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Lag0011356 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011356
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEndo/exonuclease/phosphatase domain-containing protein
Genome locationchr1:22537500..22537966
RNA-Seq ExpressionLag0011356
SyntenyLag0011356
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4361809.1 hypothetical protein G4B88_015937 [Cannabis sativa]9.4e-0533.04Show/hide
Query:  WVLRGDFNEIIESNEKM-------RVWTGMRQICENFGRLLIPVSVFKVFHLAMIS------SDHRSLLAEWKEEPPDLISLNRRRPRR--FVEVWTKYE
        W+  GDFNEI+  +EK+        +W  + ++ E   R L     F  F  A IS      SDHR+L+ +             +R  R  F E W + E
Subjt:  WVLRGDFNEIIESNEKM-------RVWTGMRQICENFGRLLIPVSVFKVFHLAMIS------SDHRSLLAEWKEEPPDLISLNRRRPRR--FVEVWTKYE

Query:  ECREIVMRVWNGAEG
        EC EIV RVW  + G
Subjt:  ECREIVMRVWNGAEG

KAF4386158.1 hypothetical protein F8388_016410 [Cannabis sativa]9.4e-0533.04Show/hide
Query:  WVLRGDFNEIIESNEKM-------RVWTGMRQICENFGRLLIPVSVFKVFHLAMIS------SDHRSLLAEWKEEPPDLISLNRRRPRR--FVEVWTKYE
        W+  GDFNEI+  +EK+        +W  + ++ E   R L     F  F  A IS      SDHR+L+ +             +R  R  F E W + E
Subjt:  WVLRGDFNEIIESNEKM-------RVWTGMRQICENFGRLLIPVSVFKVFHLAMIS------SDHRSLLAEWKEEPPDLISLNRRRPRR--FVEVWTKYE

Query:  ECREIVMRVWNGAEG
        EC EIV RVW  + G
Subjt:  ECREIVMRVWNGAEG

PNY15111.1 ribonuclease H [Trifolium pratense]2.1e-0428.1Show/hide
Query:  MKRLGEQLDISWVLRGDFNEIIESNEKMR-------------------------------VWTGMRQICEN----FGRLLIPV------SVFKVFHLAMI
        + +L  Q+   WV  GD N+++ S EKM                                 W+  RQ  EN      R L+ +      S  +V HL   
Subjt:  MKRLGEQLDISWVLRGDFNEIIESNEKMR-------------------------------VWTGMRQICEN----FGRLLIPV------SVFKVFHLAMI

Query:  SSDHRSLLAEWKEEPPDLISLNRRRPRRFVEVWTKYEECREIVMRVWNGAEGM
         SDH +L+    E    L    R +  RF +VWTK + C + V RVW+ AE M
Subjt:  SSDHRSLLAEWKEEPPDLISLNRRRPRRFVEVWTKYEECREIVMRVWNGAEGM

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]2.8e-0930.14Show/hide
Query:  RLGEQLDISWVLRGDFNEIIESNEKMRVWTGMRQICENF-----------------------------------GRLLIPVSVF------KVFHLAMISS
        RL    D+ W+L GDFNEI+ ++EK+      + + +NF                                    R LI  ++F      ++ HL  ++S
Subjt:  RLGEQLDISWVLRGDFNEIIESNEKMRVWTGMRQICENF-----------------------------------GRLLIPVSVF------KVFHLAMISS

Query:  DHRSLLAEWKEEPPDLISLNR-RRPRRFVEVWTKYEECREIVMRVW
        DHR +LAEW       +   + RRP RF E W  ++EC+EIV RVW
Subjt:  DHRSLLAEWKEEPPDLISLNR-RRPRRFVEVWTKYEECREIVMRVW

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]7.2e-1337.1Show/hide
Query:  MKRLGEQLDISWVLRGDFNEIIESNEKM----RVWTGMR--QICENFGRLLIPVSV------FKVFHLAMISSDHRSLLAEWKEEPPDLISLNRRRPRRF
        ++RL   +D+ W++ GDFNEI+   EKM    R  + MR   I E   R LI  S+       KV HL ++SSDHR +LA W  E P   + +++R  RF
Subjt:  MKRLGEQLDISWVLRGDFNEIIESNEKM----RVWTGMR--QICENFGRLLIPVSV------FKVFHLAMISSDHRSLLAEWKEEPPDLISLNRRRPRRF

Query:  VEVWTKYEECREIVMRVWNGAEGM
         E W + + CR+I+   W    G+
Subjt:  VEVWTKYEECREIVMRVWNGAEGM

TrEMBL top hitse value%identityAlignment
A0A2N9I611 Uncharacterized protein5.4e-0633.85Show/hide
Query:  MKRLGEQLDISWVLRGDFNEIIESNEKMRV-WTGMRQICENF--GRL------LIPVSVFK---VFHLAMISSDHR--SLLAEWKEEPPDLISLNRRRPR
        +K L E   + WV  GDFNEI+  +EK  V W   R + E F  GRL      ++   +FK   + ++ +  SDH   SL+    ++      L +R PR
Subjt:  MKRLGEQLDISWVLRGDFNEIIESNEKMRV-WTGMRQICENF--GRL------LIPVSVFK---VFHLAMISSDHR--SLLAEWKEEPPDLISLNRRRPR

Query:  --RFVEVWTKYEECREIVMRVWNGAEGMRT
          RF + WTK+EEC ++++ VW   E   T
Subjt:  --RFVEVWTKYEECREIVMRVWNGAEGMRT

A0A6J1DRA0 uncharacterized protein LOC1110224231.4e-0930.14Show/hide
Query:  RLGEQLDISWVLRGDFNEIIESNEKMRVWTGMRQICENF-----------------------------------GRLLIPVSVF------KVFHLAMISS
        RL    D+ W+L GDFNEI+ ++EK+      + + +NF                                    R LI  ++F      ++ HL  ++S
Subjt:  RLGEQLDISWVLRGDFNEIIESNEKMRVWTGMRQICENF-----------------------------------GRLLIPVSVF------KVFHLAMISS

Query:  DHRSLLAEWKEEPPDLISLNR-RRPRRFVEVWTKYEECREIVMRVW
        DHR +LAEW       +   + RRP RF E W  ++EC+EIV RVW
Subjt:  DHRSLLAEWKEEPPDLISLNR-RRPRRFVEVWTKYEECREIVMRVW

A0A6J1DUG8 uncharacterized protein LOC1110241353.5e-1337.1Show/hide
Query:  MKRLGEQLDISWVLRGDFNEIIESNEKM----RVWTGMR--QICENFGRLLIPVSV------FKVFHLAMISSDHRSLLAEWKEEPPDLISLNRRRPRRF
        ++RL   +D+ W++ GDFNEI+   EKM    R  + MR   I E   R LI  S+       KV HL ++SSDHR +LA W  E P   + +++R  RF
Subjt:  MKRLGEQLDISWVLRGDFNEIIESNEKM----RVWTGMR--QICENFGRLLIPVSV------FKVFHLAMISSDHRSLLAEWKEEPPDLISLNRRRPRRF

Query:  VEVWTKYEECREIVMRVWNGAEGM
         E W + + CR+I+   W    G+
Subjt:  VEVWTKYEECREIVMRVWNGAEGM

A0A7J6EVU4 Uncharacterized protein4.6e-0533.04Show/hide
Query:  WVLRGDFNEIIESNEKM-------RVWTGMRQICENFGRLLIPVSVFKVFHLAMIS------SDHRSLLAEWKEEPPDLISLNRRRPRR--FVEVWTKYE
        W+  GDFNEI+  +EK+        +W  + ++ E   R L     F  F  A IS      SDHR+L+ +             +R  R  F E W + E
Subjt:  WVLRGDFNEIIESNEKM-------RVWTGMRQICENFGRLLIPVSVFKVFHLAMIS------SDHRSLLAEWKEEPPDLISLNRRRPRR--FVEVWTKYE

Query:  ECREIVMRVWNGAEG
        EC EIV RVW  + G
Subjt:  ECREIVMRVWNGAEG

A0A803Q6L7 Uncharacterized protein1.1e-0631.3Show/hide
Query:  MKRLGEQLDISWVLRGDFNEIIESNEKMRVWTGMRQICENFGRLL-------IPVSVFKVFHLAMISSDHRSLLAEWKEEPPDLISLNRRRPR-RFVEVW
        + R+G      WV+ GDFNEI+   EKM        +  NF + L       +     KVFHL  ++SDH  LL +   +  + ++ +R   R  F   W
Subjt:  MKRLGEQLDISWVLRGDFNEIIESNEKMRVWTGMRQICENFGRLL-------IPVSVFKVFHLAMISSDHRSLLAEWKEEPPDLISLNRRRPR-RFVEVW

Query:  TKYEECREIVMRVWN
         + E+C +IV   WN
Subjt:  TKYEECREIVMRVWN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCGGCTGGGTGAGCAGCTAGACATATCGTGGGTCCTTAGAGGTGACTTCAATGAAATCATTGAAAGCAATGAAAAAATGAGGGTTTGGACAGGTATGAGACAGAT
ATGCGAGAATTTCGGGAGGCTATTGATTCCTGTGAGTGTCTTTAAAGTGTTTCATCTAGCCATGATTTCGTCTGATCATAGATCGCTTCTGGCAGAATGGAAGGAAGAAC
CTCCAGATCTAATAAGCCTGAATCGTAGGCGTCCCAGACGGTTTGTGGAGGTTTGGACAAAGTATGAAGAATGTAGGGAGATTGTAATGCGAGTTTGGAATGGAGCTGAA
GGGATGAGAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCGGCTGGGTGAGCAGCTAGACATATCGTGGGTCCTTAGAGGTGACTTCAATGAAATCATTGAAAGCAATGAAAAAATGAGGGTTTGGACAGGTATGAGACAGAT
ATGCGAGAATTTCGGGAGGCTATTGATTCCTGTGAGTGTCTTTAAAGTGTTTCATCTAGCCATGATTTCGTCTGATCATAGATCGCTTCTGGCAGAATGGAAGGAAGAAC
CTCCAGATCTAATAAGCCTGAATCGTAGGCGTCCCAGACGGTTTGTGGAGGTTTGGACAAAGTATGAAGAATGTAGGGAGATTGTAATGCGAGTTTGGAATGGAGCTGAA
GGGATGAGAACTTGA
Protein sequenceShow/hide protein sequence
MKRLGEQLDISWVLRGDFNEIIESNEKMRVWTGMRQICENFGRLLIPVSVFKVFHLAMISSDHRSLLAEWKEEPPDLISLNRRRPRRFVEVWTKYEECREIVMRVWNGAE
GMRT