| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA3453657.1 reverse transcriptase [Gossypium australe] | 7.6e-59 | 34.66 | Show/hide |
Query: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSK--W
MKIL WNVRG+G PRT+R L+++ RR P I+F+ ETK ++E +RR F V + G GGL++ W+E L ++S+S HID + D+ +
Subjt: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSK--W
Query: WRFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEILF----------------------EGC-----------LTWEKKVRGSRVVKERLDRF
WRFTG Y P N+RK+ W LL L R ++ W++ D NEILF E C TWE+ ++ERLDR
Subjt: WRFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEILF----------------------EGC-----------LTWEKKVRGSRVVKERLDRF
Query: LATNEIKNIFKSIDIRHLSKHNSDHKAIV----AVLEKRPQE-------------NKKSWNKDMLKGSIQSAIRRKESEIGEIIAGSDVLKDLRLTKAEI
+A E +F + HL S+H IV + E R +E N +++ ++ I ++E G ++ D + +L E
Subjt: LATNEIKNIFKSIDIRHLSKHNSDHKAIV----AVLEKRPQE-------------NKKSWNKDMLKGSIQSAIRRKESEIGEIIAGSDVLKDLRLTKAEI
Query: ELENLMEEEEIYWKNILDGIQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLI
E +E +++ I+ + L A F +EE+ A+K + P KA +DG A+FYQ YW IVG VT CL+VLN +I +N T IVLI
Subjt: ELENLMEEEEIYWKNILDGIQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLI
Query: PKKKNPTRFEKFRPINLCNLIYKIIAK
PK+K+P KFRPI+LCN+IYKII+K
Subjt: PKKKNPTRFEKFRPINLCNLIYKIIAK
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| KAA3457419.1 reverse transcriptase [Gossypium australe] | 8.7e-55 | 30.1 | Show/hide |
Query: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTIT-DDSK-W
MK++CWNVRG+G+PR ++ LRH ++ NP+++F+ ETK ++E+VRR+ F V ++G GGL++ W+E + + +RS+S HID + DDS+
Subjt: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTIT-DDSK-W
Query: WRFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEILF----------------------EGCL-----------TWEKKVRGSRVVKERLDRF
WRFTG YG+P + +W +L +LSR++N W+V D EI++ E C+ TWE+ ++ERLDR
Subjt: WRFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEILF----------------------EGCL-----------TWEKKVRGSRVVKERLDRF
Query: LATNEIKNIFKSIDIRHLSKHNSDHKAI------VAVLEKRPQENKKSW------------------------NKDMLKGSIQ---------SAIRRKES
+A ++ ++F + I+HL SDH + V +L + + + ++W +L+G ++ I++K +
Subjt: LATNEIKNIFKSIDIRHLSKHNSDHKAI------VAVLEKRPQENKKSW------------------------NKDMLKGSIQ---------SAIRRKES
Query: EIGE--IIAGSDVLKDLRLTKAEIELENLMEEEEIYWKN----------------------------------ILDGIQL----------KISEDQCRFL
E E ++A D ++ +I L +++EE+YW+ + DGI++ K + L
Subjt: EIGE--IIAGSDVLKDLRLTKAEIELENLMEEEEIYWKN----------------------------------ILDGIQL----------KISEDQCRFL
Query: DAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLIYKIIAK
+PF +EE+++ALKGM KAP DG +F+Q YW IVG V CL VLNE +I N T IVLIPK PT FRPI+LC +IYK++ K
Subjt: DAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLIYKIIAK
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| KAA3460530.1 reverse transcriptase [Gossypium australe] | 1.0e-55 | 33.41 | Show/hide |
Query: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSKW--
MK L WNVRG+G+PR +R LR+ ++QNP ++F+ ETK ++EKVR+ V +EG GGL + W++D + RS+S H+D + +D
Subjt: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSKW--
Query: WRFTGLYGNPSTNKRKDLWNLLDKLS------RDSNLHWIVDEDLNEILFEGC------LTWEKKVRGSRVVKERLDRFLATNEIKNIFKSIDIRHLSKH
WRFTGLYG+P + +WNLL +LS RD I + L E G TWE+ ++ERLDR +A + +N+F I H
Subjt: WRFTGLYGNPSTNKRKDLWNLLDKLS------RDSNLHWIVDEDLNEILFEGC------LTWEKKVRGSRVVKERLDRFLATNEIKNIFKSIDIRHLSKH
Query: NSDHKAIVA------------------------VLEKRPQENKKSWNKDML--------------------KGSIQSAIRRKESEIGEIIAGSDVLKDLR
SDH ++ E +E +S ++ ++ KG +Q + ++ + + D L+
Subjt: NSDHKAIVA------------------------VLEKRPQENKKSWNKDML--------------------KGSIQSAIRRKESEIGEIIAGSDVLKDLR
Query: LTK------AEIELENLMEEE-EIYWKN------------ILDGIQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARV
++K EI E+ +EEE ++Y++N IL+GI+ IS + L APF +EE++ ALKGM P+K P DG A+F+Q YW IVG V
Subjt: LTK------AEIELENLMEEE-EIYWKN------------ILDGIQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARV
Query: THVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLIYKIIAK
CL VLNE + NST IVLI K PT FRPI+LC ++YKI+AK
Subjt: THVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLIYKIIAK
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| XP_015895368.1 uncharacterized protein LOC107429231 [Ziziphus jujuba] | 1.3e-58 | 34.98 | Show/hide |
Query: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSKWWR
MK+L WN RG+ NPRT RA + +NP+I+F+ ET ++E++R + F V GGLA+FW+ D +Q++SYSVGHID+ I K W
Subjt: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSKWWR
Query: F-TGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEIL----------FEGC-LTWEKKVRGSRVVKERLDRFLATNEIKNIFKSIDIRHLSKHNS
+ TG YGNP N+R W LL +L S+ W V D NEIL F G TW G V+E LDR + E + +F ++++RHL S
Subjt: F-TGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEIL----------FEGC-LTWEKKVRGSRVVKERLDRFLATNEIKNIFKSIDIRHLSKHNS
Query: DHKAIVAVLEKRPQEN---------KKSWNKDM----LKGSI--QSAIRRKESEIGEIIAGSDVLKDLRLTKAEIEL---ENLMEE-EEIYWKNILDGIQ
DH I+ L+ + N + W K++ + G++ ++ ++ + I + G + D ++ ++ L +NL + +++L G+
Subjt: DHKAIVAVLEKRPQEN---------KKSWNKDM----LKGSI--QSAIRRKESEIGEIIAGSDVLKDLRLTKAEIEL---ENLMEE-EEIYWKNILDGIQ
Query: LKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLI
++S++ L PF +E+K +L M+P+KAP DG A+F+Q YW IVG ++T CL+VLN + D+ +N T I LIPK K P + +RPI+LC +I
Subjt: LKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLI
Query: YKIIAK
YK+I+K
Subjt: YKIIAK
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| XP_042958050.1 uncharacterized protein LOC122293561 [Carya illinoinensis] | 3.9e-55 | 32.87 | Show/hide |
Query: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDD--SKW
M +L WN RG+GNPR++R L + + P ++F+ ETKC ++E VRR LK D F V S G SGG+A+ W+E+ +Q+ SY+ H+ + ++ +
Subjt: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDD--SKW
Query: WRFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEIL----------------------FEGC-----------LTWEKKVRGSRVVKERLDRF
W FTG YG+P T KRK W LL+ L S++ W+ D NE+L E C TW RG KER+DR
Subjt: WRFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEIL----------------------FEGC-----------LTWEKKVRGSRVVKERLDRF
Query: LATNEIKNIFKSIDIR-HLSKHNSDHKAIVAVLEKRPQE-NKKSWNKDMLKGSIQSAIRRKESEIGEIIAGSDVLKDLRLTKAEIELENLMEEEEIYWK-
+A E + +F+ L HN + + K P KK +D K ++ ++ S + GS + + +L K +E+ + E++ W+
Subjt: LATNEIKNIFKSIDIR-HLSKHNSDHKAIVAVLEKRPQE-NKKSWNKDMLKGSIQSAIRRKESEIGEIIAGSDVLKDLRLTKAEIELENLMEEEEIYWK-
Query: ------------NILDGIQLKISEDQCR----FLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIV
+L L ++Q R +L PF +EE++ A+ MNP +P DG A FYQ +W++VG V LEVLN + +N T I
Subjt: ------------NILDGIQLKISEDQCR----FLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIV
Query: LIPKKKNPTRFEKFRPINLCNLIYKIIAK
LIP+ KNP R +FRPI+LCN++YKI++K
Subjt: LIPKKKNPTRFEKFRPINLCNLIYKIIAK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9HDH5 Uncharacterized protein | 8.5e-56 | 29.17 | Show/hide |
Query: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTI-TDDSKWW
M I+ WN RG+GN R + AL + + Q P I+F+ ETK + K+E +R L+F F F+VPS G+SGGLA+ W +D L I+++S+ HID + + W
Subjt: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTI-TDDSKWW
Query: RFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEIL--------------------------------FEGC-LTWEKKVRGSRVVKERLDRFL
RFTG YGNP ++R+ W LLDKL +L W++ D NEIL + G TWE V++RLDR L
Subjt: RFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEIL--------------------------------FEGC-LTWEKKVRGSRVVKERLDRFL
Query: ATNEIKNIFKSIDIRHLSKHNSDHKAIV---------AVLEKRPQE--------------NKKSWNKDMLKGS--------------------------I
A+N ++F I HL SDH I+ A ++RP++ +K W++ ++GS
Subjt: ATNEIKNIFKSIDIRHLSKHNSDHKAIV---------AVLEKRPQE--------------NKKSWNKDMLKGS--------------------------I
Query: QSAIRRKESEIGEIIAGSDV-LKDLRLTKAEIELENLMEEEEIYW----------------------------KNILDG---------------------
Q IR K + ++AG+ + ++ + + E+ +L+ EE++W KN + G
Subjt: QSAIRRKESEIGEIIAGSDV-LKDLRLTKAEIELENLMEEEEIYW----------------------------KNILDG---------------------
Query: --------------------IQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVL
++ +SE+ + L P+ EE++ AL M+PSKAP DG + F+Q YW IVG +T+ L +LN + +N T + L
Subjt: --------------------IQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVL
Query: IPKKKNPTRFEKFRPINLCNLIYKIIAK
IPKKKNP + +RPI+LCN++YKII+K
Subjt: IPKKKNPTRFEKFRPINLCNLIYKIIAK
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| A0A2N9HWG1 Reverse transcriptase domain-containing protein | 1.1e-58 | 30.51 | Show/hide |
Query: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTI-TDDSKWW
M I+ WN RG+GN R + AL + + Q P I+F+ ETK + K+E +R L+F F F+VPS G+SGGLA+ W +D L I+++S+ HID + + W
Subjt: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTI-TDDSKWW
Query: RFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEIL--------------------------------FEGC-LTWEKKVRGSRVVKERLDRFL
RFTG YGNP ++R++ W LLDKL +L W++ D NEIL + G TWE +++RLDR L
Subjt: RFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEIL--------------------------------FEGC-LTWEKKVRGSRVVKERLDRFL
Query: ATNEIKNIFKSIDIRHLSKHNSDHKAIV---------AVLEKRPQE--------------NKKSWNKDMLKGS--------------------------I
A+N ++F I HL SDH I+ A ++RP++ +K W+++ GS
Subjt: ATNEIKNIFKSIDIRHLSKHNSDHKAIV---------AVLEKRPQE--------------NKKSWNKDMLKGS--------------------------I
Query: QSAIRRKESEIGEIIAGSDV-LKDLRLTKAEIELENLMEEEEIYWK------------------------------------NILDGIQLKISEDQCRFL
Q IR K + ++AG+ + ++ + + E+ +L+ EE++W+ L ++ +SE+ + L
Subjt: QSAIRRKESEIGEIIAGSDV-LKDLRLTKAEIELENLMEEEEIYWK------------------------------------NILDGIQLKISEDQCRFL
Query: DAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLIYKIIAK
P+ EE++ AL M+PSKAP DG + F+Q YW IVG ++ L VLN + +N T + LIPKKKNP + +RPI+LCN++YKII+K
Subjt: DAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLIYKIIAK
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| A0A5B6U9Z8 Reverse transcriptase | 3.7e-59 | 34.66 | Show/hide |
Query: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSK--W
MKIL WNVRG+G PRT+R L+++ RR P I+F+ ETK ++E +RR F V + G GGL++ W+E L ++S+S HID + D+ +
Subjt: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSK--W
Query: WRFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEILF----------------------EGC-----------LTWEKKVRGSRVVKERLDRF
WRFTG Y P N+RK+ W LL L R ++ W++ D NEILF E C TWE+ ++ERLDR
Subjt: WRFTGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEILF----------------------EGC-----------LTWEKKVRGSRVVKERLDRF
Query: LATNEIKNIFKSIDIRHLSKHNSDHKAIV----AVLEKRPQE-------------NKKSWNKDMLKGSIQSAIRRKESEIGEIIAGSDVLKDLRLTKAEI
+A E +F + HL S+H IV + E R +E N +++ ++ I ++E G ++ D + +L E
Subjt: LATNEIKNIFKSIDIRHLSKHNSDHKAIV----AVLEKRPQE-------------NKKSWNKDMLKGSIQSAIRRKESEIGEIIAGSDVLKDLRLTKAEI
Query: ELENLMEEEEIYWKNILDGIQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLI
E +E +++ I+ + L A F +EE+ A+K + P KA +DG A+FYQ YW IVG VT CL+VLN +I +N T IVLI
Subjt: ELENLMEEEEIYWKNILDGIQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLI
Query: PKKKNPTRFEKFRPINLCNLIYKIIAK
PK+K+P KFRPI+LCN+IYKII+K
Subjt: PKKKNPTRFEKFRPINLCNLIYKIIAK
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| A0A5B6UR53 Reverse transcriptase | 5.0e-56 | 33.41 | Show/hide |
Query: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSKW--
MK L WNVRG+G+PR +R LR+ ++QNP ++F+ ETK ++EKVR+ V +EG GGL + W++D + RS+S H+D + +D
Subjt: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSKW--
Query: WRFTGLYGNPSTNKRKDLWNLLDKLS------RDSNLHWIVDEDLNEILFEGC------LTWEKKVRGSRVVKERLDRFLATNEIKNIFKSIDIRHLSKH
WRFTGLYG+P + +WNLL +LS RD I + L E G TWE+ ++ERLDR +A + +N+F I H
Subjt: WRFTGLYGNPSTNKRKDLWNLLDKLS------RDSNLHWIVDEDLNEILFEGC------LTWEKKVRGSRVVKERLDRFLATNEIKNIFKSIDIRHLSKH
Query: NSDHKAIVA------------------------VLEKRPQENKKSWNKDML--------------------KGSIQSAIRRKESEIGEIIAGSDVLKDLR
SDH ++ E +E +S ++ ++ KG +Q + ++ + + D L+
Subjt: NSDHKAIVA------------------------VLEKRPQENKKSWNKDML--------------------KGSIQSAIRRKESEIGEIIAGSDVLKDLR
Query: LTK------AEIELENLMEEE-EIYWKN------------ILDGIQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARV
++K EI E+ +EEE ++Y++N IL+GI+ IS + L APF +EE++ ALKGM P+K P DG A+F+Q YW IVG V
Subjt: LTK------AEIELENLMEEE-EIYWKN------------ILDGIQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARV
Query: THVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLIYKIIAK
CL VLNE + NST IVLI K PT FRPI+LC ++YKI+AK
Subjt: THVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLIYKIIAK
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| A0A6P4B957 uncharacterized protein LOC107429231 | 6.3e-59 | 34.98 | Show/hide |
Query: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSKWWR
MK+L WN RG+ NPRT RA + +NP+I+F+ ET ++E++R + F V GGLA+FW+ D +Q++SYSVGHID+ I K W
Subjt: MKILCWNVRGMGNPRTIRALRHETRRQNPNIIFISETKCGLNKVEKVRRDLKFDFAFSVPSEGKSGGLAIFWQEDSTLQIRSYSVGHIDTTITDDSKWWR
Query: F-TGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEIL----------FEGC-LTWEKKVRGSRVVKERLDRFLATNEIKNIFKSIDIRHLSKHNS
+ TG YGNP N+R W LL +L S+ W V D NEIL F G TW G V+E LDR + E + +F ++++RHL S
Subjt: F-TGLYGNPSTNKRKDLWNLLDKLSRDSNLHWIVDEDLNEIL----------FEGC-LTWEKKVRGSRVVKERLDRFLATNEIKNIFKSIDIRHLSKHNS
Query: DHKAIVAVLEKRPQEN---------KKSWNKDM----LKGSI--QSAIRRKESEIGEIIAGSDVLKDLRLTKAEIEL---ENLMEE-EEIYWKNILDGIQ
DH I+ L+ + N + W K++ + G++ ++ ++ + I + G + D ++ ++ L +NL + +++L G+
Subjt: DHKAIVAVLEKRPQEN---------KKSWNKDM----LKGSI--QSAIRRKESEIGEIIAGSDVLKDLRLTKAEIEL---ENLMEE-EEIYWKNILDGIQ
Query: LKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLI
++S++ L PF +E+K +L M+P+KAP DG A+F+Q YW IVG ++T CL+VLN + D+ +N T I LIPK K P + +RPI+LC +I
Subjt: LKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLIPKKKNPTRFEKFRPINLCNLI
Query: YKIIAK
YK+I+K
Subjt: YKIIAK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 1.7e-05 | 29.46 | Show/hide |
Query: ELENLMEEEEIYWKNILDGIQL-KISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVL
+LENL E + LD L ++++++ L+ P EI + + K+P DG A FYQ Y + + + + + E I+L
Subjt: ELENLMEEEEIYWKNILDGIQL-KISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVL
Query: IPKK-KNPTRFEKFRPINLCNLIYKIIAK
IPK ++ T+ E FRPI+L N+ KI+ K
Subjt: IPKK-KNPTRFEKFRPINLCNLIYKIIAK
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| P08548 LINE-1 reverse transcriptase homolog | 7.8e-06 | 26.35 | Show/hide |
Query: RRKESEIGEIIAGSDVLKDLRLTKAEIELENLMEE--EEIY---WKNI------LDGIQL-KISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHA
+R +S I I G+D +T E++ ++ E +++Y ++N+ L+ L ++S+ + L+ P EI + ++ + K+P DG +
Subjt: RRKESEIGEIIAGSDVLKDLRLTKAEIELENLMEE--EEIY---WKNI------LDGIQL-KISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHA
Query: MFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLIPKK-KNPTRFEKFRPINLCNLIYKIIAK
FYQ + + + + ++ + E I LIPK K+PTR E +RPI+L N+ KI+ K
Subjt: MFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVLIPKK-KNPTRFEKFRPINLCNLIYKIIAK
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| P11369 LINE-1 retrotransposable element ORF2 protein | 1.3e-08 | 33.33 | Show/hide |
Query: ELENLMEEEEIYWKNILDGIQL-KISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVL
+LENL E ++ LD Q+ K+++DQ L++P +EI+ + + K+P DG A FYQ + + + + + ++ E T I L
Subjt: ELENLMEEEEIYWKNILDGIQL-KISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIVL
Query: IPK-KKNPTRFEKFRPINLCNLIYKIIAK
IPK +K+PT+ E FRPI+L N+ KI+ K
Subjt: IPK-KKNPTRFEKFRPINLCNLIYKIIAK
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 8.3e-08 | 31.62 | Show/hide |
Query: KNILDGIQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIV--LIPKKKNPTRFEK
+ + DG+ + +SE + L+ P +E+ AL+ M +K+P DG F+Q +WD +G V E + PL+ + V L+PKK + +
Subjt: KNILDGIQLKISEDQCRFLDAPFVKEEIKTALKGMNPSKAPEEDGAHAMFYQNYWDIVGARVTHVCLEVLNEDTDIGPLNSTKIV--LIPKKKNPTRFEK
Query: FRPINLCNLIYKIIAKA
+RP++L + YKI+AKA
Subjt: FRPINLCNLIYKIIAKA
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