; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011342 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011342
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr1:22192947..22196152
RNA-Seq ExpressionLag0011342
SyntenyLag0011342
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6734747.1 hypothetical protein I3842_01G285500 [Carya illinoinensis]3.3e-7839.52Show/hide
Query:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL
        N N  E     + M +   + GSP +DPN HL  FL+IC TVKINGV+ED IRLRLFPFSL+DKAR  LQS+ PGSI +W  + + FL KFFPPAKT +L
Subjt:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL

Query:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVF
        R+EIG F+Q   E  +EAWER+K+L+R+CPQHG PDWLQVQ+FYNGL   T+TIVDAA+GGTL+SKT E A  LLE+MA+N+YQWP+ER+  KK+ AG+ 
Subjt:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVF

Query:  EVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALA------------------------------------------------------------SR
        E++ ++AL AQ+ +L++     +     QS E  A+ +                                                            S+
Subjt:  EVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALA------------------------------------------------------------SR

Query:  PQEETIEQLEDLVGAFIAESSNRTTKLEEAVIAINTTVNGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQ-EEAEEEPESEDYD
        P E+ +  LED + +F+ E++ R  K +  +  I T  +   A +KN+E Q+ QL   ++   +G   +  E    E CKAIT+   +E E  P  E   
Subjt:  PQEETIEQLEDLVGAFIAESSNRTTKLEEAVIAINTTVNGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQ-EEAEEEPESEDYD

Query:  TPTGEAEEDTSSDEAEKPE------------------PEPHIPSATLMVPKEKKKKKKKKNNQVQFDKFMNAFMNLNINIPFAEALE-MPQYFYLL
        TPT  A    S D+ E+ E                    P I +  L  P+  +K+K  K    QF KF++ F  ++INIPFA+ALE MP Y   L
Subjt:  TPTGEAEEDTSSDEAEKPE------------------PEPHIPSATLMVPKEKKKKKKKKNNQVQFDKFMNAFMNLNINIPFAEALE-MPQYFYLL

KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]3.3e-7839.52Show/hide
Query:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL
        N N  E     + M +   + GSP +DPN HL  FL+IC TVKINGV+ED IRLRLFPFSL+DKAR  LQS+ PGSI +W  + + FL KFFPPAKT +L
Subjt:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL

Query:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVF
        R+EIG F+Q   E  +EAWER+K+L+R+CPQHG PDWLQVQ+FYNGL   T+TIVDAA+GGTL+SKT E A  LLE+MA+N+YQWP+ER+  KK+ AG+ 
Subjt:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVF

Query:  EVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALA------------------------------------------------------------SR
        E++ ++AL AQ+ +L++     +     QS E  A+ +                                                            S+
Subjt:  EVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALA------------------------------------------------------------SR

Query:  PQEETIEQLEDLVGAFIAESSNRTTKLEEAVIAINTTVNGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQ-EEAEEEPESEDYD
        P E+ +  LED + +F+ E++ R  K +  +  I T  +   A +KN+E Q+ QL   ++   +G   +  E    E CKAIT+   +E E  P  E   
Subjt:  PQEETIEQLEDLVGAFIAESSNRTTKLEEAVIAINTTVNGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQ-EEAEEEPESEDYD

Query:  TPTGEAEEDTSSDEAEKPE------------------PEPHIPSATLMVPKEKKKKKKKKNNQVQFDKFMNAFMNLNINIPFAEALE-MPQYFYLL
        TPT  A    S D+ E+ E                    P I +  L  P+  +K+K  K    QF KF++ F  ++INIPFA+ALE MP Y   L
Subjt:  TPTGEAEEDTSSDEAEKPE------------------PEPHIPSATLMVPKEKKKKKKKKNNQVQFDKFMNAFMNLNINIPFAEALE-MPQYFYLL

KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]4.3e-7839.8Show/hide
Query:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL
        N N  E     + M +   + GSP +DPN HL  FL+IC TVKINGV+ED IRLRLFPFSL+DKAR  LQS+ PGSI +W  + + FL KFFPPAKT +L
Subjt:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL

Query:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVF
        R+EIG F+Q   E  +EAWER+K+L+R+CPQHG PDWLQVQ+FYNGL   T+TIVDAA+GGTL+SKT E A  LLE+MA+N+YQWP+ER+  KK+ AG+ 
Subjt:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVF

Query:  EVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALA------------------------------------------------------------SR
        +++ ++AL AQ+ +L++     +     QS E  A+ +                                                            S+
Subjt:  EVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALA------------------------------------------------------------SR

Query:  PQEETIEQLEDLVGAFIAESSNRTTKLEEAVIAINTTVNGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQ-EEAEEEPESEDYD
        P E  +  LED + +F+ E++ R  K +  +  I T  +   AAIKNIE Q+ QL   ++   +G   +  E    E CKAIT+   +E E  P  E   
Subjt:  PQEETIEQLEDLVGAFIAESSNRTTKLEEAVIAINTTVNGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQ-EEAEEEPESEDYD

Query:  TPT----GEAEEDTSSDEAEKPEPE-------------PHIPSATLMVPKEKKKKKKKKNNQVQFDKFMNAFMNLNINIPFAEALE-MPQYFYLL
        TPT    G+++     DE      E             P I +  L  P+  +K+K  K    QF KF++ F  ++INIPFA+ALE MP Y   L
Subjt:  TPT----GEAEEDTSSDEAEKPEPE-------------PHIPSATLMVPKEKKKKKKKKNNQVQFDKFMNAFMNLNINIPFAEALE-MPQYFYLL

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.8e-8446.88Show/hide
Query:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL
        N N  E     + MAR+ A+RG   EDP+ HL+SFL+ICGTVK+NGVS DAI+LRLFPFSLQD+A+D L++I P SITTW+ L Q FL K+FPPAK+ +L
Subjt:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL

Query:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPK-KIAAGV
        RTEIGTF+Q  DEQ +EAWER+K+LLR+CPQHGYPDWLQ+QLFYNGL   TK+I+DA AGG++ SK  + A T+LED+AT SY WP ER++P    AAG+
Subjt:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPK-KIAAGV

Query:  FEVDKVSALQAQMTSLANAFMKFSGTGSAQ----SIESAAALASR---------------------------------------------------PQ--
        +EVD+V++L+AQM SL NA  K +  G AQ    SI S AALAS                                                    PQ  
Subjt:  FEVDKVSALQAQMTSLANAFMKFSGTGSAQ----SIESAAALASR---------------------------------------------------PQ--

Query:  ----EETIEQLEDLVGAFIAESSNRTTKLEEAVIAINTTVNGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQEEAEEEPESEDY
                  LED++  F+ ES +RTT LE +V AI +TV     A++N+E QL Q+   + TM KGK  +  E    E CKA+T+   +    P   D 
Subjt:  ----EETIEQLEDLVGAFIAESSNRTTKLEEAVIAINTTVNGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQEEAEEEPESEDY

Query:  D
        D
Subjt:  D

XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]2.1e-8047.88Show/hide
Query:  LGSHKLP-NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFF
        +G   LP N N  E     + M R+  +RG+ TEDPN+HL  FLD+CGTVK+NGV +DAIRLRLFP SLQDK                  +VQ FL  FF
Subjt:  LGSHKLP-NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFF

Query:  PPAKTVKLRTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTP
        PPAKT +LRTEI +F++   EQ FE WER+KELLRKCPQHG  +WLQ+Q+FYNGL   T+TI+DAAAGGTLLS+T ENA  LL+DMA NS+QWPSERS  
Subjt:  PPAKTVKLRTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTP

Query:  KKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALASRP-QEETIEQ-------------LEDLVGAFIAESSNRTTKLEEAVIAINTTV
        KK+ AG++E+D++S+L+AQ+ +L NA  K SG G++ S E  AA  +    E TIEQ             LEDL+GAFI E  +R +++E  V  +   +
Subjt:  KKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALASRP-QEETIEQ-------------LEDLVGAFIAESSNRTTKLEEAVIAINTTV

Query:  NGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQEEAEEEPESEDYDTPTGEAEEDTSSDEAEK
         G++ +IKN+E Q+ Q+   ++TM KGK  ++ E    E+CKA+T+   +  +EPE +  + P    EE  + +E  K
Subjt:  NGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQEEAEEEPESEDYDTPTGEAEEDTSSDEAEK

TrEMBL top hitse value%identityAlignment
A0A2I4F4C8 uncharacterized protein LOC1089953731.8e-6642.67Show/hide
Query:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL
        N N  E     + M +   +  SP +DPN HL  FL IC TVKINGV+ D IRLRLFPFSL+DKAR  LQS+  GSIT+W  + + FL KFFPPAKT +L
Subjt:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL

Query:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENART-LLEDMATNSYQWPSERSTPKK-----
        R+EI  F+Q   E  +EAWER+K L+R CPQHG P+WLQVQ+FYNGL   T+TIVDAAAGGTL+SKT+E A T LLE+M +N+YQWP+E++  KK     
Subjt:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENART-LLEDMATNSYQWPSERSTPKK-----

Query:  -----------IAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALASRPQEETIEQLEDLVGAFIAESSNRTTKLEEAVIAINTTVNGHSA
                   +AA    V    A Q Q+  + N    + G  S QS ++ +             LED + +F+ E++ R  K +  +  I+   +   A
Subjt:  -----------IAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALASRPQEETIEQLEDLVGAFIAESSNRTTKLEEAVIAINTTVNGHSA

Query:  AIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQ-EEAEEEPESEDYDTPTGEAEEDTSSDEAEKPEPEPHIPSATLMVP
        AIKNIE Q+ +L  +++   +G   +  E    E CKAIT+    E E  P  E   TPT  A    S ++ E+ E        T M+P
Subjt:  AIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQ-EEAEEEPESEDYDTPTGEAEEDTSSDEAEKPEPEPHIPSATLMVP

A0A2I4G4Q3 uncharacterized protein LOC1090047125.0e-6440Show/hide
Query:  MARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKLRTEIGTFQQQYDE
        M +   + GSP +DPN HL  FL+IC TVKINGV+ED IRLRLFPFSL+D+AR  LQS+ P SIT+W  + + F  KFFPPAKT +LR+EIG F+Q   E
Subjt:  MARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKLRTEIGTFQQQYDE

Query:  QQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVFEVDKVSALQAQMT
          +EAWE +K+L+R+CPQHG PDWLQVQ+FYNGL   T+TIVD  +GGTL+ KT+E A  LLE+MA+N+YQWP ER+  KK+A  + E++ ++AL AQ+ 
Subjt:  QQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVFEVDKVSALQAQMT

Query:  SLANAFMKFSGTGSAQSIE-----SAAALASRPQEETIE------------------------------------------------------QLEDLVG
        +L++     +     QS E     S   L++   +E ++                                                       LED + 
Subjt:  SLANAFMKFSGTGSAQSIE-----SAAALASRPQEETIE------------------------------------------------------QLEDLVG

Query:  AFIAESSNRTTKLEEAVIAINTTVNGHSAAI-KNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQ-EEAEEEPESEDYDTPT
        +FI E++ R  K +  +  I T  +   AAI KNIE Q+ QL   ++   +G   +  E    E CKAI +    E E + E E+    T
Subjt:  AFIAESSNRTTKLEEAVIAINTTVNGHSAAI-KNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQ-EEAEEEPESEDYDTPT

A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129451.4e-6638.74Show/hide
Query:  YRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKLRTEIGTFQQQYDEQQFEAW
        + G P++DPNSHL +FL+IC T K NGV++DAIRLRLFPFSL+DKA+  L S+  GSITTW+ L Q FL KFFPPAKT K+R +I +F Q   E  +EAW
Subjt:  YRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKLRTEIGTFQQQYDEQQFEAW

Query:  ERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVFEVDKVSALQAQMTSLANAF
        ERFKELLR+CP HG PDWLQVQ FYNGL    KTI+DAAAGG L+SK   +A  LLE+MA+N+YQWPSERS  +K A G +E+D +  L  Q+ +L+   
Subjt:  ERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVFEVDKVSALQAQMTSLANAF

Query:  MKFSGTGSAQS----IESAAALASRPQEETIEQLEDLVGAFIAESSN---------------------------------------------RTTKLEEA
        +   G  + Q+     E      S  Q     +    VG F  + +N                                             + ++LEE 
Subjt:  MKFSGTGSAQS----IESAAALASRPQEETIEQLEDLVGAFIAESSN---------------------------------------------RTTKLEEA

Query:  VI----AINTTVNGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQE--KTQMEYCKAIT---------VHQEEAEEEPESEDYDTPTGEAEEDTSSDEAE
        ++      +  +    A+++N+ETQ+ QL N ++   +G   ++ +      E C+AIT         V+Q+  E E E  D +   G  E +    + +
Subjt:  VI----AINTTVNGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQE--KTQMEYCKAIT---------VHQEEAEEEPESEDYDTPTGEAEEDTSSDEAE

Query:  KPEPEPHIPSATLMVPKEKKKKKKKKNNQVQFDKFMNAFMNLNINIPFAEALE-MPQYFYLL
          + E    S  +  P    ++ +K+  + QF KF+N F  L+INIPFAEALE MP Y   L
Subjt:  KPEPEPHIPSATLMVPKEKKKKKKKKNNQVQFDKFMNAFMNLNINIPFAEALE-MPQYFYLL

A0A6J1DU19 uncharacterized protein LOC1110243619.9e-8147.88Show/hide
Query:  LGSHKLP-NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFF
        +G   LP N N  E     + M R+  +RG+ TEDPN+HL  FLD+CGTVK+NGV +DAIRLRLFP SLQDK                  +VQ FL  FF
Subjt:  LGSHKLP-NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFF

Query:  PPAKTVKLRTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTP
        PPAKT +LRTEI +F++   EQ FE WER+KELLRKCPQHG  +WLQ+Q+FYNGL   T+TI+DAAAGGTLLS+T ENA  LL+DMA NS+QWPSERS  
Subjt:  PPAKTVKLRTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTP

Query:  KKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALASRP-QEETIEQ-------------LEDLVGAFIAESSNRTTKLEEAVIAINTTV
        KK+ AG++E+D++S+L+AQ+ +L NA  K SG G++ S E  AA  +    E TIEQ             LEDL+GAFI E  +R +++E  V  +   +
Subjt:  KKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALASRP-QEETIEQ-------------LEDLVGAFIAESSNRTTKLEEAVIAINTTV

Query:  NGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQEEAEEEPESEDYDTPTGEAEEDTSSDEAEK
         G++ +IKN+E Q+ Q+   ++TM KGK  ++ E    E+CKA+T+   +  +EPE +  + P    EE  + +E  K
Subjt:  NGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQEEAEEEPESEDYDTPTGEAEEDTSSDEAEK

A0A6P6XAQ1 Reverse transcriptase8.5e-6453.62Show/hide
Query:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL
        N N  E     + M +   Y G+ TEDPNSHL +FL+IC T+K NGVSEDAI+LRLFPFSL+DKA+  LQS  P + TTWD L + FL KFFPP KT KL
Subjt:  NTNPKENTGETLLMARDCAYRGSPTEDPNSHLKSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKL

Query:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVF
        R +I +F QQ  E  +EAWER++EL R+CP HG PDWL VQ FYNGLT  TKT VDAAAGG L+ KT E A+ L+E+MA N+YQW +ER   ++  AG+ 
Subjt:  RTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQLFYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVF

Query:  EVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAA
        EVD ++ L A+M ++     +  G+ S Q +  A+
Subjt:  EVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCTACCCTCTTTATGGCACGAGAGGGATTTCTGTTTGCTGGTTGGACCACAAACAGGTTGTTCATTAGAGGAACACTGGTACTTAAGGACCAAGAGGTAGCCCA
GGGCCAACTAATCTCATATCGTTGGAGCTTCGGATCTGTAGGTCCATTAGGTCCCACCGGTAGCTCACTAGGGGCGTTGAGAATTCTCCCAAGCCTTAGAATTCTTGGTT
CCCACAAGCTGCCCAATACTAATCCCAAAGAGAATACCGGTGAAACTCTTTTGATGGCTCGAGACTGTGCATACAGAGGATCACCCACCGAGGATCCAAATTCTCATCTT
AAATCATTCTTGGACATTTGTGGGACGGTGAAGATTAATGGAGTCTCTGAGGATGCTATTCGCTTACGTTTATTTCCCTTTTCTTTGCAGGATAAAGCACGAGATAGGTT
GCAGTCTATTACCCCTGGGAGCATCACCACCTGGGATGCTTTGGTCCAGGGCTTTTTAAAGAAATTTTTCCCTCCTGCAAAGACGGTCAAGCTAAGGACCGAGATTGGGA
CATTCCAACAACAATATGATGAGCAGCAGTTCGAAGCTTGGGAGCGATTCAAGGAGTTACTGAGGAAGTGTCCTCAGCATGGTTACCCCGATTGGCTTCAGGTACAGTTG
TTTTATAATGGTTTAACTCCTTGTACAAAAACGATTGTTGATGCAGCTGCAGGTGGGACTCTGTTGTCCAAGACCGTGGAAAACGCTCGCACACTTTTAGAGGATATGGC
CACCAACAGCTATCAGTGGCCATCTGAGCGGTCTACACCTAAAAAGATTGCTGCTGGAGTATTTGAGGTTGATAAAGTAAGTGCACTCCAGGCCCAAATGACCTCTCTTG
CTAATGCTTTTATGAAATTTTCAGGTACAGGGAGTGCACAGTCAATTGAATCAGCTGCTGCTTTAGCATCCAGACCTCAGGAGGAGACCATTGAACAGTTAGAAGATCTT
GTTGGAGCTTTCATTGCAGAGTCTAGTAACAGGACAACCAAATTAGAGGAGGCAGTCATTGCCATCAACACCACAGTGAATGGCCACAGTGCTGCCATCAAGAACATTGA
GACTCAGCTGAGACAGTTGGTGAATGTTGTGAGCACCATGAATAAAGGTAAGGCCCTAGCTGAGCAAGAGAAAACCCAGATGGAGTACTGTAAAGCAATCACTGTGCACC
AGGAGGAAGCTGAAGAGGAACCTGAGTCTGAGGATTATGACACGCCTACAGGGGAAGCTGAGGAGGACACATCATCAGATGAGGCTGAAAAGCCTGAACCTGAGCCTCAT
ATTCCTTCTGCCACACTGATGGTTCCCAAGGAAAAGAAAAAGAAAAAGAAGAAAAAGAACAATCAGGTTCAGTTTGATAAATTTATGAATGCTTTTATGAATCTGAATAT
TAATATTCCTTTTGCAGAGGCATTAGAGATGCCCCAATACTTTTACTTGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCTACCCTCTTTATGGCACGAGAGGGATTTCTGTTTGCTGGTTGGACCACAAACAGGTTGTTCATTAGAGGAACACTGGTACTTAAGGACCAAGAGGTAGCCCA
GGGCCAACTAATCTCATATCGTTGGAGCTTCGGATCTGTAGGTCCATTAGGTCCCACCGGTAGCTCACTAGGGGCGTTGAGAATTCTCCCAAGCCTTAGAATTCTTGGTT
CCCACAAGCTGCCCAATACTAATCCCAAAGAGAATACCGGTGAAACTCTTTTGATGGCTCGAGACTGTGCATACAGAGGATCACCCACCGAGGATCCAAATTCTCATCTT
AAATCATTCTTGGACATTTGTGGGACGGTGAAGATTAATGGAGTCTCTGAGGATGCTATTCGCTTACGTTTATTTCCCTTTTCTTTGCAGGATAAAGCACGAGATAGGTT
GCAGTCTATTACCCCTGGGAGCATCACCACCTGGGATGCTTTGGTCCAGGGCTTTTTAAAGAAATTTTTCCCTCCTGCAAAGACGGTCAAGCTAAGGACCGAGATTGGGA
CATTCCAACAACAATATGATGAGCAGCAGTTCGAAGCTTGGGAGCGATTCAAGGAGTTACTGAGGAAGTGTCCTCAGCATGGTTACCCCGATTGGCTTCAGGTACAGTTG
TTTTATAATGGTTTAACTCCTTGTACAAAAACGATTGTTGATGCAGCTGCAGGTGGGACTCTGTTGTCCAAGACCGTGGAAAACGCTCGCACACTTTTAGAGGATATGGC
CACCAACAGCTATCAGTGGCCATCTGAGCGGTCTACACCTAAAAAGATTGCTGCTGGAGTATTTGAGGTTGATAAAGTAAGTGCACTCCAGGCCCAAATGACCTCTCTTG
CTAATGCTTTTATGAAATTTTCAGGTACAGGGAGTGCACAGTCAATTGAATCAGCTGCTGCTTTAGCATCCAGACCTCAGGAGGAGACCATTGAACAGTTAGAAGATCTT
GTTGGAGCTTTCATTGCAGAGTCTAGTAACAGGACAACCAAATTAGAGGAGGCAGTCATTGCCATCAACACCACAGTGAATGGCCACAGTGCTGCCATCAAGAACATTGA
GACTCAGCTGAGACAGTTGGTGAATGTTGTGAGCACCATGAATAAAGGTAAGGCCCTAGCTGAGCAAGAGAAAACCCAGATGGAGTACTGTAAAGCAATCACTGTGCACC
AGGAGGAAGCTGAAGAGGAACCTGAGTCTGAGGATTATGACACGCCTACAGGGGAAGCTGAGGAGGACACATCATCAGATGAGGCTGAAAAGCCTGAACCTGAGCCTCAT
ATTCCTTCTGCCACACTGATGGTTCCCAAGGAAAAGAAAAAGAAAAAGAAGAAAAAGAACAATCAGGTTCAGTTTGATAAATTTATGAATGCTTTTATGAATCTGAATAT
TAATATTCCTTTTGCAGAGGCATTAGAGATGCCCCAATACTTTTACTTGCTTTGA
Protein sequenceShow/hide protein sequence
MGPTLFMAREGFLFAGWTTNRLFIRGTLVLKDQEVAQGQLISYRWSFGSVGPLGPTGSSLGALRILPSLRILGSHKLPNTNPKENTGETLLMARDCAYRGSPTEDPNSHL
KSFLDICGTVKINGVSEDAIRLRLFPFSLQDKARDRLQSITPGSITTWDALVQGFLKKFFPPAKTVKLRTEIGTFQQQYDEQQFEAWERFKELLRKCPQHGYPDWLQVQL
FYNGLTPCTKTIVDAAAGGTLLSKTVENARTLLEDMATNSYQWPSERSTPKKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESAAALASRPQEETIEQLEDL
VGAFIAESSNRTTKLEEAVIAINTTVNGHSAAIKNIETQLRQLVNVVSTMNKGKALAEQEKTQMEYCKAITVHQEEAEEEPESEDYDTPTGEAEEDTSSDEAEKPEPEPH
IPSATLMVPKEKKKKKKKKNNQVQFDKFMNAFMNLNINIPFAEALEMPQYFYLL