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Lag0011375 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011375
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:23126981..23127827
RNA-Seq ExpressionLag0011375
SyntenyLag0011375
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006485824.1 uncharacterized protein LOC102613298 [Citrus sinensis]1.0e-2130.34Show/hide
Query:  MTKKSEEDAILHQFAEMKVTAE------------EKASVFHQ-QEEAIDVTEKKLEHTIIDYRGFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPK
        +T +SEED ++     MKV  E            +  SV  +    A+    +  + T ++  G N+FL KF +   K  I+  GPW +DR+++++ +P 
Subjt:  MTKKSEEDAILHQFAEMKVTAE------------EKASVFHQ-QEEAIDVTEKKLEHTIIDYRGFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPK

Query:  GDCSGDEMEFRSA------------------AMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQVDITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCY
        G     + +F  A                    EI   +GKV++V+ +D + E  GS +R++I V++T PL + + LK +  G +  + + YEKLPDFC+
Subjt:  GDCSGDEMEFRSA------------------AMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQVDITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCY

Query:  GCGGLGHIIKECEEDTGSDTEDIPYGRWMREPTK
         CG +GH  +EC +  G   +D+ YG WMR  T+
Subjt:  GCGGLGHIIKECEEDTGSDTEDIPYGRWMREPTK

XP_024033132.1 uncharacterized protein LOC112095437 [Citrus clementina]1.0e-2132.07Show/hide
Query:  AIDVTEKKLEHTIIDYRGFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEF------------------RSAAMEIRSLVGKVEQVD
        A+D   + +    ++  G N+F+ KF +   K  +   GPW +DR +++L +PKG  S  +  F                   S   E+ S VGKVE + 
Subjt:  AIDVTEKKLEHTIIDYRGFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEF------------------RSAAMEIRSLVGKVEQVD

Query:  LEDVSDENWGSSLRIKIQVDITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGSDTEDIPYGRWMR
        + D   E +G  +RI++ V+IT PLK+ + LK      +  + + YE+LPDFC+ CG +GH  +EC E  G   E++P+G W++
Subjt:  LEDVSDENWGSSLRIKIQVDITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGSDTEDIPYGRWMR

XP_024036844.1 uncharacterized protein LOC112096879 [Citrus clementina]2.7e-2233.53Show/hide
Query:  IDYRGFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEF------------------RSAAMEIRSLVGKVEQVDLEDVSDENWGSSL
        ID  G N+F+ KF     K  ++  GPW +DR +++L +PKG     +  F                  R    E+  ++GKVE+++ ++  D  +G   
Subjt:  IDYRGFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEF------------------RSAAMEIRSLVGKVEQVDLEDVSDENWGSSL

Query:  RIKIQVDITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGSDTEDIPYGRWM
        RI+I ++IT PLK+ +FLK      +  + + YE+LPDFC+ CG +GH  KEC +  G   ED+ +G WM
Subjt:  RIKIQVDITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGSDTEDIPYGRWM

XP_024642377.1 uncharacterized protein LOC112422874 [Medicago truncatula]2.9e-2438.15Show/hide
Query:  NLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEFRSA------------------AMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQV
        NLFL KF + R   +I+ SGPW +DR +L+L     +    E++  +                   A ++  LVGK  +VD  D +    G S+RIK+ +
Subjt:  NLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEFRSA------------------AMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQV

Query:  DITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGSDTE--------DIPYGRWMR
        D+ +PLKRG+ LK  +     WI   YE+LP+FCY CG +GH +KECEE+TG D E        D  YG WMR
Subjt:  DITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGSDTE--------DIPYGRWMR

XP_035547259.1 uncharacterized protein LOC118348856 [Juglans regia]9.2e-2338.85Show/hide
Query:  GFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEFRSAAMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQVDITSPLKRGVFLKSVR
        G NLFL +F++ R K  I+  GPW +D  ++LL   +G+  G  +        I + +G VE+VD E  S+  WG  LRI+++V+I+ PL RG+ +K  +
Subjt:  GFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEFRSAAMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQVDITSPLKRGVFLKSVR

Query:  AGNEKWITMTYEKLPDFCYGCGGLGHIIKECE---EDTGSDTEDIPYGRWMREPTKL
         G+  WI   YE+LP+FCY CG LGH  K+CE        DT+ +P+G W+   T +
Subjt:  AGNEKWITMTYEKLPDFCYGCGGLGHIIKECE---EDTGSDTEDIPYGRWMREPTKL

TrEMBL top hitse value%identityAlignment
A0A5C7HLK8 CCHC-type domain-containing protein4.2e-2129.71Show/hide
Query:  IDYRGFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEFRSAAMEIRSL------------------VGKVEQVDLEDVSDENWGSSL
        I+  G N+F+ KF N   ++ I + GPW++D+++++L   +G  +  ++ F S  M I++                   +G+V  +D+   S + WG  L
Subjt:  IDYRGFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEFRSAAMEIRSL------------------VGKVEQVDLEDVSDENWGSSL

Query:  RIKIQVDITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGSDTE----DIPYGRWMR
        ++K+Q+DIT PLK+ ++L+  ++     +++ YE+LP+FCY CG +GH  KECE+              +G W+R
Subjt:  RIKIQVDITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGSDTE----DIPYGRWMR

A0A6J1D765 uncharacterized protein LOC1110179024.2e-2132.86Show/hide
Query:  GFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEFRSAAMEIR------------------SLVGKVEQVDLEDVSDENWGSSLRIKI
        G N+++  FK+   KS ++ SGPW +++++L+L  P       +M F   A  I+                  + +G VE+++  D +D   G  +R+++
Subjt:  GFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEFRSAAMEIR------------------SLVGKVEQVDLEDVSDENWGSSLRIKI

Query:  QVDITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGSDTEDIP--YGRWMREP--TKLVSK---------GPFGAQGEENKF
        ++D++ PL+RG+ LK+   G + W  + YEKLPDFCY CG +GH  +ECE+ +   T + P  YG W+R     K VS          G FG +G +   
Subjt:  QVDITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGSDTEDIP--YGRWMREP--TKLVSK---------GPFGAQGEENKF

Query:  GGGGRGRGRERLE
        G GGRG  R R E
Subjt:  GGGGRGRGRERLE

A0A6P9EID8 uncharacterized protein LOC1183488564.5e-2338.85Show/hide
Query:  GFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEFRSAAMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQVDITSPLKRGVFLKSVR
        G NLFL +F++ R K  I+  GPW +D  ++LL   +G+  G  +        I + +G VE+VD E  S+  WG  LRI+++V+I+ PL RG+ +K  +
Subjt:  GFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEFRSAAMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQVDITSPLKRGVFLKSVR

Query:  AGNEKWITMTYEKLPDFCYGCGGLGHIIKECE---EDTGSDTEDIPYGRWMREPTKL
         G+  WI   YE+LP+FCY CG LGH  K+CE        DT+ +P+G W+   T +
Subjt:  AGNEKWITMTYEKLPDFCYGCGGLGHIIKECE---EDTGSDTEDIPYGRWMREPTKL

A0A7N2MS75 CCHC-type domain-containing protein6.4e-2232.12Show/hide
Query:  LFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEF------------------RSAAMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQVD
        L+L +F + R K  I+E  PW Y+++++LL + +G+    ++                    R     I + +G+V  VD+ + S  NWG  LR+++ +D
Subjt:  LFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEF------------------RSAAMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQVD

Query:  ITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGS----DTEDIPYGRWMREPTKLVSKGPFGAQG-EENKFGGGG
        +T  L RG  +  +  G ++WIT  YE+LP+FCY CG L H +K+C+E+ GS    +  ++ YG WMR        G F   G E+ +F  GG
Subjt:  ITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGS----DTEDIPYGRWMREPTKLVSKGPFGAQG-EENKFGGGG

A0A7N2QWW0 CCHC-type domain-containing protein8.4e-2233.68Show/hide
Query:  LFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKG-----DCSGDEMEF-------------RSAAMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQVD
        L+L +F + R K  I+E  PW Y+++++LL + +G     D S  +  F             R     I + +G+V  VD+ + S  NWG  LR+++ +D
Subjt:  LFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKG-----DCSGDEMEF-------------RSAAMEIRSLVGKVEQVDLEDVSDENWGSSLRIKIQVD

Query:  ITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGS----DTEDIPYGRWMREPTKLVSKGPFGAQG-EENKFGGGG
        +T  L RG  +  +  G ++WIT  YE+LP+FCY CG L H +K+C+E+ GS    +  ++ YG WMR        G F   G E+ +F  GG
Subjt:  ITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGS----DTEDIPYGRWMREPTKLVSKGPFGAQG-EENKFGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAAAAGTCAGAGGAAGATGCAATTTTACATCAGTTTGCGGAGATGAAGGTTACGGCTGAGGAAAAGGCTAGTGTCTTTCACCAGCAAGAAGAAGCAATTGATGT
CACGGAAAAGAAGTTGGAGCATACGATTATTGACTACAGAGGATTCAATTTATTCCTTTGTAAGTTTAAAAACGCTCGAATCAAAAGTCACATTGTGGAGTCAGGGCCTT
GGTTTTATGATAGAACAATGTTGTTGCTTGCTGATCCTAAAGGCGACTGCAGTGGGGACGAAATGGAGTTCAGGTCTGCAGCAATGGAGATCAGAAGTTTAGTGGGTAAG
GTGGAACAAGTGGACCTTGAAGATGTGTCTGATGAGAACTGGGGAAGCTCATTACGGATTAAGATCCAAGTAGACATAACAAGTCCTTTGAAGAGGGGAGTGTTCTTGAA
GTCAGTACGAGCTGGTAATGAGAAATGGATAACAATGACTTATGAAAAACTCCCTGATTTTTGCTATGGCTGTGGTGGGTTGGGTCACATAATTAAAGAATGTGAGGAAG
ACACAGGTTCAGATACTGAGGATATCCCGTATGGACGGTGGATGAGGGAACCAACTAAGCTTGTTAGCAAGGGACCATTCGGTGCTCAGGGGGAGGAGAACAAGTTTGGG
GGAGGGGGAAGAGGTCGAGGGAGGGAGAGGTTGGAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAAAAAGTCAGAGGAAGATGCAATTTTACATCAGTTTGCGGAGATGAAGGTTACGGCTGAGGAAAAGGCTAGTGTCTTTCACCAGCAAGAAGAAGCAATTGATGT
CACGGAAAAGAAGTTGGAGCATACGATTATTGACTACAGAGGATTCAATTTATTCCTTTGTAAGTTTAAAAACGCTCGAATCAAAAGTCACATTGTGGAGTCAGGGCCTT
GGTTTTATGATAGAACAATGTTGTTGCTTGCTGATCCTAAAGGCGACTGCAGTGGGGACGAAATGGAGTTCAGGTCTGCAGCAATGGAGATCAGAAGTTTAGTGGGTAAG
GTGGAACAAGTGGACCTTGAAGATGTGTCTGATGAGAACTGGGGAAGCTCATTACGGATTAAGATCCAAGTAGACATAACAAGTCCTTTGAAGAGGGGAGTGTTCTTGAA
GTCAGTACGAGCTGGTAATGAGAAATGGATAACAATGACTTATGAAAAACTCCCTGATTTTTGCTATGGCTGTGGTGGGTTGGGTCACATAATTAAAGAATGTGAGGAAG
ACACAGGTTCAGATACTGAGGATATCCCGTATGGACGGTGGATGAGGGAACCAACTAAGCTTGTTAGCAAGGGACCATTCGGTGCTCAGGGGGAGGAGAACAAGTTTGGG
GGAGGGGGAAGAGGTCGAGGGAGGGAGAGGTTGGAGGTTTGA
Protein sequenceShow/hide protein sequence
MTKKSEEDAILHQFAEMKVTAEEKASVFHQQEEAIDVTEKKLEHTIIDYRGFNLFLCKFKNARIKSHIVESGPWFYDRTMLLLADPKGDCSGDEMEFRSAAMEIRSLVGK
VEQVDLEDVSDENWGSSLRIKIQVDITSPLKRGVFLKSVRAGNEKWITMTYEKLPDFCYGCGGLGHIIKECEEDTGSDTEDIPYGRWMREPTKLVSKGPFGAQGEENKFG
GGGRGRGRERLEV