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Lag0011406 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011406
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:23877291..23877797
RNA-Seq ExpressionLag0011406
SyntenyLag0011406
Gene Ontology termsGO:0004518 - nuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019160043.1 PREDICTED: uncharacterized protein LOC109156647 [Ipomoea nil]2.3e-1341.46Show/hide
Query:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMGTQK
        KP ++F+ ET  + S+   ++  L +++CL+V    RGGGL LLWN  +DV+++ YS  +ID V++ +   WRFTGF G+ K
Subjt:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMGTQK

XP_021600717.1 uncharacterized protein LOC110606275 [Manihot esculenta]1.8e-1344.32Show/hide
Query:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMGTQKLGTQET
        KP ++F+METK +  R   IK  L F HC SV C G GGGL L+W   + + I  Y    ID+ I D    WRFTGF G  + G + T
Subjt:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMGTQKLGTQET

XP_021607775.1 uncharacterized protein LOC110611696 [Manihot esculenta]1.4e-1344.32Show/hide
Query:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMGTQKLGTQET
        KP ++F+METK +  R   IK  L+F HC SV C G GGGL L+W   + + I  Y    ID+ I D    WRFTGF G  + G + T
Subjt:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMGTQKLGTQET

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]2.1e-1451.9Show/hide
Query:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMG
        +PQLVF+ ETK + +     K  L+FD C+SV   G+ GGL+LLWN+  +V+I S S GHID++I D  G WRFTGF G
Subjt:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMG

XP_030922943.1 uncharacterized protein LOC115949807 [Quercus lobata]6.1e-1450Show/hide
Query:  PQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGG--WRFTGFMG
        P++VF+ ETK  N R   +KF+L+F + L VP +GR GGL LLW++  +++I SYS  HIDA+I ++D G  WRFT F G
Subjt:  PQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGG--WRFTGFMG

TrEMBL top hitse value%identityAlignment
A0A2N9GBF2 Reverse transcriptase domain-containing protein4.2e-1348.1Show/hide
Query:  PQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGG-WRFTGFMG
        P ++F+METK D      I+  L F  C SVPC GR GGL LLWN    V I ++S+ H+D+ ++ +DG  WRFTGF G
Subjt:  PQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGG-WRFTGFMG

A0A2N9GKZ7 Uncharacterized protein4.2e-1348.1Show/hide
Query:  PQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGG-WRFTGFMG
        P ++F+METK D      I+  L F  C SVPC GR GGL LLWN    V I ++S+ H+D+ ++ +DG  WRFTGF G
Subjt:  PQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGG-WRFTGFMG

A0A2N9I611 Uncharacterized protein3.2e-1340Show/hide
Query:  PQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMGTQKLGTQETDSLGRGAIIKRIR
        P+++F+ ETK +      I+  L +D    VP KGR GGL LLW+  +D+ I SY+  HIDA IK  +G WRFTGF G  +   ++    G  A++K ++
Subjt:  PQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMGTQKLGTQETDSLGRGAIIKRIR

A0A2N9IXX1 Reverse transcriptase domain-containing protein2.5e-1346.25Show/hide
Query:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDG-GWRFTGFMG
        +P+++F+METK D+ R  GI+  L F  C SVP   R GGL ++WN  + + I ++S+ HIDA ++ +DG  WRFTGF G
Subjt:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDG-GWRFTGFMG

A0A6J1DUG8 uncharacterized protein LOC1110241351.0e-1451.9Show/hide
Query:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMG
        +PQLVF+ ETK + +     K  L+FD C+SV   G+ GGL+LLWN+  +V+I S S GHID++I D  G WRFTGF G
Subjt:  KPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCCCAACTTGTGTTTGTGATGGAAACAAAGTGTGATAATTCTAGGAGCAGTGGGATTAAATTCAGTCTGAATTTTGACCATTGCCTAAGTGTCCCTTGTAAAGG
CAGAGGAGGGGGGCTTATTTTGCTGTGGAATGCTTCTATTGATGTTAAGATCTTATCGTATTCGGAGGGGCATATTGATGCTGTTATAAAGGATAGTGATGGTGGATGGA
GATTTACCGGTTTTATGGGCACCCAGAAACTGGGTACTCAGGAGACAGATTCACTTGGAAGAGGGGCAATAATAAAAAGAATCAGATTAAAGAAAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACCCCAACTTGTGTTTGTGATGGAAACAAAGTGTGATAATTCTAGGAGCAGTGGGATTAAATTCAGTCTGAATTTTGACCATTGCCTAAGTGTCCCTTGTAAAGG
CAGAGGAGGGGGGCTTATTTTGCTGTGGAATGCTTCTATTGATGTTAAGATCTTATCGTATTCGGAGGGGCATATTGATGCTGTTATAAAGGATAGTGATGGTGGATGGA
GATTTACCGGTTTTATGGGCACCCAGAAACTGGGTACTCAGGAGACAGATTCACTTGGAAGAGGGGCAATAATAAAAAGAATCAGATTAAAGAAAGGCTAG
Protein sequenceShow/hide protein sequence
MKPQLVFVMETKCDNSRSSGIKFSLNFDHCLSVPCKGRGGGLILLWNASIDVKILSYSEGHIDAVIKDSDGGWRFTGFMGTQKLGTQETDSLGRGAIIKRIRLKKG