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Lag0011358 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011358
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:22627814..22628179
RNA-Seq ExpressionLag0011358
SyntenyLag0011358
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]1.6e-1541.18Show/hide
Query:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH
        GDFNEIL   E++G  D  +S    F  AL++ +L D G+ G  FTW+N+  G A V++RLDR   N + + LF S+ V + +F+ SDHRP+   L++  
Subjt:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH

Query:  SPCRNRY-RKRSFQFEEAW
          C  +Y +K+SF+FE  W
Subjt:  SPCRNRY-RKRSFQFEEAW

KAF4372682.1 hypothetical protein F8388_000849, partial [Cannabis sativa]9.7e-1641.18Show/hide
Query:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH
        GDFNE+L   E++G  D  +S    F  AL++ +L D G+ G  FTW+N+  G A V++RLDR   N D + LF S+ V + +F+ SDHRP+   L++  
Subjt:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH

Query:  SPCRNRY-RKRSFQFEEAW
          C  +Y +K+SF+FE  W
Subjt:  SPCRNRY-RKRSFQFEEAW

KAF4381998.1 hypothetical protein G4B88_006630 [Cannabis sativa]1.1e-1442.86Show/hide
Query:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH
        GDFNEIL   E++G  D  +S    F NAL+   L D G+ G  FTW+N+  G A V++RLDR   N   + LF  + V + +FL SDHRP+   L++  
Subjt:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH

Query:  SPCRNRY-RKRSFQFEEAW
           R RY +KR F+FE  W
Subjt:  SPCRNRY-RKRSFQFEEAW

KAG8375096.1 hypothetical protein BUALT_Bualt10G0064800 [Buddleja alternifolia]3.7e-1541.32Show/hide
Query:  MAGDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQD
        + GDFN I+ + E++G R    S S  F N LN   L D G+ GNPFTW NR  G A ++ RLDR + N D  LL+   +V+HL  + SDH PL +    
Subjt:  MAGDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQD

Query:  YHSPCRNRYRKRSFQFEEAWT
         H+    R +   F+FE+ WT
Subjt:  YHSPCRNRYRKRSFQFEEAWT

XP_042952162.1 uncharacterized protein LOC122289251 [Carya illinoinensis]2.8e-1540.5Show/hide
Query:  MAGDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQD
        +AGDFNEI+++ E+ G      S  R F  A+ E+EL D GY+G  +TW N      FV++RLDRC+ N     L+  ++V  L   CSDH+P+ + L  
Subjt:  MAGDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQD

Query:  YHSPCRNRYRKRSFQFEEAWT
              N  RKR F+FE  WT
Subjt:  YHSPCRNRYRKRSFQFEEAWT

TrEMBL top hitse value%identityAlignment
A0A2N9I946 Uncharacterized protein2.1e-1643.22Show/hide
Query:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH
        GDFNE+L  +E+ G  D  +S    F  AL++  L+D GYNG  F+W NR    A VR RLDRC+ N++  LLF S  V+H+ F  SDH  L + L    
Subjt:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH

Query:  SPCRNRYRKRSFQFEEAW
         P     RK+ F+FE  W
Subjt:  SPCRNRYRKRSFQFEEAW

A0A2N9IPY7 Reverse transcriptase domain-containing protein1.0e-1538.98Show/hide
Query:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH
        GDFNEI+   E+ G R+      +GF N ++E    D G+ G PFTW N   G+A    RLDR M  ++  L FH+ +V+HL+ + SDH+P+ + L   H
Subjt:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH

Query:  SPCRNRYRKRSFQFEEAW
             R  +R F+FE  W
Subjt:  SPCRNRYRKRSFQFEEAW

A0A7J6DZ24 CCHC-type domain-containing protein8.0e-1641.18Show/hide
Query:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH
        GDFNEIL   E++G  D  +S    F  AL++ +L D G+ G  FTW+N+  G A V++RLDR   N + + LF S+ V + +F+ SDHRP+   L++  
Subjt:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH

Query:  SPCRNRY-RKRSFQFEEAW
          C  +Y +K+SF+FE  W
Subjt:  SPCRNRY-RKRSFQFEEAW

A0A7J6FPV7 CCHC-type domain-containing protein4.7e-1641.18Show/hide
Query:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH
        GDFNE+L   E++G  D  +S    F  AL++ +L D G+ G  FTW+N+  G A V++RLDR   N D + LF S+ V + +F+ SDHRP+   L++  
Subjt:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH

Query:  SPCRNRY-RKRSFQFEEAW
          C  +Y +K+SF+FE  W
Subjt:  SPCRNRY-RKRSFQFEEAW

A0A7J6GL46 CCHC-type domain-containing protein5.2e-1542.86Show/hide
Query:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH
        GDFNEIL   E++G  D  +S    F NAL+   L D G+ G  FTW+N+  G A V++RLDR   N   + LF  + V + +FL SDHRP+   L++  
Subjt:  GDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYH

Query:  SPCRNRY-RKRSFQFEEAW
           R RY +KR F+FE  W
Subjt:  SPCRNRY-RKRSFQFEEAW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGAGACTTCAATGAAATCTTACATGAGAAAGAAAGAGAAGGCAGTCGTGATTCAGTCATATCTCTCAGTAGGGGTTTTTCGAATGCTCTTAATGAGAGTGAATT
ACGGGATGCAGGATATAATGGGAATCCTTTCACTTGGATGAATAGATGTTATGGAGCTGCTTTTGTTAGAAAGCGTTTGGATCGCTGCATGGTGAATTCTGACCTTTACT
TACTTTTCCACTCTATTGTTGTTAATCATCTTGAATTTTTATGCTCTGATCATAGACCTCTTGAAATTTGTTTGCAGGACTACCATTCTCCTTGCCGTAATAGATACCGC
AAACGCTCCTTTCAATTTGAGGAGGCATGGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGAGACTTCAATGAAATCTTACATGAGAAAGAAAGAGAAGGCAGTCGTGATTCAGTCATATCTCTCAGTAGGGGTTTTTCGAATGCTCTTAATGAGAGTGAATT
ACGGGATGCAGGATATAATGGGAATCCTTTCACTTGGATGAATAGATGTTATGGAGCTGCTTTTGTTAGAAAGCGTTTGGATCGCTGCATGGTGAATTCTGACCTTTACT
TACTTTTCCACTCTATTGTTGTTAATCATCTTGAATTTTTATGCTCTGATCATAGACCTCTTGAAATTTGTTTGCAGGACTACCATTCTCCTTGCCGTAATAGATACCGC
AAACGCTCCTTTCAATTTGAGGAGGCATGGACTTGA
Protein sequenceShow/hide protein sequence
MAGDFNEILHEKEREGSRDSVISLSRGFSNALNESELRDAGYNGNPFTWMNRCYGAAFVRKRLDRCMVNSDLYLLFHSIVVNHLEFLCSDHRPLEICLQDYHSPCRNRYR
KRSFQFEEAWT