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Lag0011349 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011349
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr1:22391320..22392489
RNA-Seq ExpressionLag0011349
SyntenyLag0011349
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2005540.1 hypothetical protein ES319_D11G277400v1 [Gossypium barbadense]1.2e-1033.87Show/hide
Query:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE
        + D + D +     ++N + L + +  V   G QW + K    + Q  YLK   K    F+R   +P++H ST+S +R+L  +A+L   +I+VGKII+ E
Subjt:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE

Query:  MFGCWKKKEGKPLFPNTITMLCSR
        +  C KKK     FP+  T LC R
Subjt:  MFGCWKKKEGKPLFPNTITMLCSR

TYG37159.1 hypothetical protein ES288_D13G120000v1 [Gossypium darwinii]9.4e-1132.26Show/hide
Query:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE
        + D ++D +     +++ + L + +  V   G+QW + K    + +  YLK  +K    F+R   +P+ H ST+S E++LL + +L   +I++GKII+ E
Subjt:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE

Query:  MFGCWKKKEGKPLFPNTITMLCSR
        +  C K K G   FP+ IT LC R
Subjt:  MFGCWKKKEGKPLFPNTITMLCSR

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]2.7e-1035.34Show/hide
Query:  DLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNEMFGCWK
        ++   K  ++N + L + +  V   G+QW +      + Q  YLK  +K    F+R   +P++H ST+S E +LL +A+L   +I+VGKII+ E+  C K
Subjt:  DLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNEMFGCWK

Query:  KKEGKPLFPNTITMLC
        KK     FP+ IT LC
Subjt:  KKEGKPLFPNTITMLC

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]1.2e-1033.61Show/hide
Query:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE
        + D + D +     ++N + L + +  V   G+QW + K    + +  YLK  +     F++   +P++H  T+S ER+LL +A+L   +I+VGKII+ E
Subjt:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE

Query:  MFGCWKKKEGKPLFPNTITMLC
        +  C KKK G   FP+ IT LC
Subjt:  MFGCWKKKEGKPLFPNTITMLC

TYI22425.1 hypothetical protein ES332_A06G102500v1 [Gossypium tomentosum]7.2e-1132.26Show/hide
Query:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE
        + D + D +     ++N + L + +  +   G+QW + K    + Q  YLK  +K    F+R   +P++H ST+  E++L  + +L   +I+VGKII+ E
Subjt:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE

Query:  MFGCWKKKEGKPLFPNTITMLCSR
        +  C KKK G   FP+ IT +C R
Subjt:  MFGCWKKKEGKPLFPNTITMLCSR

TrEMBL top hitse value%identityAlignment
A0A5D1ZYC3 Uncharacterized protein4.6e-1132.26Show/hide
Query:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE
        + D ++D +     +++ + L + +  V   G+QW + K    + +  YLK  +K    F+R   +P+ H ST+S E++LL + +L   +I++GKII+ E
Subjt:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE

Query:  MFGCWKKKEGKPLFPNTITMLCSR
        +  C K K G   FP+ IT LC R
Subjt:  MFGCWKKKEGKPLFPNTITMLCSR

A0A5D2B8V0 Uncharacterized protein1.3e-1035.34Show/hide
Query:  DLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNEMFGCWK
        ++   K  ++N + L + +  V   G+QW +      + Q  YLK  +K    F+R   +P++H ST+S E +LL +A+L   +I+VGKII+ E+  C K
Subjt:  DLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNEMFGCWK

Query:  KKEGKPLFPNTITMLC
        KK     FP+ IT LC
Subjt:  KKEGKPLFPNTITMLC

A0A5D2MA47 Uncharacterized protein6.0e-1133.61Show/hide
Query:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE
        + D + D +     ++N + L + +  V   G+QW + K    + +  YLK  +     F++   +P++H  T+S ER+LL +A+L   +I+VGKII+ E
Subjt:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE

Query:  MFGCWKKKEGKPLFPNTITMLC
        +  C KKK G   FP+ IT LC
Subjt:  MFGCWKKKEGKPLFPNTITMLC

A0A5D2Q4A4 Uncharacterized protein3.5e-1132.26Show/hide
Query:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE
        + D + D +     ++N + L + +  +   G+QW + K    + Q  YLK  +K    F+R   +P++H ST+  E++L  + +L   +I+VGKII+ E
Subjt:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE

Query:  MFGCWKKKEGKPLFPNTITMLCSR
        +  C KKK G   FP+ IT +C R
Subjt:  MFGCWKKKEGKPLFPNTITMLCSR

A0A5J5PJ67 Uncharacterized protein6.0e-1133.87Show/hide
Query:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE
        + D + D +     ++N + L + +  V   G QW + K    + Q  YLK   K    F+R   +P++H ST+S +R+L  +A+L   +I+VGKII+ E
Subjt:  IADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDSTVSRERVLLAFAVLRSLTIDVGKIIVNE

Query:  MFGCWKKKEGKPLFPNTITMLCSR
        +  C KKK     FP+  T LC R
Subjt:  MFGCWKKKEGKPLFPNTITMLCSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAACAAGAAGATGGTCAAAAGGGTATGGAAGATGTTGCTGCCATGGTAGTTGAAGAGGACCCGAAAGAACCAGAAGAACAAAATCCAAGTAGAATGAACAGAGA
GTTGCACATACAGAGGAAGCTCAAGAAGAGGTTCAAGAAAAAAAACAGAATGAAGATGTGCGAGAAGAACAGGCAGAGGTTGCACCTGAAGGAGATAATGAGCCAGTACA
GGAGGCTCGAGTGGAGAGAAAATGCAGAGAAAGAAGAGCGAGAGAAAAAAGAAGCTGAGGAAAAAGTGAAAGAAGACGCAGAGAAGAAAGCTGAGGAAGCGCGGTTGCTC
AAGCGAAGGGCGGAAAAGGAGCAAAAAGCAAAATACTCTGAGCTGCTGAAAAGAGACTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGTATTTTCTAAAGACCGG
TATTGCAGACCACGACAGGGATTTGTTTTGTGCGAAGCCTGAGTCTGTAAATGCTGAGCAGCTAAGTGAGGCTGTGCGGGAGGTAGGTATTGAAGGGGCACAGTGGCGAC
TGTCCAAGACAGAGAAGAGGACGTTCCAGTCGGCTTATTTGAAAAAGGGAAGCAAACACATGGATGGATTTATCAGACAAAGGATGCTTCCAATGACACACGACTCGACA
GTCTCAAGGGAACGAGTTCTTCTAGCTTTTGCGGTTTTGCGGTCTCTCACCATTGACGTAGGAAAGATCATTGTTAATGAAATGTTTGGATGTTGGAAGAAAAAGGAGGG
GAAGCCGCTTTTTCCGAACACGATCACTATGTTATGCAGCAGGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAACAAGAAGATGGTCAAAAGGGTATGGAAGATGTTGCTGCCATGGTAGTTGAAGAGGACCCGAAAGAACCAGAAGAACAAAATCCAAGTAGAATGAACAGAGA
GTTGCACATACAGAGGAAGCTCAAGAAGAGGTTCAAGAAAAAAAACAGAATGAAGATGTGCGAGAAGAACAGGCAGAGGTTGCACCTGAAGGAGATAATGAGCCAGTACA
GGAGGCTCGAGTGGAGAGAAAATGCAGAGAAAGAAGAGCGAGAGAAAAAAGAAGCTGAGGAAAAAGTGAAAGAAGACGCAGAGAAGAAAGCTGAGGAAGCGCGGTTGCTC
AAGCGAAGGGCGGAAAAGGAGCAAAAAGCAAAATACTCTGAGCTGCTGAAAAGAGACTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGTATTTTCTAAAGACCGG
TATTGCAGACCACGACAGGGATTTGTTTTGTGCGAAGCCTGAGTCTGTAAATGCTGAGCAGCTAAGTGAGGCTGTGCGGGAGGTAGGTATTGAAGGGGCACAGTGGCGAC
TGTCCAAGACAGAGAAGAGGACGTTCCAGTCGGCTTATTTGAAAAAGGGAAGCAAACACATGGATGGATTTATCAGACAAAGGATGCTTCCAATGACACACGACTCGACA
GTCTCAAGGGAACGAGTTCTTCTAGCTTTTGCGGTTTTGCGGTCTCTCACCATTGACGTAGGAAAGATCATTGTTAATGAAATGTTTGGATGTTGGAAGAAAAAGGAGGG
GAAGCCGCTTTTTCCGAACACGATCACTATGTTATGCAGCAGGACATGA
Protein sequenceShow/hide protein sequence
MEEQEDGQKGMEDVAAMVVEEDPKEPEEQNPSRMNRELHIQRKLKKRFKKKNRMKMCEKNRQRLHLKEIMSQYRRLEWRENAEKEEREKKEAEEKVKEDAEKKAEEARLL
KRRAEKEQKAKYSELLKRDFLFERGFSGDLPYFLKTGIADHDRDLFCAKPESVNAEQLSEAVREVGIEGAQWRLSKTEKRTFQSAYLKKGSKHMDGFIRQRMLPMTHDST
VSRERVLLAFAVLRSLTIDVGKIIVNEMFGCWKKKEGKPLFPNTITMLCSRT