; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011409 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011409
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:24066299..24066859
RNA-Seq ExpressionLag0011409
SyntenyLag0011409
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]7.6e-4449.46Show/hide
Query:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ
        MK +VP KFK+P  K YDG+ D + HLD Y  W D +G++ AIRCR FSFTLTGST+ WFQ+LKR+SI+SFKEL RAF+++F G   + +P   LLTIKQ
Subjt:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ

Query:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSFD
        +  ESL DY+ RFN+E +QVEG ++   L+   +G++D +L+ S  K    T++E  S AQ YMS  EL+ SK+    +Y+ ++
Subjt:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSFD

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]2.0e-4450.54Show/hide
Query:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ
        MK +VP KFK+PT K +DG  D V HLD YR WMD +GVS A++CR FS TL+GS + WF++LKR SI+SFK L +AF+++F+G R + +P   LLTIKQ
Subjt:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ

Query:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSFDRD
        +  ESLHDY+ RFNEE +QVEG +   +L+A  + + D  L  S  K  P T++E +S AQKYMSA E   SK+    + S  +R+
Subjt:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSFDRD

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]4.1e-4248.09Show/hide
Query:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ
        MK +   KFK+P    YDG+ D + HLD YR W D + +  AIRCR FSFTLTGS + WF++LKR SI+SFKEL  AF+++F+G R + KP   LLTIKQ
Subjt:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ

Query:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSF
        +  ESL +Y+ RFNEE +QVEG ++   L+A  +G++D +L+ S  K  P T+ E +S AQKYMSA EL+   +   +  +++
Subjt:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSF

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.7e-4352.87Show/hide
Query:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ
        M+ +VP KFK+PT K +D   D V HLD YR WMD +GVS A+RCR FS TL GS + WF++LKR SI+SFK L RAF+++F+G R + +P   LLTIKQ
Subjt:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ

Query:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKK
        +T ESL DY+ RFNEE +QVEG ++  +L+A  +G+ D  L  S  K  P+T++E +S AQ+YMSA E   SK+
Subjt:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKK

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]6.8e-4553.45Show/hide
Query:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ
        M+ +VP KFK+PT K +DG  + V HLD YR WMD +GVS+AIRCR FS TL GS + WF++LKR SI+SFK L RAF+++F+G R + +P   LLTIKQ
Subjt:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ

Query:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKK
        +T ESLHDY+ RFNEE +Q+EG ++  +L+A  +G+ D  L  S +K  P T++E +S AQ+YMSA E   SK+
Subjt:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKK

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166193.7e-4449.46Show/hide
Query:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ
        MK +VP KFK+P  K YDG+ D + HLD Y  W D +G++ AIRCR FSFTLTGST+ WFQ+LKR+SI+SFKEL RAF+++F G   + +P   LLTIKQ
Subjt:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ

Query:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSFD
        +  ESL DY+ RFN+E +QVEG ++   L+   +G++D +L+ S  K    T++E  S AQ YMS  EL+ SK+    +Y+ ++
Subjt:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSFD

A0A6J1D7D2 uncharacterized protein LOC1110183079.6e-4550.54Show/hide
Query:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ
        MK +VP KFK+PT K +DG  D V HLD YR WMD +GVS A++CR FS TL+GS + WF++LKR SI+SFK L +AF+++F+G R + +P   LLTIKQ
Subjt:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ

Query:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSFDRD
        +  ESLHDY+ RFNEE +QVEG +   +L+A  + + D  L  S  K  P T++E +S AQKYMSA E   SK+    + S  +R+
Subjt:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSFDRD

A0A6J1DWY0 uncharacterized protein LOC1110252938.2e-4452.87Show/hide
Query:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ
        M+ +VP KFK+PT K +D   D V HLD YR WMD +GVS A+RCR FS TL GS + WF++LKR SI+SFK L RAF+++F+G R + +P   LLTIKQ
Subjt:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ

Query:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKK
        +T ESL DY+ RFNEE +QVEG ++  +L+A  +G+ D  L  S  K  P+T++E +S AQ+YMSA E   SK+
Subjt:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKK

A0A6J1DZ49 uncharacterized protein LOC1110248512.0e-4248.09Show/hide
Query:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ
        MK +   KFK+P    YDG+ D + HLD YR W D + +  AIRCR FSFTLTGS + WF++LKR SI+SFKEL  AF+++F+G R + KP   LLTIKQ
Subjt:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ

Query:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSF
        +  ESL +Y+ RFNEE +QVEG ++   L+A  +G++D +L+ S  K  P T+ E +S AQKYMSA EL+   +   +  +++
Subjt:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSF

A0A6J1E1E7 uncharacterized protein LOC1110255483.3e-4553.45Show/hide
Query:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ
        M+ +VP KFK+PT K +DG  + V HLD YR WMD +GVS+AIRCR FS TL GS + WF++LKR SI+SFK L RAF+++F+G R + +P   LLTIKQ
Subjt:  MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQ

Query:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKK
        +T ESLHDY+ RFNEE +Q+EG ++  +L+A  +G+ D  L  S +K  P T++E +S AQ+YMSA E   SK+
Subjt:  QTGESLHDYITRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTGAGGTGCCCCAGAAGTTCAAAGTACCCACATTCAAGTCGTATGATGGCAATAAGGACACAGTACAACACCTAGACCCCTACAGGACATGGATGGACTTCCA
CGGCGTTTCAAATGCAATCAGATGTCGTGCTTTCTCTTTCACTTTGACAGGATCAACCAAACAATGGTTTCAAAGGTTGAAAAGGAGATCCATCAACTCTTTCAAAGAAT
TAACCCGAGCATTCCTCTCGAAGTTCATGGGAGACAGAAAACAGCTCAAGCCTCACATCAACCTCTTAACTATCAAACAACAGACAGGTGAGAGTTTGCATGATTATATA
ACACGTTTTAACGAGGAAGCAGTGCAGGTTGAGGGATACAGTGAGAGAGCAACCCTAGTAGCCATAACAGCAGGACTGGAGGATGGGAAATTACTGAATTCAATAGATAA
AAGCCAACCTCACACTTATGCTGAGTTTGTCTCTATAGCACAGAAGTACATGAGTGCAAAGGAGTTGCTTAGATCGAAGAAGTCAGGACACAAGAGGTATTCTTCATTCG
ACCGAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTGAGGTGCCCCAGAAGTTCAAAGTACCCACATTCAAGTCGTATGATGGCAATAAGGACACAGTACAACACCTAGACCCCTACAGGACATGGATGGACTTCCA
CGGCGTTTCAAATGCAATCAGATGTCGTGCTTTCTCTTTCACTTTGACAGGATCAACCAAACAATGGTTTCAAAGGTTGAAAAGGAGATCCATCAACTCTTTCAAAGAAT
TAACCCGAGCATTCCTCTCGAAGTTCATGGGAGACAGAAAACAGCTCAAGCCTCACATCAACCTCTTAACTATCAAACAACAGACAGGTGAGAGTTTGCATGATTATATA
ACACGTTTTAACGAGGAAGCAGTGCAGGTTGAGGGATACAGTGAGAGAGCAACCCTAGTAGCCATAACAGCAGGACTGGAGGATGGGAAATTACTGAATTCAATAGATAA
AAGCCAACCTCACACTTATGCTGAGTTTGTCTCTATAGCACAGAAGTACATGAGTGCAAAGGAGTTGCTTAGATCGAAGAAGTCAGGACACAAGAGGTATTCTTCATTCG
ACCGAGACTAG
Protein sequenceShow/hide protein sequence
MKAEVPQKFKVPTFKSYDGNKDTVQHLDPYRTWMDFHGVSNAIRCRAFSFTLTGSTKQWFQRLKRRSINSFKELTRAFLSKFMGDRKQLKPHINLLTIKQQTGESLHDYI
TRFNEEAVQVEGYSERATLVAITAGLEDGKLLNSIDKSQPHTYAEFVSIAQKYMSAKELLRSKKSGHKRYSSFDRD