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Lag0011422 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011422
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGirdin-like
Genome locationchr1:24359373..24362177
RNA-Seq ExpressionLag0011422
SyntenyLag0011422
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]4.8e-2228.78Show/hide
Query:  CAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS------------
        C PLLYIW+ SH+K P EF+CP + FSS WN ++N ISEF  + W  + P + AW +FF++L  E+VIW+A WM  + +IY+CGD  S            
Subjt:  CAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS------------

Query:  ---------------------------------------QAARKK--------------------------ECDELRKAKSSLVQENERLQLEVKQGLLR
                                               QA R+K                          +  EL +    L QENE+L+ E  Q +  
Subjt:  ---------------------------------------QAARKK--------------------------ECDELRKAKSSLVQENERLQLEVKQGLLR

Query:  IVELEKELNRLKGSVSKQEQLEKEISALDTEARDLNRRMHRLRKDNDE-----GVHITHAEEIEDQKHLRH
           L+ EL + K  +  Q++LE ++  LD E R +N+    ++ +        G+H+  AE  E+ K L++
Subjt:  IVELEKELNRLKGSVSKQEQLEKEISALDTEARDLNRRMHRLRKDNDE-----GVHITHAEEIEDQKHLRH

XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]1.8e-2958.16Show/hide
Query:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS
        +++G+G FIGCA LLYIW+LSH+ CPPEFKCP++KFS SW++LQN + EF Q+ WS   P +  W  FF+ L+ EDV WRA WMST+PM+Y+CG   S
Subjt:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS

XP_022150759.1 uncharacterized protein LOC111018820 [Momordica charantia]5.7e-3160.2Show/hide
Query:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS
        +++G+G FIGCA LLYIW+LSH+ CPPEFKCP++KFS SW++LQNPI EF Q+ WS   P +  W  FF+ L+ EDV WRA WMST+PM+Y+CG   S
Subjt:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS

XP_031739496.1 uncharacterized protein LOC116403043 [Cucumis sativus]4.4e-2350Show/hide
Query:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS
        + KG G    C PLLYIW+ SH+K P EF+CP+++FSS WN ++N ISEF  + W+ + P++  W +FFS L  EDVIW+A WM  + +IY+CGD  S
Subjt:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS

XP_031740432.1 uncharacterized protein LOC116403430 [Cucumis sativus]4.4e-2350Show/hide
Query:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS
        + KG G    C PLLYIW+ SH+K P EF+CP+++FSS WN ++N ISEF  + W+ + P++  W +FFS L  EDVIW+A WM  + +IY+CGD  S
Subjt:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein2.3e-2228.78Show/hide
Query:  CAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS------------
        C PLLYIW+ SH+K P EF+CP + FSS WN ++N ISEF  + W  + P + AW +FF++L  E+VIW+A WM  + +IY+CGD  S            
Subjt:  CAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS------------

Query:  ---------------------------------------QAARKK--------------------------ECDELRKAKSSLVQENERLQLEVKQGLLR
                                               QA R+K                          +  EL +    L QENE+L+ E  Q +  
Subjt:  ---------------------------------------QAARKK--------------------------ECDELRKAKSSLVQENERLQLEVKQGLLR

Query:  IVELEKELNRLKGSVSKQEQLEKEISALDTEARDLNRRMHRLRKDNDE-----GVHITHAEEIEDQKHLRH
           L+ EL + K  +  Q++LE ++  LD E R +N+    ++ +        G+H+  AE  E+ K L++
Subjt:  IVELEKELNRLKGSVSKQEQLEKEISALDTEARDLNRRMHRLRKDNDE-----GVHITHAEEIEDQKHLRH

A0A5A7T5S7 Girdin-like9.8e-2126.62Show/hide
Query:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS--
        + KG G    C PLLYIW+ SH+K P EF+CP + FSS WN ++N ISEF  + W  + P + AW +FF++L  E+VIW+A WM  + +IY+CGD  S  
Subjt:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS--

Query:  ----------------------------------------------------------------------------QAARKK------------------
                                                                                    QA R+K                  
Subjt:  ----------------------------------------------------------------------------QAARKK------------------

Query:  --------ECDELRKAKSSLVQENERLQLEVKQGLLRIVELEKELNRLKGSVSKQEQLEKEISALDTEARDLNRRMHRLRKDNDE-----GVHITHAEEI
                +  EL +    L QENE+L+ E  Q +     L+ EL + K  +  Q++LEK++  LD E R +N+    L+ +        G+H+  AE  
Subjt:  --------ECDELRKAKSSLVQENERLQLEVKQGLLRIVELEKELNRLKGSVSKQEQLEKEISALDTEARDLNRRMHRLRKDNDE-----GVHITHAEEI

Query:  EDQKHLRH
        E+ + L++
Subjt:  EDQKHLRH

A0A5A7T6E2 Girdin-like3.1e-2230.74Show/hide
Query:  CAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGD---------------
        C PLLYIW+ SH+K P EF+CP + FSS WN ++N ISEF  + W  + P + AW +FF++L  E+VIW+A WM  + +IY+CGD               
Subjt:  CAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGD---------------

Query:  ------------------------------------TRSQAARKKECD------------ELRKAKSSLVQENERLQLEVKQGLLRIVELEKELNRLKGS
                                              S   R KE              EL +    L QENE+L+ E  Q +     L+ +L + K  
Subjt:  ------------------------------------TRSQAARKKECD------------ELRKAKSSLVQENERLQLEVKQGLLRIVELEKELNRLKGS

Query:  VSKQEQLEKEISALDTEARDLNRRMHRLRKD
        +  Q++LEK++  LD E R +N+    L+ +
Subjt:  VSKQEQLEKEISALDTEARDLNRRMHRLRKD

A0A6J1CZG4 uncharacterized protein LOC1110162018.9e-3058.16Show/hide
Query:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS
        +++G+G FIGCA LLYIW+LSH+ CPPEFKCP++KFS SW++LQN + EF Q+ WS   P +  W  FF+ L+ EDV WRA WMST+PM+Y+CG   S
Subjt:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS

A0A6J1DB13 uncharacterized protein LOC1110188202.8e-3160.2Show/hide
Query:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS
        +++G+G FIGCA LLYIW+LSH+ CPPEFKCP++KFS SW++LQNPI EF Q+ WS   P +  W  FF+ L+ EDV WRA WMST+PM+Y+CG   S
Subjt:  KTKGIGGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCTACAGAGGCCGTCAATTTCACGAAACCTCGAGGTCGTCAGTTTCACAAACCTCGACTTAGACTTCTCCTTCTTCGCTGAACAGCCACCGCGAACAACTCCTAC
ATCGCCGCACACTGAAGAGCACACCGCCACCGGAGGTTCGTCGCAATTGTCGTGGACTCGCTGGAGAAGCTGCGTCGTCGTCGGACTCCTCTGCAACCACTTCCTGCTGC
CGCTTTGGGTGTTGTCGCCGGAAGAAGAAGGGAAAACGAAAGGGGGGGCTGCTTGTCGGCTGAAGAGGGAGAAGAAGAATGGGATGAAGACAAACAAAACAAAAGGAATA
GGAGGATTTATAGGGTGTGCACCATTATTGTACATTTGGGTCCTTAGTCATGTGAAGTGTCCACCAGAATTCAAATGTCCAGAGATCAAATTTTCAAGTTCCTGGAATAA
GCTGCAAAATCCCATTTCAGAGTTCGTGCAATCAGGTTGGAGTTCATCCTCTCCTGAAAGGAGCGCTTGGGAAGCCTTTTTCTCCGAACTAAAGGTAGAAGATGTAATAT
GGAGAGCCCCTTGGATGTCAACTAGGCCAATGATCTATAAATGTGGTGATACCAGATCACAAGCAGCACGCAAAAAGGAATGTGATGAATTGAGAAAAGCGAAATCATCA
TTGGTTCAAGAAAATGAAAGGTTGCAATTGGAGGTAAAGCAAGGTTTGTTGCGCATTGTTGAACTAGAAAAAGAGTTGAACCGATTAAAGGGCAGTGTCAGCAAACAAGA
ACAGTTAGAAAAGGAAATTTCAGCATTAGACACAGAGGCCCGCGACCTGAACAGAAGAATGCATCGATTAAGAAAGGATAATGATGAAGGTGTTCATATAACACATGCGG
AAGAAATTGAAGATCAAAAGCACTTAAGACATTCAATTTTACTCCTAAAGCATGCATGTTCTAGAAAGGGTAGAAAAGAGAGTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCTACAGAGGCCGTCAATTTCACGAAACCTCGAGGTCGTCAGTTTCACAAACCTCGACTTAGACTTCTCCTTCTTCGCTGAACAGCCACCGCGAACAACTCCTAC
ATCGCCGCACACTGAAGAGCACACCGCCACCGGAGGTTCGTCGCAATTGTCGTGGACTCGCTGGAGAAGCTGCGTCGTCGTCGGACTCCTCTGCAACCACTTCCTGCTGC
CGCTTTGGGTGTTGTCGCCGGAAGAAGAAGGGAAAACGAAAGGGGGGGCTGCTTGTCGGCTGAAGAGGGAGAAGAAGAATGGGATGAAGACAAACAAAACAAAAGGAATA
GGAGGATTTATAGGGTGTGCACCATTATTGTACATTTGGGTCCTTAGTCATGTGAAGTGTCCACCAGAATTCAAATGTCCAGAGATCAAATTTTCAAGTTCCTGGAATAA
GCTGCAAAATCCCATTTCAGAGTTCGTGCAATCAGGTTGGAGTTCATCCTCTCCTGAAAGGAGCGCTTGGGAAGCCTTTTTCTCCGAACTAAAGGTAGAAGATGTAATAT
GGAGAGCCCCTTGGATGTCAACTAGGCCAATGATCTATAAATGTGGTGATACCAGATCACAAGCAGCACGCAAAAAGGAATGTGATGAATTGAGAAAAGCGAAATCATCA
TTGGTTCAAGAAAATGAAAGGTTGCAATTGGAGGTAAAGCAAGGTTTGTTGCGCATTGTTGAACTAGAAAAAGAGTTGAACCGATTAAAGGGCAGTGTCAGCAAACAAGA
ACAGTTAGAAAAGGAAATTTCAGCATTAGACACAGAGGCCCGCGACCTGAACAGAAGAATGCATCGATTAAGAAAGGATAATGATGAAGGTGTTCATATAACACATGCGG
AAGAAATTGAAGATCAAAAGCACTTAAGACATTCAATTTTACTCCTAAAGCATGCATGTTCTAGAAAGGGTAGAAAAGAGAGTAAATGA
Protein sequenceShow/hide protein sequence
MSLQRPSISRNLEVVSFTNLDLDFSFFAEQPPRTTPTSPHTEEHTATGGSSQLSWTRWRSCVVVGLLCNHFLLPLWVLSPEEEGKTKGGAACRLKREKKNGMKTNKTKGI
GGFIGCAPLLYIWVLSHVKCPPEFKCPEIKFSSSWNKLQNPISEFVQSGWSSSSPERSAWEAFFSELKVEDVIWRAPWMSTRPMIYKCGDTRSQAARKKECDELRKAKSS
LVQENERLQLEVKQGLLRIVELEKELNRLKGSVSKQEQLEKEISALDTEARDLNRRMHRLRKDNDEGVHITHAEEIEDQKHLRHSILLLKHACSRKGRKESK