; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011388 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011388
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr1:23417319..23419051
RNA-Seq ExpressionLag0011388
SyntenyLag0011388
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]8.1e-2433.19Show/hide
Query:  FVNDLARAKYQEVLKRDFLFERGF-------GSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNLQD
        F ND A+A++Q    R   FE GF       G   P  ++  +  L W++F   P +VN+++V+EFYAN+   + + + VRG  ++++  AIN  F+LQD
Subjt:  FVNDLARAKYQEVLKRDFLFERGF-------GSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNLQD

Query:  F--PHAVFNEMMVAPSSD---------------------QLSAAVRESEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIVDC
            HA F E   +   D                      ++    +  A  W  F++ +L+PT+H++TVS  R+LL  +I+ S  IDVG  I  ++ DC
Subjt:  F--PHAVFNEMMVAPSSD---------------------QLSAAVRESEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIVDC

Query:  WKKKVGKLFFPNTITMLCRNAGVPVDENDVIL
          KK   L FPN IT LCR   V  +  D IL
Subjt:  WKKKVGKLFFPNTITMLCRNAGVPVDENDVIL

KAE8718449.1 hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]3.1e-2332.33Show/hide
Query:  FVNDLARAKYQEVLKRDFLFERGF-------GSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNLQD
        F ND A+A++Q    R+  FE GF       G   P  ++  +  L W +F   P +VN+++V+EFYAN+   +   + VRG  ++++  AIN  F+LQ+
Subjt:  FVNDLARAKYQEVLKRDFLFERGF-------GSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNLQD

Query:  F--PHAVFNEMMVAPSSD---------------------QLSAAVRESEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIVDC
            HA+F E   +   D                      ++    +  A  W  F++ +L+PT+H++TVS  R+LL  +++ S  IDVG+ I  ++ DC
Subjt:  F--PHAVFNEMMVAPSSD---------------------QLSAAVRESEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIVDC

Query:  WKKKVGKLFFPNTITMLCRNAGVPVDENDVIL
          KK   L FPN IT LCR   V  +  D IL
Subjt:  WKKKVGKLFFPNTITMLCRNAGVPVDENDVIL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.4e-3039.37Show/hide
Query:  IHFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFN
        + F  + A  +Y+  +  R    E+GF  D       LP F+   I    W+QFCA PE     +VREFYANL    +  V VRGV V WS EAIN +F 
Subjt:  IHFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFN

Query:  LQD--FPHAVFNE-------------MMVAPSSDQLSA-----AVRES---EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEI
        L D    H+ F E             + VA +   +SA      +R +    A  W  F++  LLPTTH  TVS+DR+LL  ++L   SI+VG+ I SEI
Subjt:  LQD--FPHAVFNE-------------MMVAPSSDQLSA-----AVRES---EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEI

Query:  VDCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKGIIDTPNLARVQCTQE
          C  +K G LFFP+ IT LCRNA  P   N+  L + G ID   +AR+  TQE
Subjt:  VDCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKGIIDTPNLARVQCTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.8e-3037.75Show/hide
Query:  IHFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFN
        + F  + A  +Y+  +  R    E+GF  D       LP F+   I    W+QFCA PE     +VREFYANL   ++  V VRGV V WS EAIN +F 
Subjt:  IHFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFN

Query:  LQD--FPHAVFNEMM-----------VAPSSDQLSAAVRES----------EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEI
        L D    H+ F + +           VA +  + + + + +           A  W  F++ RLLPTTH  TVS+DR+LL  ++L   SI+VG+ I SEI
Subjt:  LQD--FPHAVFNEMM-----------VAPSSDQLSAAVRES----------EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEI

Query:  VDCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKGIIDTPNLARV
          C  +K G LFFP+ IT LCRNA  P   N+  L + G ID   +AR+
Subjt:  VDCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKGIIDTPNLARV

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.0e-2634.45Show/hide
Query:  IHFVNDLARAKYQE-------VLKRDFLFERGFGSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNL
        + F +  A  +Y+E        ++++F+++     + P F+   I    W+ FCA PE     +VREFY N+   DD  V +RGV V  S EAIN +F+L
Subjt:  IHFVNDLARAKYQE-------VLKRDFLFERGFGSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNL

Query:  QD--FPHAVFNEMMVAP------------------SSDQLSAAVRES---EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIV
         D    H+ F E +  P                  SS      +R S    A  W  F++ RLLPTTH  TVS++ V L +++L   SI+VG+ I  EI 
Subjt:  QD--FPHAVFNEMMVAP------------------SSDQLSAAVRES---EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIV

Query:  DCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKG
         C  +K G LFFP+ IT +CRN   P   N+  L + G
Subjt:  DCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.6e-3039.37Show/hide
Query:  IHFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFN
        + F  + A  +Y+  +  R    E+GF  D       LP F+   I    W+QFCA PE     +VREFYANL    +  V VRGV V WS EAIN +F 
Subjt:  IHFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFN

Query:  LQD--FPHAVFNE-------------MMVAPSSDQLSA-----AVRES---EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEI
        L D    H+ F E             + VA +   +SA      +R +    A  W  F++  LLPTTH  TVS+DR+LL  ++L   SI+VG+ I SEI
Subjt:  LQD--FPHAVFNE-------------MMVAPSSDQLSA-----AVRES---EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEI

Query:  VDCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKGIIDTPNLARVQCTQE
          C  +K G LFFP+ IT LCRNA  P   N+  L + G ID   +AR+  TQE
Subjt:  VDCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKGIIDTPNLARVQCTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)2.8e-3037.75Show/hide
Query:  IHFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFN
        + F  + A  +Y+  +  R    E+GF  D       LP F+   I    W+QFCA PE     +VREFYANL   ++  V VRGV V WS EAIN +F 
Subjt:  IHFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFN

Query:  LQD--FPHAVFNEMM-----------VAPSSDQLSAAVRES----------EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEI
        L D    H+ F + +           VA +  + + + + +           A  W  F++ RLLPTTH  TVS+DR+LL  ++L   SI+VG+ I SEI
Subjt:  LQD--FPHAVFNEMM-----------VAPSSDQLSAAVRES----------EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEI

Query:  VDCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKGIIDTPNLARV
          C  +K G LFFP+ IT LCRNA  P   N+  L + G ID   +AR+
Subjt:  VDCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKGIIDTPNLARV

A0A2P5DAQ2 Uncharacterized protein1.4e-2634.45Show/hide
Query:  IHFVNDLARAKYQE-------VLKRDFLFERGFGSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNL
        + F +  A  +Y+E        ++++F+++     + P F+   I    W+ FCA PE     +VREFY N+   DD  V +RGV V  S EAIN +F+L
Subjt:  IHFVNDLARAKYQE-------VLKRDFLFERGFGSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNL

Query:  QD--FPHAVFNEMMVAP------------------SSDQLSAAVRES---EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIV
         D    H+ F E +  P                  SS      +R S    A  W  F++ RLLPTTH  TVS++ V L +++L   SI+VG+ I  EI 
Subjt:  QD--FPHAVFNEMMVAP------------------SSDQLSAAVRES---EANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIV

Query:  DCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKG
         C  +K G LFFP+ IT +CRN   P   N+  L + G
Subjt:  DCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKG

A0A6A2WM54 Uncharacterized protein3.9e-2433.19Show/hide
Query:  FVNDLARAKYQEVLKRDFLFERGF-------GSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNLQD
        F ND A+A++Q    R   FE GF       G   P  ++  +  L W++F   P +VN+++V+EFYAN+   + + + VRG  ++++  AIN  F+LQD
Subjt:  FVNDLARAKYQEVLKRDFLFERGF-------GSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNLQD

Query:  F--PHAVFNEMMVAPSSD---------------------QLSAAVRESEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIVDC
            HA F E   +   D                      ++    +  A  W  F++ +L+PT+H++TVS  R+LL  +I+ S  IDVG  I  ++ DC
Subjt:  F--PHAVFNEMMVAPSSD---------------------QLSAAVRESEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIVDC

Query:  WKKKVGKLFFPNTITMLCRNAGVPVDENDVIL
          KK   L FPN IT LCR   V  +  D IL
Subjt:  WKKKVGKLFFPNTITMLCRNAGVPVDENDVIL

A0A6A3BU96 Uncharacterized protein1.5e-2332.33Show/hide
Query:  FVNDLARAKYQEVLKRDFLFERGF-------GSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNLQD
        F ND A+A++Q    R+  FE GF       G   P  ++  +  L W +F   P +VN+++V+EFYAN+   +   + VRG  ++++  AIN  F+LQ+
Subjt:  FVNDLARAKYQEVLKRDFLFERGF-------GSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNLQD

Query:  F--PHAVFNEMMVAPSSD---------------------QLSAAVRESEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIVDC
            HA+F E   +   D                      ++    +  A  W  F++ +L+PT+H++TVS  R+LL  +++ S  IDVG+ I  ++ DC
Subjt:  F--PHAVFNEMMVAPSSD---------------------QLSAAVRESEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIVDC

Query:  WKKKVGKLFFPNTITMLCRNAGVPVDENDVIL
          KK   L FPN IT LCR   V  +  D IL
Subjt:  WKKKVGKLFFPNTITMLCRNAGVPVDENDVIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAACGAGAGCGAGAAAAGAGAGAGATAACGAGGAAGAAGAGGTACCGGTTACGCCGGAAGTGCAAAAAGGGAAAACCAAGAAGAAAAGAACGCCAGAGGAAAA
AGAAGGCAAGAAAAGGAGAAGGCAGCAACGAGCTGCAGAACAGGAAGAAGTTCAGGAGGTGGCAGAGGTTGTTGCCACTGCAGCGGAGGAAGGAAATACTCAAGAACCTG
AAGTACAAAACCCGGATACGGTTCAAGAAGAGAATGTTAAGGAGAATCAAGAAACAGAGACTGACGAAGTTCGAGGCGAACAGACCGTAGAGGTACCTGAAGAAGGGAAT
GAGCAGGGATTGGTGCAGGAGGCTCGGGTTGAAGTAATCATGCCTGAACCGCCAAAGAGGCGCCGCATCAAGAGGAAGGCAGGCGGCGTCAGGGTAATTCGAAATACCCC
ATCGCCTCCATCGTCAGATTCTGAGGAGGAAAGAAGGGAACAAGAAAAGAAGGAGGCTGAAGAGAAGACGAAAGAAGAAGAAGCAAAAAAGGCTGAGGAAGAGATTCTGC
CCAAGCGAAGAGAAGACAGGGGCAAAGGAATTGCTGAGGCATCGGGTGAGACTGGCGAGATTGAGGAACCAAGGTTGCCTTTTATTCACTTCGTCAACGACCTTGCTCGA
GCAAAATACCAGGAGGTGCTGAAACGTGACTTCTTGTTCGAACGAGGATTTGGCAGTGATTTGCCCAGGTTCTTAGAGTCTGGAATAGCGAACCTCGGGTGGAGGCAGTT
TTGTGCGGAACCAGAAGCTGTCAATTCCAACATTGTTCGGGAATTTTACGCCAATCTGGACGTTAAGGATGATTTTGAGGTTATCGTTCGAGGAGTGCCTGTACAGTGGA
GCCCAGAAGCCATTAATGATTTGTTCAATCTCCAAGATTTTCCGCATGCAGTTTTTAATGAAATGATGGTTGCACCATCAAGCGACCAATTAAGTGCGGCTGTCCGGGAG
AGTGAAGCCAACACTTGGATGGGTTTCATTAGGCTACGTTTGCTGCCGACAACACACGACTCCACAGTATCTCGGGACAGGGTATTGCTTGCCTTTGCCATTCTTCGCTC
GATGAGTATTGATGTAGGAAAAAAAATTTCTTCTGAGATTGTTGATTGCTGGAAAAAGAAGGTGGGGAAGTTGTTCTTCCCAAATACAATTACTATGTTGTGCAGAAACG
CAGGGGTTCCAGTGGATGAGAATGATGTAATTCTATTTGATAAGGGAATCATTGATACGCCCAATTTGGCGCGGGTCCAGTGTACGCAAGAGATACGACAAGGAGGGCTA
ATCTACGGCATGAATATGATTCTAGAACAACTGGCACTGTTGGCCAGCAGACAGGAGTTTGCCTTTCAGCATTTTGGGACAAGACCGAATGGGAGTGTTGGGTTCCTAGA
ACAGTCCAACACTACCTTTAACCTTTACCTGAGCACTCTGCAAAACCAAGCTCTGCTGCAGCAAAATGATTCCTCCGGCATGGACAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAACGAGAGCGAGAAAAGAGAGAGATAACGAGGAAGAAGAGGTACCGGTTACGCCGGAAGTGCAAAAAGGGAAAACCAAGAAGAAAAGAACGCCAGAGGAAAA
AGAAGGCAAGAAAAGGAGAAGGCAGCAACGAGCTGCAGAACAGGAAGAAGTTCAGGAGGTGGCAGAGGTTGTTGCCACTGCAGCGGAGGAAGGAAATACTCAAGAACCTG
AAGTACAAAACCCGGATACGGTTCAAGAAGAGAATGTTAAGGAGAATCAAGAAACAGAGACTGACGAAGTTCGAGGCGAACAGACCGTAGAGGTACCTGAAGAAGGGAAT
GAGCAGGGATTGGTGCAGGAGGCTCGGGTTGAAGTAATCATGCCTGAACCGCCAAAGAGGCGCCGCATCAAGAGGAAGGCAGGCGGCGTCAGGGTAATTCGAAATACCCC
ATCGCCTCCATCGTCAGATTCTGAGGAGGAAAGAAGGGAACAAGAAAAGAAGGAGGCTGAAGAGAAGACGAAAGAAGAAGAAGCAAAAAAGGCTGAGGAAGAGATTCTGC
CCAAGCGAAGAGAAGACAGGGGCAAAGGAATTGCTGAGGCATCGGGTGAGACTGGCGAGATTGAGGAACCAAGGTTGCCTTTTATTCACTTCGTCAACGACCTTGCTCGA
GCAAAATACCAGGAGGTGCTGAAACGTGACTTCTTGTTCGAACGAGGATTTGGCAGTGATTTGCCCAGGTTCTTAGAGTCTGGAATAGCGAACCTCGGGTGGAGGCAGTT
TTGTGCGGAACCAGAAGCTGTCAATTCCAACATTGTTCGGGAATTTTACGCCAATCTGGACGTTAAGGATGATTTTGAGGTTATCGTTCGAGGAGTGCCTGTACAGTGGA
GCCCAGAAGCCATTAATGATTTGTTCAATCTCCAAGATTTTCCGCATGCAGTTTTTAATGAAATGATGGTTGCACCATCAAGCGACCAATTAAGTGCGGCTGTCCGGGAG
AGTGAAGCCAACACTTGGATGGGTTTCATTAGGCTACGTTTGCTGCCGACAACACACGACTCCACAGTATCTCGGGACAGGGTATTGCTTGCCTTTGCCATTCTTCGCTC
GATGAGTATTGATGTAGGAAAAAAAATTTCTTCTGAGATTGTTGATTGCTGGAAAAAGAAGGTGGGGAAGTTGTTCTTCCCAAATACAATTACTATGTTGTGCAGAAACG
CAGGGGTTCCAGTGGATGAGAATGATGTAATTCTATTTGATAAGGGAATCATTGATACGCCCAATTTGGCGCGGGTCCAGTGTACGCAAGAGATACGACAAGGAGGGCTA
ATCTACGGCATGAATATGATTCTAGAACAACTGGCACTGTTGGCCAGCAGACAGGAGTTTGCCTTTCAGCATTTTGGGACAAGACCGAATGGGAGTGTTGGGTTCCTAGA
ACAGTCCAACACTACCTTTAACCTTTACCTGAGCACTCTGCAAAACCAAGCTCTGCTGCAGCAAAATGATTCCTCCGGCATGGACAAATAA
Protein sequenceShow/hide protein sequence
MAKTRARKERDNEEEEVPVTPEVQKGKTKKKRTPEEKEGKKRRRQQRAAEQEEVQEVAEVVATAAEEGNTQEPEVQNPDTVQEENVKENQETETDEVRGEQTVEVPEEGN
EQGLVQEARVEVIMPEPPKRRRIKRKAGGVRVIRNTPSPPSSDSEEERREQEKKEAEEKTKEEEAKKAEEEILPKRREDRGKGIAEASGETGEIEEPRLPFIHFVNDLAR
AKYQEVLKRDFLFERGFGSDLPRFLESGIANLGWRQFCAEPEAVNSNIVREFYANLDVKDDFEVIVRGVPVQWSPEAINDLFNLQDFPHAVFNEMMVAPSSDQLSAAVRE
SEANTWMGFIRLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGKKISSEIVDCWKKKVGKLFFPNTITMLCRNAGVPVDENDVILFDKGIIDTPNLARVQCTQEIRQGGL
IYGMNMILEQLALLASRQEFAFQHFGTRPNGSVGFLEQSNTTFNLYLSTLQNQALLQQNDSSGMDK