKGMEESEGKGSRSRESLNSNSRKYNEGWVEEEREPNETVERMKDQRREDLDRSETTSHESKGR
KEEVELKKKSSERAKKETRQGKISIKEDILGTEG