; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011415 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011415
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPol polyprotein
Genome locationchr1:24201158..24204228
RNA-Seq ExpressionLag0011415
SyntenyLag0011415
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_020205041.1 uncharacterized protein LOC109790319 [Cajanus cajan]7.1e-0466.67Show/hide
Query:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDGTYR
        IK ILEKIV PNRKDWS RL+D LWA R   K P G +R
Subjt:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDGTYR

XP_021741174.1 uncharacterized protein LOC110707470 [Chenopodium quinoa]9.2e-0469.44Show/hide
Query:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG
        IK ILEK+V+PNRKDWSLRL+D LWA R   K P G
Subjt:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG

XP_027152163.1 uncharacterized protein LOC113752239 [Coffea eugenioides]9.2e-0472.22Show/hide
Query:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG
        IK ILEK V+PNRKDWSLRLDD LWA R   K P G
Subjt:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG

XP_031131725.1 protein FAR1-RELATED SEQUENCE 5-like [Ipomoea triloba]1.4e-0465.79Show/hide
Query:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDGTY
        IK +LEK+V PNRKDWSL+LDD LWA R   K P G Y
Subjt:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDGTY

XP_031279438.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116137872 [Pistacia vera]1.9e-0459.32Show/hide
Query:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG--TYRRENREKKQNKTLKLIHSA
        IK ILEKIV+PNRKDWSLRLDD LWA R   K P G   YR E R K  +  ++L H A
Subjt:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG--TYRRENREKKQNKTLKLIHSA

TrEMBL top hitse value%identityAlignment
A0A6P6T0V8 uncharacterized protein LOC1136964564.5e-0472.22Show/hide
Query:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG
        IK ILEK V+PNRKDWSLRLDD LWA R   K P G
Subjt:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG

A0A6P6VJZ0 uncharacterized protein LOC1137232954.5e-0472.22Show/hide
Query:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG
        IK ILEK V+PNRKDWSLRLDD LWA R   K P G
Subjt:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG

A0A6P6WXZ3 uncharacterized protein LOC1137355114.5e-0472.22Show/hide
Query:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG
        IK ILEK V+PNRKDWSLRLDD LWA R   K P G
Subjt:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG

A0A6P6WY65 uncharacterized protein LOC1137373294.5e-0472.22Show/hide
Query:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG
        IK ILEK V+PNRKDWSLRLDD LWA R   K P G
Subjt:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG

A0A6P6X8T1 Reverse transcriptase4.5e-0472.22Show/hide
Query:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG
        IK ILEK V+PNRKDWSLRLDD LWA R   K P G
Subjt:  IKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAGTTGAATCATCTAATAGCTATCAAAGAAATCTTAGAAAAGATTGTGGACCCTAATAGGAAAGATTGGTCTCTCAGATTAGATGATGTATTATGGGCTACAAG
GCAGCATTCAAAGCTCCCTGACGGGACTTATCGAAGAGAGAACCGAGAGAAGAAGCAAAATAAAACCCTAAAATTGATACATTCGGCGGAATTAAAGAAGGGATTTATAG
GAAAAATTGCCGCGACGTCCAGACGTTGGGCACGGCGTCGAGACGTCGTGCCTATTTTCAACGGCCTCGACTTTAATCCTCGTCGTTTCTTGCTCGATTTGGGCCTCGAA
CCTTTGACTCCTTGGAACTATTCTTCGGGCTCGTCACAATCCTCACGGTCTTCTCACCTCCTCGAGATCCATGGCCCTCAAGCAGTTGCTCAAGTCTCATCTGATTCATC
CTCTCATCTAACGACTCAAGCATTAGAGGAGGATGATCGAAGTGGGGCTGCCTTCCCTGAGCTTGGGGCTCCTCTTTTGGTTCTTCTGTTGGGGTGGAGGTGTTGTAGGA
TGGCTAATCTCTTCACGGGGTCCCACACGACCCCAGTGGCTCTACAGAGTGCTGTGATGAGGGAAGGTGCCCTAGACCTACTCTGGTCGTTCCTCTGTGAATCTGGCACA
TGGAAGAATATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAGTTGAATCATCTAATAGCTATCAAAGAAATCTTAGAAAAGATTGTGGACCCTAATAGGAAAGATTGGTCTCTCAGATTAGATGATGTATTATGGGCTACAAG
GCAGCATTCAAAGCTCCCTGACGGGACTTATCGAAGAGAGAACCGAGAGAAGAAGCAAAATAAAACCCTAAAATTGATACATTCGGCGGAATTAAAGAAGGGATTTATAG
GAAAAATTGCCGCGACGTCCAGACGTTGGGCACGGCGTCGAGACGTCGTGCCTATTTTCAACGGCCTCGACTTTAATCCTCGTCGTTTCTTGCTCGATTTGGGCCTCGAA
CCTTTGACTCCTTGGAACTATTCTTCGGGCTCGTCACAATCCTCACGGTCTTCTCACCTCCTCGAGATCCATGGCCCTCAAGCAGTTGCTCAAGTCTCATCTGATTCATC
CTCTCATCTAACGACTCAAGCATTAGAGGAGGATGATCGAAGTGGGGCTGCCTTCCCTGAGCTTGGGGCTCCTCTTTTGGTTCTTCTGTTGGGGTGGAGGTGTTGTAGGA
TGGCTAATCTCTTCACGGGGTCCCACACGACCCCAGTGGCTCTACAGAGTGCTGTGATGAGGGAAGGTGCCCTAGACCTACTCTGGTCGTTCCTCTGTGAATCTGGCACA
TGGAAGAATATATAA
Protein sequenceShow/hide protein sequence
MVKLNHLIAIKEILEKIVDPNRKDWSLRLDDVLWATRQHSKLPDGTYRRENREKKQNKTLKLIHSAELKKGFIGKIAATSRRWARRRDVVPIFNGLDFNPRRFLLDLGLE
PLTPWNYSSGSSQSSRSSHLLEIHGPQAVAQVSSDSSSHLTTQALEEDDRSGAAFPELGAPLLVLLLGWRCCRMANLFTGSHTTPVALQSAVMREGALDLLWSFLCESGT
WKNI