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Lag0011368 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011368
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationchr1:22944370..22945095
RNA-Seq ExpressionLag0011368
SyntenyLag0011368
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]1.2e-1433.77Show/hide
Query:  SDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQRVKIVPGKDNIQNNIQRKDKASTS
        +DLK +     +F+++ L+PT+HD T+S +R+ +LYC++ G ++NVG +I  EI     +  GKLFF  LIT+ C+   +    D  ++ + RK   S  
Subjt:  SDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQRVKIVPGKDNIQNNIQRKDKASTS

Query:  QATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENLKTYWTYAKKRD
           P   P   +PS  T  T   P  E L        Q+ E L+T+W Y ++RD
Subjt:  QATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENLKTYWTYAKKRD

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.6e-1729.15Show/hide
Query:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQ-
        ++ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S DR++LL+ ++ G  +NVG +I  EI +   ++ G LFF SLIT+LC+ 
Subjt:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQ-

Query:  -RVKIVPGKDNIQNNIQRKDKASTSQATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENL---------------------KTYWTYAKKRD
         R   +  ++ + N  +    A    A      +   PS   P T  S  +   G + +QL  + + L                     + +W Y+K+RD
Subjt:  -RVKIVPGKDNIQNNIQRKDKASTSQATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENL---------------------KTYWTYAKKRD

Query:  EAIREFYLSIAPSITPVFPDFPRSLLP--REEGDSDEEEDEENEEKE
         A+++   +      P FP FP+ +L     E +++ ++D  NE  E
Subjt:  EAIREFYLSIAPSITPVFPDFPRSLLP--REEGDSDEEEDEENEEKE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]5.1e-1630.91Show/hide
Query:  LKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQ--RVKIVPGKDNIQ----------NN
        L P + VW HF+K+RL+PTTH  T+S DR++LLY ++ G  +NVG +I  EI +   +++G LFF SLITQLC+  R   +  ++ +             
Subjt:  LKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQ--RVKIVPGKDNIQ----------NN

Query:  IQRKDKASTSQATPQSGPNVASPS-------QHTPFTRPSPTSEALGMVHRQ--LDQIRENLKTYWTYAKKRDEAIREFYLSIAPSITPVFPDFPRSLLP
        I ++ +   +Q    S P VAS S       Q         + + +   H    L    +  + +W Y+K+RD A+++   +      P FP FP+ LL 
Subjt:  IQRKDKASTSQATPQSGPNVASPS-------QHTPFTRPSPTSEALGMVHRQ--LDQIRENLKTYWTYAKKRDEAIREFYLSIAPSITPVFPDFPRSLLP

Query:  --REEGDSDEEEDEENEEKE
            E +++ ++D  NE  E
Subjt:  --REEGDSDEEEDEENEEKE

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.5e-1536.24Show/hide
Query:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLC--
        ++ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S +RV+LLY ++ G  +NVG II  EI +Y  +++G LFF SLIT++C  
Subjt:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLC--

Query:  QRVKIVPGKDNIQN----------NIQRKDKASTSQATPQSGPNVASPS
         R   +  ++ + N           I ++  A  S     S P  AS S
Subjt:  QRVKIVPGKDNIQN----------NIQRKDKASTSQATPQSGPNVASPS

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]4.4e-2030.34Show/hide
Query:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQR
        ++ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH   +S DR++LL+ ++NG  +NVG +I  EI +   ++ G LFF SLIT+LC+ 
Subjt:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQR

Query:  VKIVPGKDNIQNNIQRKDKASTSQATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENL----------KTYWTYAKKRDEAIREFYLSIAPS
           +  ++ + +N    D  + ++ T Q GP  ++    +     + +S   G V +QL  + + L          + +W Y+K+RD A+++   +    
Subjt:  VKIVPGKDNIQNNIQRKDKASTSQATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENL----------KTYWTYAKKRDEAIREFYLSIAPS

Query:  ITPVFPDFPRSLLP--REEGDSDEEEDEENEEKE
          P FP FP+ +L     E +++ ++D  NE  E
Subjt:  ITPVFPDFPRSLLP--REEGDSDEEEDEENEEKE

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)2.2e-1729.15Show/hide
Query:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQ-
        ++ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S DR++LL+ ++ G  +NVG +I  EI +   ++ G LFF SLIT+LC+ 
Subjt:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQ-

Query:  -RVKIVPGKDNIQNNIQRKDKASTSQATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENL---------------------KTYWTYAKKRD
         R   +  ++ + N  +    A    A      +   PS   P T  S  +   G + +QL  + + L                     + +W Y+K+RD
Subjt:  -RVKIVPGKDNIQNNIQRKDKASTSQATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENL---------------------KTYWTYAKKRD

Query:  EAIREFYLSIAPSITPVFPDFPRSLLP--REEGDSDEEEDEENEEKE
         A+++   +      P FP FP+ +L     E +++ ++D  NE  E
Subjt:  EAIREFYLSIAPSITPVFPDFPRSLLP--REEGDSDEEEDEENEEKE

A0A2P5CEY2 Uncharacterized protein2.5e-1630.91Show/hide
Query:  LKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQ--RVKIVPGKDNIQ----------NN
        L P + VW HF+K+RL+PTTH  T+S DR++LLY ++ G  +NVG +I  EI +   +++G LFF SLITQLC+  R   +  ++ +             
Subjt:  LKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQ--RVKIVPGKDNIQ----------NN

Query:  IQRKDKASTSQATPQSGPNVASPS-------QHTPFTRPSPTSEALGMVHRQ--LDQIRENLKTYWTYAKKRDEAIREFYLSIAPSITPVFPDFPRSLLP
        I ++ +   +Q    S P VAS S       Q         + + +   H    L    +  + +W Y+K+RD A+++   +      P FP FP+ LL 
Subjt:  IQRKDKASTSQATPQSGPNVASPS-------QHTPFTRPSPTSEALGMVHRQ--LDQIRENLKTYWTYAKKRDEAIREFYLSIAPSITPVFPDFPRSLLP

Query:  --REEGDSDEEEDEENEEKE
            E +++ ++D  NE  E
Subjt:  --REEGDSDEEEDEENEEKE

A0A2P5CPE8 Uncharacterized protein1.2e-1536.24Show/hide
Query:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLC--
        ++ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S +RV+LLY ++ G  +NVG II  EI +Y  +++G LFF SLIT++C  
Subjt:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLC--

Query:  QRVKIVPGKDNIQN----------NIQRKDKASTSQATPQSGPNVASPS
         R   +  ++ + N           I ++  A  S     S P  AS S
Subjt:  QRVKIVPGKDNIQN----------NIQRKDKASTSQATPQSGPNVASPS

A0A2P5DXM3 Uncharacterized protein2.1e-2030.34Show/hide
Query:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQR
        ++ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH   +S DR++LL+ ++NG  +NVG +I  EI +   ++ G LFF SLIT+LC+ 
Subjt:  MKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQR

Query:  VKIVPGKDNIQNNIQRKDKASTSQATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENL----------KTYWTYAKKRDEAIREFYLSIAPS
           +  ++ + +N    D  + ++ T Q GP  ++    +     + +S   G V +QL  + + L          + +W Y+K+RD A+++   +    
Subjt:  VKIVPGKDNIQNNIQRKDKASTSQATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENL----------KTYWTYAKKRDEAIREFYLSIAPS

Query:  ITPVFPDFPRSLLP--REEGDSDEEEDEENEEKE
          P FP FP+ +L     E +++ ++D  NE  E
Subjt:  ITPVFPDFPRSLLP--REEGDSDEEEDEENEEKE

A0A7J6FZ22 Uncharacterized protein6.0e-1533.77Show/hide
Query:  SDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQRVKIVPGKDNIQNNIQRKDKASTS
        +DLK +     +F+++ L+PT+HD T+S +R+ +LYC++ G ++NVG +I  EI     +  GKLFF  LIT+ C+   +    D  ++ + RK   S  
Subjt:  SDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQRVKIVPGKDNIQNNIQRKDKASTS

Query:  QATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENLKTYWTYAKKRD
           P   P   +PS  T  T   P  E L        Q+ E L+T+W Y ++RD
Subjt:  QATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENLKTYWTYAKKRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAACAATGAAACTTGTGGCCAACAAGGGGGTCCAATGGAAAGAATCGCAGACGAAAGTGAAGTCTCTAGTGCCAAGCGACCTAAAGCCGGAATCGGCAGTGTG
GCTTCACTTCATCAAGAACCGCTTGATGCCAACCACCCATGACATCACGATTTCAGTGGATAGAGTGATGCTACTATATTGCCTTATGAATGGGTTGGAGATGAACGTGG
GGAGCATTATTAGGGATGAGATCTTATCCTATGGACGGAAAAGGGCAGGGAAGCTTTTCTTCGGCTCACTCATCACCCAACTCTGTCAGAGGGTGAAGATTGTGCCAGGC
AAGGACAACATCCAGAACAACATCCAGAGGAAGGATAAAGCCTCCACATCACAGGCCACTCCTCAATCAGGGCCGAATGTAGCCTCTCCATCCCAACACACTCCTTTTAC
AAGGCCTTCACCAACATCGGAAGCCCTAGGTATGGTCCACCGCCAGTTAGATCAAATCAGGGAGAACCTGAAGACTTATTGGACATATGCAAAGAAGCGAGATGAAGCTA
TTAGAGAGTTCTATCTCTCGATTGCCCCAAGCATTACTCCAGTCTTTCCTGATTTCCCTCGATCATTGCTGCCCCGAGAAGAAGGGGATTCTGATGAAGAGGAAGATGAA
GAGAATGAAGAGAAAGAGAGTTCCTCAGATGAGGAATATGGGAATTTTCTGATCCCCTTTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAACAATGAAACTTGTGGCCAACAAGGGGGTCCAATGGAAAGAATCGCAGACGAAAGTGAAGTCTCTAGTGCCAAGCGACCTAAAGCCGGAATCGGCAGTGTG
GCTTCACTTCATCAAGAACCGCTTGATGCCAACCACCCATGACATCACGATTTCAGTGGATAGAGTGATGCTACTATATTGCCTTATGAATGGGTTGGAGATGAACGTGG
GGAGCATTATTAGGGATGAGATCTTATCCTATGGACGGAAAAGGGCAGGGAAGCTTTTCTTCGGCTCACTCATCACCCAACTCTGTCAGAGGGTGAAGATTGTGCCAGGC
AAGGACAACATCCAGAACAACATCCAGAGGAAGGATAAAGCCTCCACATCACAGGCCACTCCTCAATCAGGGCCGAATGTAGCCTCTCCATCCCAACACACTCCTTTTAC
AAGGCCTTCACCAACATCGGAAGCCCTAGGTATGGTCCACCGCCAGTTAGATCAAATCAGGGAGAACCTGAAGACTTATTGGACATATGCAAAGAAGCGAGATGAAGCTA
TTAGAGAGTTCTATCTCTCGATTGCCCCAAGCATTACTCCAGTCTTTCCTGATTTCCCTCGATCATTGCTGCCCCGAGAAGAAGGGGATTCTGATGAAGAGGAAGATGAA
GAGAATGAAGAGAAAGAGAGTTCCTCAGATGAGGAATATGGGAATTTTCTGATCCCCTTTGACTAA
Protein sequenceShow/hide protein sequence
MKETMKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDITISVDRVMLLYCLMNGLEMNVGSIIRDEILSYGRKRAGKLFFGSLITQLCQRVKIVPG
KDNIQNNIQRKDKASTSQATPQSGPNVASPSQHTPFTRPSPTSEALGMVHRQLDQIRENLKTYWTYAKKRDEAIREFYLSIAPSITPVFPDFPRSLLPREEGDSDEEEDE
ENEEKESSSDEEYGNFLIPFD