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Lag0011354 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011354
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA polymerase II transcriptional coactivator KIWI-like
Genome locationchr1:22533215..22533878
RNA-Seq ExpressionLag0011354
SyntenyLag0011354
Gene Ontology termsGO:0060261 - positive regulation of transcription initiation from RNA polymerase II promoter (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR003173 - Transcriptional coactivator p15 (PC4), C-terminal
IPR009044 - ssDNA-binding transcriptional regulator
IPR045125 - RNA polymerase II transcriptional coactivator Sub1/Tcp4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603408.1 RNA polymerase II transcriptional coactivator KIWI, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3193.51Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDDEDH SEGDAPPKKTF+KDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG S
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

KAG7033606.1 RNA polymerase II transcriptional coactivator KIWI [Cucurbita argyrosperma subsp. argyrosperma]1.6e-3694.12Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSSHHRFLFSL
        MSARGKRKDDEDH SEGDAPPKKTF+KDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSSHHR LFSL
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSSHHRFLFSL

XP_022925285.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita moschata]1.6e-3194.81Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDDEDHASEGDAPPKKT KKDSEE DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG S
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

XP_022966500.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Cucurbita maxima]2.4e-3289.66Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSSHHRFLFSLSL
        MSARGKRKDDEDHASEGDAPPKKTFKKDSEE DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG       FSLSL
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSSHHRFLFSLSL

XP_023518433.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita pepo subsp. pepo]7.0e-3294.81Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDDEDHASEGDAPPKKTFKKDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG S
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

TrEMBL top hitse value%identityAlignment
A0A6J1D8A4 RNA polymerase II transcriptional coactivator KIWI-like isoform X28.3e-3192.21Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDD++HASEGDAPPKKT KKDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG S
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

A0A6J1EHI0 RNA polymerase II transcriptional coactivator KIWI-like7.5e-3294.81Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDDEDHASEGDAPPKKT KKDSEE DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG S
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

A0A6J1EXX8 RNA polymerase II transcriptional coactivator KIWI-like isoform X26.4e-3192.11Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGS
        MSARGKRKDDEDH  EGDAPPKKTF+KDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG+
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGS

A0A6J1EYI2 RNA polymerase II transcriptional coactivator KIWI-like isoform X14.9e-3192.21Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDDEDH  EGDAPPKKTF+KDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG S
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

A0A6J1HRT2 RNA polymerase II transcriptional coactivator KIWI-like isoform X11.2e-3289.66Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSSHHRFLFSLSL
        MSARGKRKDDEDHASEGDAPPKKTFKKDSEE DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG       FSLSL
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSSHHRFLFSLSL

SwissProt top hitse value%identityAlignment
O65154 RNA polymerase II transcriptional coactivator KIWI8.3e-2065.06Show/hide
Query:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MS+RGKRKD++    D  SE  AP KK  K   DS+++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG S
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

O65155 RNA polymerase II transcriptional coactivator KELP1.7e-0429.76Show/hide
Query:  KPKEEEEMSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        + +E E      + +D +    +G+        K+ ++  ++++C +S  RRV ++ ++GK +V IRE+Y KDGK++P  KG S
Subjt:  KPKEEEEMSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

Arabidopsis top hitse value%identityAlignment
AT5G09240.1 ssDNA-binding transcriptional regulator9.4e-1147.06Show/hide
Query:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGSS
        MS  GKRKD++  A      SE  APPKK   K ++E ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P   K+G S
Subjt:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGSS

AT5G09240.2 ssDNA-binding transcriptional regulator9.4e-1147.06Show/hide
Query:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGSS
        MS  GKRKD++  A      SE  APPKK   K ++E ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P   K+G S
Subjt:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGSS

AT5G09240.3 ssDNA-binding transcriptional regulator1.2e-1048.05Show/hide
Query:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP
        MS  GKRKD++  A      SE  APPKK   K ++E ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P
Subjt:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP

AT5G09250.1 ssDNA-binding transcriptional regulator5.9e-2165.06Show/hide
Query:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MS+RGKRKD++    D  SE  AP KK  K   DS+++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG S
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

AT5G09250.2 ssDNA-binding transcriptional regulator7.7e-2164.63Show/hide
Query:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGS
        MS+RGKRKD++    D  SE  AP KK  K   DS+++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG+
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCAACAAAATATTCCCATGAGCATCAGATTCCATTCCAAACACATTCAATTCCCACGCACCAATGTCCCCTAACAGTAAGTGTGGGTTTAATTTCACGTTCTAC
AATATTACGGCACCATTCTCGCGCTCACTTGCAGTTGCAGAGTGTTGAAGAGCAGAGTCGGGAACGGGAAGAACCAAAAAGGATAACGACAACAACAAAGATCAAACCGA
AAGAGGAGGAAGAAATGTCTGCAAGAGGAAAGCGAAAGGACGACGAAGACCACGCATCCGAGGGAGATGCTCCTCCGAAGAAGACGTTTAAGAAAGATTCAGAAGAAGCC
GACGAAATCGTCGTCTGCGAGATTTCCAAGAACCGAAGGGTTATGGTGAGGAACTGGCAAGGAAAAATTGTCGTGGATATTCGGGAGTTTTATGTCAAAGATGGAAAGCA
AATGCCTGGAAAGAAGGGTTCGTCTCATCATCGTTTTCTTTTCTCTCTCTCTCTCGCTTCGTTTTCTTTTCCTCTCGCAGTGGATGAATTGACCTCTCGTTTTGGATTTC
TAGTCTGCGGCTCTTCTAGGGTTTATGTTCCACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCAACAAAATATTCCCATGAGCATCAGATTCCATTCCAAACACATTCAATTCCCACGCACCAATGTCCCCTAACAGTAAGTGTGGGTTTAATTTCACGTTCTAC
AATATTACGGCACCATTCTCGCGCTCACTTGCAGTTGCAGAGTGTTGAAGAGCAGAGTCGGGAACGGGAAGAACCAAAAAGGATAACGACAACAACAAAGATCAAACCGA
AAGAGGAGGAAGAAATGTCTGCAAGAGGAAAGCGAAAGGACGACGAAGACCACGCATCCGAGGGAGATGCTCCTCCGAAGAAGACGTTTAAGAAAGATTCAGAAGAAGCC
GACGAAATCGTCGTCTGCGAGATTTCCAAGAACCGAAGGGTTATGGTGAGGAACTGGCAAGGAAAAATTGTCGTGGATATTCGGGAGTTTTATGTCAAAGATGGAAAGCA
AATGCCTGGAAAGAAGGGTTCGTCTCATCATCGTTTTCTTTTCTCTCTCTCTCTCGCTTCGTTTTCTTTTCCTCTCGCAGTGGATGAATTGACCTCTCGTTTTGGATTTC
TAGTCTGCGGCTCTTCTAGGGTTTATGTTCCACTTTGA
Protein sequenceShow/hide protein sequence
MISTKYSHEHQIPFQTHSIPTHQCPLTVSVGLISRSTILRHHSRAHLQLQSVEEQSREREEPKRITTTTKIKPKEEEEMSARGKRKDDEDHASEGDAPPKKTFKKDSEEA
DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSSHHRFLFSLSLASFSFPLAVDELTSRFGFLVCGSSRVYVPL