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Lag0011357 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011357
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:22537994..22539017
RNA-Seq ExpressionLag0011357
SyntenyLag0011357
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018813430.1 uncharacterized protein LOC108985542 [Juglans regia]1.1e-0529.09Show/hide
Query:  NLDQWSRRKYNGSIRGAILRKEKEIQWL--LDQGDHHNASEMIIKEKELENLLENDEIYWKQRAQEDCGTKFEAHDNFY--------------------Q
        +L +WSR++ N ++RG+I+ K  +I  L  L+ G+H        K+ E++ LLE + I WKQR ++      +    FY                     
Subjt:  NLDQWSRRKYNGSIRGAILRKEKEIQWL--LDQGDHHNASEMIIKEKELENLLENDEIYWKQRAQEDCGTKFEAHDNFY--------------------Q

Query:  GWDLWSSKEYAS--YK-APGPD----EIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL
        G+   SS++ +   YK   G D     +  LN +G +   N+ ++ LIPK++ P  + DF PISL
Subjt:  GWDLWSSKEYAS--YK-APGPD----EIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]2.4e-0528.12Show/hide
Query:  MQNLDQWSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMIIKEKELENLLENDEIYWKQR-AQEDCGTKF--------EAHDNFYQGWDLWSSKEYA
        ++ L +W+  +  GS+RGAI+RKE EIQ ++  G       +   +++LE LLE +E YW+Q  + +D G           E H N      +       
Subjt:  MQNLDQWSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMIIKEKELENLLENDEIYWKQR-AQEDCGTKF--------EAHDNFYQGWDLWSSKEYA

Query:  SYKAPGPDEIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL------FCFHQNTNTLAKIQNTILNLLVSVATGLRRGATDFVPKR
         ++ P P +        ++   NK ++ LI K +D   MKDF  ISL        +   +  LA     +LN L+S         + FVP R
Subjt:  SYKAPGPDEIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL------FCFHQNTNTLAKIQNTILNLLVSVATGLRRGATDFVPKR

XP_022762159.1 uncharacterized protein LOC111308084 [Durio zibethinus]6.3e-0631.94Show/hide
Query:  WSRRKYNGSIRGAILRKEKEIQWLLDQGDH-HNASEMIIKEKELENLLENDEIYWKQRA------QEDCGTKFEAH------DNF----YQGWDLWS-SK
        WS+ K+NG  +      +  I+   + GD   N+ E  IK++ L  LLE +E +W QR+      + D  T F  H      +NF    +   D++   K
Subjt:  WSRRKYNGSIRGAILRKEKEIQWLLDQGDH-HNASEMIIKEKELENLLENDEIYWKQRA------QEDCGTKFEAH------DNF----YQGWDLWS-SK

Query:  EYASYKAPGPDEIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL--FCFHQNTNTLAKIQNTILNLLVSVATGLRRGATDFVPKR
        +    KAP  D        G L   N   + LIPKV+DP +M  FRPIS+    +     TLAK    IL  LVS         + FVP+R
Subjt:  EYASYKAPGPDEIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL--FCFHQNTNTLAKIQNTILNLLVSVATGLRRGATDFVPKR

XP_030479107.1 uncharacterized protein LOC115696342 [Cannabis sativa]2.2e-0627.75Show/hide
Query:  MQNLDQWSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMII----KEKELENLLENDEIYWKQRAQEDCGTKFEA------------HDNFYQGWDL
        + NL  WS+ +Y   ++  I R + ++  +L+  DH  +S+ +      + EL+ LL  DE+YWKQRA+  C     +               F  G   
Subjt:  MQNLDQWSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMII----KEKELENLLENDEIYWKQRAQEDCGTKFEA------------HDNFYQGWDL

Query:  WSSKEYASY-----KAPGPD---------------------EIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISLFCFHQNTNTLAK-----IQN
            ++A +     KAPGPD                      +  LN +G+++  N+  + LIPK ++P  + DFRPISL       NTL K     + N
Subjt:  WSSKEYASY-----KAPGPD---------------------EIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISLFCFHQNTNTLAK-----IQN

Query:  TILNLLVSV
         I N+L S+
Subjt:  TILNLLVSV

XP_042969109.1 uncharacterized protein LOC122301799 [Carya illinoinensis]7.0e-0523.96Show/hide
Query:  MQNLDQWSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMIIKEKELENLLENDEIYWKQRAQEDCGTKFEAHDNFYQGWDLWSSKEYASYKAPGPDE
        M  L  W++R   G+ R  +  K   IQ L  Q       ++   ++E+E ++E++E+ W+QRA++  G          + + L+    ++S    G +E
Subjt:  MQNLDQWSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMIIKEKELENLLENDEIYWKQRAQEDCGTKFEAHDNFYQGWDLWSSKEYASYKAPGPDE

Query:  I-------------QFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISLFCFHQNTNTLAKIQNTIL--NLLVSVATGLRRGATDFVPKR
                      + L     +   N+ Y+ALIPK + P  + ++RPISL       N + K+ + +L   L + + + +    + FVP R
Subjt:  I-------------QFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISLFCFHQNTNTLAKIQNTIL--NLLVSVATGLRRGATDFVPKR

TrEMBL top hitse value%identityAlignment
A0A2I4E209 uncharacterized protein LOC1089855425.2e-0629.09Show/hide
Query:  NLDQWSRRKYNGSIRGAILRKEKEIQWL--LDQGDHHNASEMIIKEKELENLLENDEIYWKQRAQEDCGTKFEAHDNFY--------------------Q
        +L +WSR++ N ++RG+I+ K  +I  L  L+ G+H        K+ E++ LLE + I WKQR ++      +    FY                     
Subjt:  NLDQWSRRKYNGSIRGAILRKEKEIQWL--LDQGDHHNASEMIIKEKELENLLENDEIYWKQRAQEDCGTKFEAHDNFY--------------------Q

Query:  GWDLWSSKEYAS--YK-APGPD----EIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL
        G+   SS++ +   YK   G D     +  LN +G +   N+ ++ LIPK++ P  + DF PISL
Subjt:  GWDLWSSKEYAS--YK-APGPD----EIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL

A0A2Z6NCL7 Reverse transcriptase domain-containing protein5.7e-0527.05Show/hide
Query:  WSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMII-KEKELENLLENDEIYWKQRAQE------DCGTKF---------------------------
        W+ R+  G+I   I   + E+  L    + H   + II KEKEL++LLE +E+ W Q+A+       D  TKF                           
Subjt:  WSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMII-KEKELENLLENDEIYWKQRAQE------DCGTKF---------------------------

Query:  --EAHDNFYQGW-DLWSS--------------KEYASYKAPGPD---------------------EIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFR
          +  + F Q +  L++S              KE  S  APGPD                      +  LN  G+  + N  ++ LIPK  +P T  DFR
Subjt:  --EAHDNFYQGW-DLWSS--------------KEYASYKAPGPD---------------------EIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFR

Query:  PISLFCFHQNTNTLAKIQNTILN-LLVSVATGLRRGATDFVPKR
        PIS FC      TL  I  T+ N L + +   + +  + FVP+R
Subjt:  PISLFCFHQNTNTLAKIQNTILN-LLVSVATGLRRGATDFVPKR

A0A6J1DRA0 uncharacterized protein LOC1110224231.2e-0528.12Show/hide
Query:  MQNLDQWSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMIIKEKELENLLENDEIYWKQR-AQEDCGTKF--------EAHDNFYQGWDLWSSKEYA
        ++ L +W+  +  GS+RGAI+RKE EIQ ++  G       +   +++LE LLE +E YW+Q  + +D G           E H N      +       
Subjt:  MQNLDQWSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMIIKEKELENLLENDEIYWKQR-AQEDCGTKF--------EAHDNFYQGWDLWSSKEYA

Query:  SYKAPGPDEIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL------FCFHQNTNTLAKIQNTILNLLVSVATGLRRGATDFVPKR
         ++ P P +        ++   NK ++ LI K +D   MKDF  ISL        +   +  LA     +LN L+S         + FVP R
Subjt:  SYKAPGPDEIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL------FCFHQNTNTLAKIQNTILNLLVSVATGLRRGATDFVPKR

A0A6P6AB77 uncharacterized protein LOC1113080843.0e-0631.94Show/hide
Query:  WSRRKYNGSIRGAILRKEKEIQWLLDQGDH-HNASEMIIKEKELENLLENDEIYWKQRA------QEDCGTKFEAH------DNF----YQGWDLWS-SK
        WS+ K+NG  +      +  I+   + GD   N+ E  IK++ L  LLE +E +W QR+      + D  T F  H      +NF    +   D++   K
Subjt:  WSRRKYNGSIRGAILRKEKEIQWLLDQGDH-HNASEMIIKEKELENLLENDEIYWKQRA------QEDCGTKFEAH------DNF----YQGWDLWS-SK

Query:  EYASYKAPGPDEIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL--FCFHQNTNTLAKIQNTILNLLVSVATGLRRGATDFVPKR
        +    KAP  D        G L   N   + LIPKV+DP +M  FRPIS+    +     TLAK    IL  LVS         + FVP+R
Subjt:  EYASYKAPGPDEIQFLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISL--FCFHQNTNTLAKIQNTILNLLVSVATGLRRGATDFVPKR

A0A803PR88 Uncharacterized protein6.8e-0630.77Show/hide
Query:  QNLDQWSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMIIKEKELENLLENDEIYWKQRA--------QEDCGTKFEAHDNFYQGWDLWSSKEY-AS
        Q+L +W  + Y G+ +  I + +KE++    + D  + ++    EKEL  +    E+YW+QR+        +E     F+ H +   G D  +   Y   
Subjt:  QNLDQWSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMIIKEKELENLLENDEIYWKQRA--------QEDCGTKFEAHDNFYQGWDLWSSKEY-AS

Query:  YKAPGPDEIQ-----FLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISLFCFHQNTNTLAKIQNTIL
        +   G D I+     F NGE      N  +M LIPKV++P TM D RPISL       N L KI + +L
Subjt:  YKAPGPDEIQ-----FLNGEGNLTSTNKNYMALIPKVRDPNTMKDFRPISLFCFHQNTNTLAKIQNTIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAATCTAGATCAATGGAGCAGAAGGAAGTACAACGGATCCATCAGGGGGGCTATATTGAGGAAGGAAAAGGAAATCCAGTGGCTCCTTGATCAAGGGGATCATCA
TAACGCTTCTGAGATGATTATAAAGGAAAAAGAGCTTGAGAACCTTCTAGAAAATGATGAGATATACTGGAAACAGCGTGCTCAGGAGGACTGCGGAACAAAATTTGAAG
CTCACGACAACTTTTACCAGGGATGGGATTTATGGAGTAGTAAAGAATATGCATCCTACAAAGCCCCTGGGCCAGATGAGATTCAATTTCTGAACGGGGAGGGGAACCTG
ACTAGTACAAACAAGAACTATATGGCGCTAATTCCGAAGGTTAGGGACCCTAATACTATGAAGGATTTTCGACCTATAAGTTTATTTTGTTTCCACCAAAATACCAATAC
ATTGGCAAAGATTCAGAATACAATTCTTAATCTATTAGTAAGTGTCGCTACGGGTTTGCGACGCGGAGCGACCGACTTTGTTCCCAAGAGGAGGAAAATGGAGTCGCCAC
CAGTCTTGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAATCTAGATCAATGGAGCAGAAGGAAGTACAACGGATCCATCAGGGGGGCTATATTGAGGAAGGAAAAGGAAATCCAGTGGCTCCTTGATCAAGGGGATCATCA
TAACGCTTCTGAGATGATTATAAAGGAAAAAGAGCTTGAGAACCTTCTAGAAAATGATGAGATATACTGGAAACAGCGTGCTCAGGAGGACTGCGGAACAAAATTTGAAG
CTCACGACAACTTTTACCAGGGATGGGATTTATGGAGTAGTAAAGAATATGCATCCTACAAAGCCCCTGGGCCAGATGAGATTCAATTTCTGAACGGGGAGGGGAACCTG
ACTAGTACAAACAAGAACTATATGGCGCTAATTCCGAAGGTTAGGGACCCTAATACTATGAAGGATTTTCGACCTATAAGTTTATTTTGTTTCCACCAAAATACCAATAC
ATTGGCAAAGATTCAGAATACAATTCTTAATCTATTAGTAAGTGTCGCTACGGGTTTGCGACGCGGAGCGACCGACTTTGTTCCCAAGAGGAGGAAAATGGAGTCGCCAC
CAGTCTTGATTTAG
Protein sequenceShow/hide protein sequence
MQNLDQWSRRKYNGSIRGAILRKEKEIQWLLDQGDHHNASEMIIKEKELENLLENDEIYWKQRAQEDCGTKFEAHDNFYQGWDLWSSKEYASYKAPGPDEIQFLNGEGNL
TSTNKNYMALIPKVRDPNTMKDFRPISLFCFHQNTNTLAKIQNTILNLLVSVATGLRRGATDFVPKRRKMESPPVLI