; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011416 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011416
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr1:24212246..24223878
RNA-Seq ExpressionLag0011416
SyntenyLag0011416
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040194.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-1647.52Show/hide
Query:  PRGNRSSLQTRKVAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED
        PRGNR  LQT ++ K                  VEIELP+PDTLPTSAESS S+SSTW+E Y ESV++   +LF K S  R A +V    E     +  D
Subjt:  PRGNRSSLQTRKVAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED

Query:  DVRWLHAIFRTELAGDQGGGVTVSTLVGRYLFSKRTGRHKS
        DV WLHAIFR + AG  GGGVT S  V    F    GR  S
Subjt:  DVRWLHAIFRTELAGDQGGGVTVSTLVGRYLFSKRTGRHKS

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]1.3e-1858.65Show/hide
Query:  PRGNRSSLQTRKVAKTVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEEDDVRWLHAIFRTELAGDQ
        PRGNR +L T K+ KTVEIELPVPDTLPTSAESS+S+SSTW+E Y ESV++   +LF K S VRVA +V    E     +  DD+ WLHA+F  + AG  
Subjt:  PRGNRSSLQTRKVAKTVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEEDDVRWLHAIFRTELAGDQ

Query:  GGGV
        GGGV
Subjt:  GGGV

KAA0067117.1 hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa]8.0e-1650.82Show/hide
Query:  PRGNRSSLQTRKVAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED
        PRGNRSSLQT ++ KT                 VEIELPVPDTLPTSAES  S+SSTW+E Y E V++   +LF K S VR A +V    E     +  D
Subjt:  PRGNRSSLQTRKVAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED

Query:  DVRWLHAIFRTELAGDQGGGVT
        DV WLH +FR ++AG  GGGVT
Subjt:  DVRWLHAIFRTELAGDQGGGVT

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]1.5e-1456.6Show/hide
Query:  MVGKLIQFPTTFMKNSEAKKDLKPRGNRSSLQTRKVAKTVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKL-SYVRVAPHVQRFHEVQ
        MV KLIQ+PTTFM       ++ PRGNR S QT K+ KTVEIELPVPDTLPTSAESS S+SSTW+E Y ESV+   V +F  L + V    H     + Q
Subjt:  MVGKLIQFPTTFMKNSEAKKDLKPRGNRSSLQTRKVAKTVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKL-SYVRVAPHVQRFHEVQ

Query:  RVSLEE
        + SLEE
Subjt:  RVSLEE

TYK25935.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-1647.52Show/hide
Query:  PRGNRSSLQTRKVAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED
        PRGNR  LQT ++ K                  VEIELP+PDTLPTSAESS S+SSTW+E Y ESV++   +LF K S  R A +V    E     +  D
Subjt:  PRGNRSSLQTRKVAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED

Query:  DVRWLHAIFRTELAGDQGGGVTVSTLVGRYLFSKRTGRHKS
        DV WLHAIFR + AG  GGGVT S  V    F    GR  S
Subjt:  DVRWLHAIFRTELAGDQGGGVTVSTLVGRYLFSKRTGRHKS

TrEMBL top hitse value%identityAlignment
A0A5A7T9P7 Gag/pol protein1.3e-1647.52Show/hide
Query:  PRGNRSSLQTRKVAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED
        PRGNR  LQT ++ K                  VEIELP+PDTLPTSAESS S+SSTW+E Y ESV++   +LF K S  R A +V    E     +  D
Subjt:  PRGNRSSLQTRKVAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED

Query:  DVRWLHAIFRTELAGDQGGGVTVSTLVGRYLFSKRTGRHKS
        DV WLHAIFR + AG  GGGVT S  V    F    GR  S
Subjt:  DVRWLHAIFRTELAGDQGGGVTVSTLVGRYLFSKRTGRHKS

A0A5A7UAH6 CCHC-type domain-containing protein6.4e-1958.65Show/hide
Query:  PRGNRSSLQTRKVAKTVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEEDDVRWLHAIFRTELAGDQ
        PRGNR +L T K+ KTVEIELPVPDTLPTSAESS+S+SSTW+E Y ESV++   +LF K S VRVA +V    E     +  DD+ WLHA+F  + AG  
Subjt:  PRGNRSSLQTRKVAKTVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEEDDVRWLHAIFRTELAGDQ

Query:  GGGV
        GGGV
Subjt:  GGGV

A0A5A7VIY9 Uncharacterized protein3.9e-1650.82Show/hide
Query:  PRGNRSSLQTRKVAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED
        PRGNRSSLQT ++ KT                 VEIELPVPDTLPTSAES  S+SSTW+E Y E V++   +LF K S VR A +V    E     +  D
Subjt:  PRGNRSSLQTRKVAKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED

Query:  DVRWLHAIFRTELAGDQGGGVT
        DV WLH +FR ++AG  GGGVT
Subjt:  DVRWLHAIFRTELAGDQGGGVT

A0A5D3BET3 Uncharacterized protein7.3e-1556.6Show/hide
Query:  MVGKLIQFPTTFMKNSEAKKDLKPRGNRSSLQTRKVAKTVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKL-SYVRVAPHVQRFHEVQ
        MV KLIQ+PTTFM       ++ PRGNR S QT K+ KTVEIELPVPDTLPTSAESS S+SSTW+E Y ESV+   V +F  L + V    H     + Q
Subjt:  MVGKLIQFPTTFMKNSEAKKDLKPRGNRSSLQTRKVAKTVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKL-SYVRVAPHVQRFHEVQ

Query:  RVSLEE
        + SLEE
Subjt:  RVSLEE

A0A5D3DR18 Gag/pol protein1.3e-1647.52Show/hide
Query:  PRGNRSSLQTRKVAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED
        PRGNR  LQT ++ K                  VEIELP+PDTLPTSAESS S+SSTW+E Y ESV++   +LF K S  R A +V    E     +  D
Subjt:  PRGNRSSLQTRKVAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEED

Query:  DVRWLHAIFRTELAGDQGGGVTVSTLVGRYLFSKRTGRHKS
        DV WLHAIFR + AG  GGGVT S  V    F    GR  S
Subjt:  DVRWLHAIFRTELAGDQGGGVTVSTLVGRYLFSKRTGRHKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAAAGCTTATTCAATTCCCTACAACTTTCATGAAGAATTCAGAAGCCAAAAAAGACTTGAAGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGAAAGTAGC
TAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCGAGCTCTAGTACGTGGGTGGAGTTTTATATTGAGTCTGTCTATA
TTGTAAATGTTTTGTTATTTTCCAAACTGAGTTATGTCAGAGTTGCACCCCATGTTCAACGTTTTCATGAGGTTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGG
CTTCATGCCATCTTTCGGACTGAGCTAGCAGGTGATCAAGGAGGTGGTGTGACAGTCTCGACGCTTGTTGGGCGATATTTATTTAGCAAGCGTACGGGTCGTCATAAAAG
CCTAATGACAAGGACTCTCTTGTCGGTCTCCTCCTATCTCATACCTTTCAATAAAGAATCTTCTTTCGGTTTCCTCTTTATTTACTTAGCATGGCTTTACGACCCTTCAA
TACAACCTCTAACGCTATTTATCTTATCCCGTGTCACTCGGGATGACCAAGGCAACTTGGCCTTAATCTTGAGTGGATTATGGACTCCTGTCCATGAGGCATTATCCTTT
GATTTGTACGGGCCCTACCCTCTTTATGGCACGAGAGGGATTTCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTGGAGGAGCACTGGTCCATTAGGTCCCACCGG
TAGCTCACTAGGGGCGTTGAGAGGCCTTTTCTCCCAAGAAATTCCAACAGATTTACCTTGGTCCCACAAGCAATCAACGATTTTCCCTGTGAGGATACCGATGCTACTGC
GTGGTCCATTAGGTCCCACTGGTAGCTCACTAAGGGCGTTGAGGATCTCTCTCCCTCTTGGTATCGTGAAGCTCTCTCTCTCTCTCAATAGACTCACTGTGTTTTTCCTC
TCAAGAAAACAAGGAACAAAATATTCTCAAGACCTTAGAGATTTTTCTTTTGCTCCCACAAGCTCCCAACGCGCAATCCCTTACGAGGATACCGGTGTGAACAAGTGGTG
GTGTTCGTGGCAAATTTCCAGCGAGATCAAGGACCTCTTGCTGCTATTTTTTAGAGCAATTCAGAGAAAAATTGGCAAATCGATCAAGAATTTTCGCTTACGGGCCCCTG
TGTTTTGGGCAATTATTCATAAATTTGGAGTCTGTAAGTCCGGGTCTAGTTTAGGCCTGAAGATCTGTGAAGAACACGATAAAATTCGAGGCCAATTAGAAGAGGACAGT
CGCTGTTTTGCCCAGAAAACTGCTCCAGACGCAAATCGCGTCAGCATCGGGCGCTGTTCCTTAAGCGTCTCGACGCTGTCACGATTTCGTGCGATATTTCGTTCTTTACG
TGGAGACGTGGGAAGAAACCCTAATTGCTGGTTCGGTTCGCGTGAATGGGTTGAGCTGGGACCGGTTTGGTCCGGTTCAACCCGTTTTTGGTTCGGTTCTGGTTCTTCGA
GGTCGATTCGAAGCGGTTCGGGTCGGTTCATGCTTGCTGGTCCAGTTTTGGAACTGCAGATTCTTGTTATGAAGCATGATCATGCATTATGTCCATTAGGTCCCACTGGT
AGCTCACTAAGGGCGTTGAGCGAGATCAAGGACGTCTTGCTGCTGTTTTTTAGAGCAATCCGGAGAAAAATTGGCAAATCGATCAAGAATTTTCGCTTACGGTGTAGCGT
CGCGACGCTACGTCACAGCGTCGCGACGCTACCCAATTTCTTGATTCTTCTTGCGCAGCTACCAAGCGTCGAGACGCTTCGGCCTAGCGTCACGACGCTAGGCCCTGGTC
TTCTAGAATGGCCCAATTTTGACTCAATTTTTGGGCCTCCAACTTTCTTTTGGCCCAAATGCTTCTTGCAGTATCGTGACACCTCGTCTATGTCTCATGAAGAGGTAGTT
AACGTTATTACTAATTTTCAGCGACATGAGACAGAGGATGAGCCACCGTATTATTATTACGAGCCTCCTAGTTTAGAGGGAGCATTTCTAGTGGACAACGATGCTGAGCC
TGATTTTTATTTGCCATTCGAAGATCATATCTGTGAGATTGAGGAAGCATCTGAGTTCGAAAGTGAGGAATTCCAGACATTGAGATTAGAGTCTATGAAATTGCAACCAT
TGAATCCTATACCTCTATTATACGCTTGCTTGAGGACTAGCAAGATTCAGGATTTCGAGCACAAGAGGATAATTAGGCCAATTTTTCAATTGGGCGCTAATTCGAGAGTT
TTAGGACGTTTTCGGGCTAATTTGGAGTTCCCGAGATTACATGAAGCTAAAGGACGTGATTGGAGCGTTCCAGCCTCGAGATCGGAGCCAAAAGGACCAAAAGAGCATTC
AAATTGTGTATTCCGAGAGCTGGCATCGAGACCTGGCCTTGGCGTCTTGACGTCAGCACGAAAATGCGTGGAAGACAAATTGCCTAGTGTCTCAACGCTACTTATGGCAT
CTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAAAGCTTATTCAATTCCCTACAACTTTCATGAAGAATTCAGAAGCCAAAAAAGACTTGAAGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGAAAGTAGC
TAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCGAGCTCTAGTACGTGGGTGGAGTTTTATATTGAGTCTGTCTATA
TTGTAAATGTTTTGTTATTTTCCAAACTGAGTTATGTCAGAGTTGCACCCCATGTTCAACGTTTTCATGAGGTTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGG
CTTCATGCCATCTTTCGGACTGAGCTAGCAGGTGATCAAGGAGGTGGTGTGACAGTCTCGACGCTTGTTGGGCGATATTTATTTAGCAAGCGTACGGGTCGTCATAAAAG
CCTAATGACAAGGACTCTCTTGTCGGTCTCCTCCTATCTCATACCTTTCAATAAAGAATCTTCTTTCGGTTTCCTCTTTATTTACTTAGCATGGCTTTACGACCCTTCAA
TACAACCTCTAACGCTATTTATCTTATCCCGTGTCACTCGGGATGACCAAGGCAACTTGGCCTTAATCTTGAGTGGATTATGGACTCCTGTCCATGAGGCATTATCCTTT
GATTTGTACGGGCCCTACCCTCTTTATGGCACGAGAGGGATTTCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTGGAGGAGCACTGGTCCATTAGGTCCCACCGG
TAGCTCACTAGGGGCGTTGAGAGGCCTTTTCTCCCAAGAAATTCCAACAGATTTACCTTGGTCCCACAAGCAATCAACGATTTTCCCTGTGAGGATACCGATGCTACTGC
GTGGTCCATTAGGTCCCACTGGTAGCTCACTAAGGGCGTTGAGGATCTCTCTCCCTCTTGGTATCGTGAAGCTCTCTCTCTCTCTCAATAGACTCACTGTGTTTTTCCTC
TCAAGAAAACAAGGAACAAAATATTCTCAAGACCTTAGAGATTTTTCTTTTGCTCCCACAAGCTCCCAACGCGCAATCCCTTACGAGGATACCGGTGTGAACAAGTGGTG
GTGTTCGTGGCAAATTTCCAGCGAGATCAAGGACCTCTTGCTGCTATTTTTTAGAGCAATTCAGAGAAAAATTGGCAAATCGATCAAGAATTTTCGCTTACGGGCCCCTG
TGTTTTGGGCAATTATTCATAAATTTGGAGTCTGTAAGTCCGGGTCTAGTTTAGGCCTGAAGATCTGTGAAGAACACGATAAAATTCGAGGCCAATTAGAAGAGGACAGT
CGCTGTTTTGCCCAGAAAACTGCTCCAGACGCAAATCGCGTCAGCATCGGGCGCTGTTCCTTAAGCGTCTCGACGCTGTCACGATTTCGTGCGATATTTCGTTCTTTACG
TGGAGACGTGGGAAGAAACCCTAATTGCTGGTTCGGTTCGCGTGAATGGGTTGAGCTGGGACCGGTTTGGTCCGGTTCAACCCGTTTTTGGTTCGGTTCTGGTTCTTCGA
GGTCGATTCGAAGCGGTTCGGGTCGGTTCATGCTTGCTGGTCCAGTTTTGGAACTGCAGATTCTTGTTATGAAGCATGATCATGCATTATGTCCATTAGGTCCCACTGGT
AGCTCACTAAGGGCGTTGAGCGAGATCAAGGACGTCTTGCTGCTGTTTTTTAGAGCAATCCGGAGAAAAATTGGCAAATCGATCAAGAATTTTCGCTTACGGTGTAGCGT
CGCGACGCTACGTCACAGCGTCGCGACGCTACCCAATTTCTTGATTCTTCTTGCGCAGCTACCAAGCGTCGAGACGCTTCGGCCTAGCGTCACGACGCTAGGCCCTGGTC
TTCTAGAATGGCCCAATTTTGACTCAATTTTTGGGCCTCCAACTTTCTTTTGGCCCAAATGCTTCTTGCAGTATCGTGACACCTCGTCTATGTCTCATGAAGAGGTAGTT
AACGTTATTACTAATTTTCAGCGACATGAGACAGAGGATGAGCCACCGTATTATTATTACGAGCCTCCTAGTTTAGAGGGAGCATTTCTAGTGGACAACGATGCTGAGCC
TGATTTTTATTTGCCATTCGAAGATCATATCTGTGAGATTGAGGAAGCATCTGAGTTCGAAAGTGAGGAATTCCAGACATTGAGATTAGAGTCTATGAAATTGCAACCAT
TGAATCCTATACCTCTATTATACGCTTGCTTGAGGACTAGCAAGATTCAGGATTTCGAGCACAAGAGGATAATTAGGCCAATTTTTCAATTGGGCGCTAATTCGAGAGTT
TTAGGACGTTTTCGGGCTAATTTGGAGTTCCCGAGATTACATGAAGCTAAAGGACGTGATTGGAGCGTTCCAGCCTCGAGATCGGAGCCAAAAGGACCAAAAGAGCATTC
AAATTGTGTATTCCGAGAGCTGGCATCGAGACCTGGCCTTGGCGTCTTGACGTCAGCACGAAAATGCGTGGAAGACAAATTGCCTAGTGTCTCAACGCTACTTATGGCAT
CTTGA
Protein sequenceShow/hide protein sequence
MVGKLIQFPTTFMKNSEAKKDLKPRGNRSSLQTRKVAKTVEIELPVPDTLPTSAESSRSSSSTWVEFYIESVYIVNVLLFSKLSYVRVAPHVQRFHEVQRVSLEEDDVRW
LHAIFRTELAGDQGGGVTVSTLVGRYLFSKRTGRHKSLMTRTLLSVSSYLIPFNKESSFGFLFIYLAWLYDPSIQPLTLFILSRVTRDDQGNLALILSGLWTPVHEALSF
DLYGPYPLYGTRGISVCWLDLKQVVHWRSTGPLGPTGSSLGALRGLFSQEIPTDLPWSHKQSTIFPVRIPMLLRGPLGPTGSSLRALRISLPLGIVKLSLSLNRLTVFFL
SRKQGTKYSQDLRDFSFAPTSSQRAIPYEDTGVNKWWCSWQISSEIKDLLLLFFRAIQRKIGKSIKNFRLRAPVFWAIIHKFGVCKSGSSLGLKICEEHDKIRGQLEEDS
RCFAQKTAPDANRVSIGRCSLSVSTLSRFRAIFRSLRGDVGRNPNCWFGSREWVELGPVWSGSTRFWFGSGSSRSIRSGSGRFMLAGPVLELQILVMKHDHALCPLGPTG
SSLRALSEIKDVLLLFFRAIRRKIGKSIKNFRLRCSVATLRHSVATLPNFLILLAQLPSVETLRPSVTTLGPGLLEWPNFDSIFGPPTFFWPKCFLQYRDTSSMSHEEVV
NVITNFQRHETEDEPPYYYYEPPSLEGAFLVDNDAEPDFYLPFEDHICEIEEASEFESEEFQTLRLESMKLQPLNPIPLLYACLRTSKIQDFEHKRIIRPIFQLGANSRV
LGRFRANLEFPRLHEAKGRDWSVPASRSEPKGPKEHSNCVFRELASRPGLGVLTSARKCVEDKLPSVSTLLMAS