; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011434 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011434
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr1:24668844..24670425
RNA-Seq ExpressionLag0011434
SyntenyLag0011434
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004518 - nuclease activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR005162 - Retrotransposon gag domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]3.1e-14369.67Show/hide
Query:  STGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERGPVPREEISRPERAGPSDPEKMYGIERLKKLGATVFEGSIDPVDA
        S  +VRGDDVCWLHA+FR K AGGPGGGV     S+    +     D  + +     +P+ EI RPE+AGPSD EKMYGIERLKKLGATVFEGS DP DA
Subjt:  STGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERGPVPREEISRPERAGPSDPEKMYGIERLKKLGATVFEGSIDPVDA

Query:  E-----------------------------KEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFA
        E                             KEAEGWWKSIIARR+DARTLDWQTFRGIFEEKYYPTTY EAKRDEFLELKQ S+S+A+YERKYTELSR+A
Subjt:  E-----------------------------KEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFA

Query:  EVIVESESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQM
        E+IV SESDRC RFE GLRFEIRTPVTA AKW NF QLVETAL V+QSI+EEK+A+E S G  TTSG RGREQR FTPGVNVSG QDFKRRSG + LRQM
Subjt:  EVIVESESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQM

Query:  SSGSAYQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG
        SSGSAYQRQS+RA +Q A+SVAR RTGQESVASES+RTPCVSCGK+H G+C++GAGVCYQCG+ GHFKRDCPQLRV V+RDQG+ESHTVEQ R+    G
Subjt:  SSGSAYQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.8e-15075Show/hide
Query:  FNVSVGSTGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEKMYG
        FNVSVGST +VRGD+VCWLHAVF  K AGGPGGGVMPPRTSRRRRQNQD  QDPTQ + ERG   PR              +EI R ERA PSDPEKMYG
Subjt:  FNVSVGSTGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEKMYG

Query:  IERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVESES
        IERLK+LGATVF GS D  DAE      W       +DARTLDWQTFRGIFEEKYYPTT  EAKRDEFLELKQGS+S+A+Y+RKYTELS +AEVI+ SES
Subjt:  IERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVESES

Query:  DRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSAYQR
        DRCRRFE GL FEIRTPVTA AKWT+F QL+ETAL VEQSI+EEK+A+E S G  TTS  RGREQR  TPGVN+SG QDFKRR G + LRQMSSGSAYQR
Subjt:  DRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSAYQR

Query:  QSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLA
        QSQRA +Q  +SVARPRTGQESVASESRRTPCVSC K+H GQCLVGAGVCYQCGQ GHFKRDCPQLRV VQRDQG+ESHTVEQPR+LA
Subjt:  QSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLA

KAA0056353.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.7e-13770.05Show/hide
Query:  NVSVGSTGVVRGDDVCWLHAVFRTKLAG----GPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEK
        N S GS G+VRGDDVCWLH VFR K  G    G G  VMPPRTS+R RQNQDGTQDPTQ + ERG   PR              +EI RPE+AGPSDPEK
Subjt:  NVSVGSTGVVRGDDVCWLHAVFRTKLAG----GPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEK

Query:  MYGIERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVE
        MYGIERLKKL ATVF+GS D  DAE      W      R+DARTLDWQTFRGIFEEKYYPTTY EAKRDEFLELKQ S+S+ EYERKY      AE+IV 
Subjt:  MYGIERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVE

Query:  SESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSA
         ESDRC R E GLRFE RTPVTA  KW +F QLVETAL VEQSI+EEK+ +E S G  TTSG RGREQR FTPGVNVS  QDFKRRSG + LRQMSSGSA
Subjt:  SESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSA

Query:  YQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG
        YQRQSQRA +QSA+SVAR RTGQ+SVASESRRTPCV+CGK H GQCL+G GV YQCGQ GH KRDCPQLRV V+RDQG+ESHT+EQPR+   VG
Subjt:  YQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG

TYJ96574.1 uncharacterized protein E5676_scaffold791G00040 [Cucumis melo var. makuwa]2.2e-14974.03Show/hide
Query:  GSTGVVRGDDVCWLHAVFRTKLAGGPGGG--------VMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEK
        GS  +VRGDDV WLHAVFR K  GGPGGG        VMPPRTSR+RRQNQD  QDPTQ + +RG   PR              +EI RPE+AGPSDP+K
Subjt:  GSTGVVRGDDVCWLHAVFRTKLAGGPGGG--------VMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEK

Query:  MYGIERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVE
        MY IERLKKL ATVFE S DP DAEKEAEGWWKSII R +DA  LDW TFRGIFEEKYYPTTY EAKRDEFLELKQGS+S+AEYERKYTELSR+ E+IV 
Subjt:  MYGIERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVE

Query:  SESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSA
        SES RCRRFE GLRFEIRTPVTA AKW +F QLVE AL VEQSI+EEK+A++ S G  TTSG RGREQR FT GVNVSG QDFKRRSG + LRQMS GS 
Subjt:  SESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSA

Query:  YQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVE
        YQRQS +A +QSA+SVAR RTGQES+ASESRRTPCVSCGK H GQCL+GAGVCYQCGQ GHFKR+CPQLRVA QRDQG+ESHTVE
Subjt:  YQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVE

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]3.1e-14369.67Show/hide
Query:  STGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERGPVPREEISRPERAGPSDPEKMYGIERLKKLGATVFEGSIDPVDA
        S  +VRGDDVCWLHA+FR K AGGPGGGV     S+    +     D  + +     +P+ EI RPE+AGPSD EKMYGIERLKKLGATVFEGS DP DA
Subjt:  STGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERGPVPREEISRPERAGPSDPEKMYGIERLKKLGATVFEGSIDPVDA

Query:  E-----------------------------KEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFA
        E                             KEAEGWWKSIIARR+DARTLDWQTFRGIFEEKYYPTTY EAKRDEFLELKQ S+S+A+YERKYTELSR+A
Subjt:  E-----------------------------KEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFA

Query:  EVIVESESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQM
        E+IV SESDRC RFE GLRFEIRTPVTA AKW NF QLVETAL V+QSI+EEK+A+E S G  TTSG RGREQR FTPGVNVSG QDFKRRSG + LRQM
Subjt:  EVIVESESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQM

Query:  SSGSAYQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG
        SSGSAYQRQS+RA +Q A+SVAR RTGQESVASES+RTPCVSCGK+H G+C++GAGVCYQCG+ GHFKRDCPQLRV V+RDQG+ESHTVEQ R+    G
Subjt:  SSGSAYQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG

TrEMBL top hitse value%identityAlignment
A0A5A7T7M6 Reverse transcriptase1.5e-14369.67Show/hide
Query:  STGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERGPVPREEISRPERAGPSDPEKMYGIERLKKLGATVFEGSIDPVDA
        S  +VRGDDVCWLHA+FR K AGGPGGGV     S+    +     D  + +     +P+ EI RPE+AGPSD EKMYGIERLKKLGATVFEGS DP DA
Subjt:  STGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERGPVPREEISRPERAGPSDPEKMYGIERLKKLGATVFEGSIDPVDA

Query:  E-----------------------------KEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFA
        E                             KEAEGWWKSIIARR+DARTLDWQTFRGIFEEKYYPTTY EAKRDEFLELKQ S+S+A+YERKYTELSR+A
Subjt:  E-----------------------------KEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFA

Query:  EVIVESESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQM
        E+IV SESDRC RFE GLRFEIRTPVTA AKW NF QLVETAL V+QSI+EEK+A+E S G  TTSG RGREQR FTPGVNVSG QDFKRRSG + LRQM
Subjt:  EVIVESESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQM

Query:  SSGSAYQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG
        SSGSAYQRQS+RA +Q A+SVAR RTGQESVASES+RTPCVSCGK+H G+C++GAGVCYQCG+ GHFKRDCPQLRV V+RDQG+ESHTVEQ R+    G
Subjt:  SSGSAYQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG

A0A5A7U9X4 DNA/RNA polymerases superfamily protein2.8e-15075Show/hide
Query:  FNVSVGSTGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEKMYG
        FNVSVGST +VRGD+VCWLHAVF  K AGGPGGGVMPPRTSRRRRQNQD  QDPTQ + ERG   PR              +EI R ERA PSDPEKMYG
Subjt:  FNVSVGSTGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEKMYG

Query:  IERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVESES
        IERLK+LGATVF GS D  DAE      W       +DARTLDWQTFRGIFEEKYYPTT  EAKRDEFLELKQGS+S+A+Y+RKYTELS +AEVI+ SES
Subjt:  IERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVESES

Query:  DRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSAYQR
        DRCRRFE GL FEIRTPVTA AKWT+F QL+ETAL VEQSI+EEK+A+E S G  TTS  RGREQR  TPGVN+SG QDFKRR G + LRQMSSGSAYQR
Subjt:  DRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSAYQR

Query:  QSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLA
        QSQRA +Q  +SVARPRTGQESVASESRRTPCVSC K+H GQCLVGAGVCYQCGQ GHFKRDCPQLRV VQRDQG+ESHTVEQPR+LA
Subjt:  QSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLA

A0A5A7UKD3 DNA/RNA polymerases superfamily protein4.7e-13770.05Show/hide
Query:  NVSVGSTGVVRGDDVCWLHAVFRTKLAG----GPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEK
        N S GS G+VRGDDVCWLH VFR K  G    G G  VMPPRTS+R RQNQDGTQDPTQ + ERG   PR              +EI RPE+AGPSDPEK
Subjt:  NVSVGSTGVVRGDDVCWLHAVFRTKLAG----GPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEK

Query:  MYGIERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVE
        MYGIERLKKL ATVF+GS D  DAE      W      R+DARTLDWQTFRGIFEEKYYPTTY EAKRDEFLELKQ S+S+ EYERKY      AE+IV 
Subjt:  MYGIERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVE

Query:  SESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSA
         ESDRC R E GLRFE RTPVTA  KW +F QLVETAL VEQSI+EEK+ +E S G  TTSG RGREQR FTPGVNVS  QDFKRRSG + LRQMSSGSA
Subjt:  SESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSA

Query:  YQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG
        YQRQSQRA +QSA+SVAR RTGQ+SVASESRRTPCV+CGK H GQCL+G GV YQCGQ GH KRDCPQLRV V+RDQG+ESHT+EQPR+   VG
Subjt:  YQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG

A0A5D3BC77 CCHC-type domain-containing protein1.1e-14974.03Show/hide
Query:  GSTGVVRGDDVCWLHAVFRTKLAGGPGGG--------VMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEK
        GS  +VRGDDV WLHAVFR K  GGPGGG        VMPPRTSR+RRQNQD  QDPTQ + +RG   PR              +EI RPE+AGPSDP+K
Subjt:  GSTGVVRGDDVCWLHAVFRTKLAGGPGGG--------VMPPRTSRRRRQNQDGTQDPTQSKPERG-PVPR--------------EEISRPERAGPSDPEK

Query:  MYGIERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVE
        MY IERLKKL ATVFE S DP DAEKEAEGWWKSII R +DA  LDW TFRGIFEEKYYPTTY EAKRDEFLELKQGS+S+AEYERKYTELSR+ E+IV 
Subjt:  MYGIERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVE

Query:  SESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSA
        SES RCRRFE GLRFEIRTPVTA AKW +F QLVE AL VEQSI+EEK+A++ S G  TTSG RGREQR FT GVNVSG QDFKRRSG + LRQMS GS 
Subjt:  SESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSA

Query:  YQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVE
        YQRQS +A +QSA+SVAR RTGQES+ASESRRTPCVSCGK H GQCL+GAGVCYQCGQ GHFKR+CPQLRVA QRDQG+ESHTVE
Subjt:  YQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVE

A0A5D3BTP3 Reverse transcriptase1.5e-14369.67Show/hide
Query:  STGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERGPVPREEISRPERAGPSDPEKMYGIERLKKLGATVFEGSIDPVDA
        S  +VRGDDVCWLHA+FR K AGGPGGGV     S+    +     D  + +     +P+ EI RPE+AGPSD EKMYGIERLKKLGATVFEGS DP DA
Subjt:  STGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERGPVPREEISRPERAGPSDPEKMYGIERLKKLGATVFEGSIDPVDA

Query:  E-----------------------------KEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFA
        E                             KEAEGWWKSIIARR+DARTLDWQTFRGIFEEKYYPTTY EAKRDEFLELKQ S+S+A+YERKYTELSR+A
Subjt:  E-----------------------------KEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFA

Query:  EVIVESESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQM
        E+IV SESDRC RFE GLRFEIRTPVTA AKW NF QLVETAL V+QSI+EEK+A+E S G  TTSG RGREQR FTPGVNVSG QDFKRRSG + LRQM
Subjt:  EVIVESESDRCRRFESGLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQM

Query:  SSGSAYQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG
        SSGSAYQRQS+RA +Q A+SVAR RTGQESVASES+RTPCVSCGK+H G+C++GAGVCYQCG+ GHFKRDCPQLRV V+RDQG+ESHTVEQ R+    G
Subjt:  SSGSAYQRQSQRAPNQSASSVARPRTGQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACGGGTTTTCAGGGATTACGCTGCGTTGTGTTTCCCGTAGAATACCTGATATCCAAGATTAGTATGTTTATCAGGTTTAACGTTTCAGTAGGGTCAACAGGGGT
CGTTAGAGGAGATGATGTCTGTTGGCTTCACGCCGTCTTTCGGACTAAGCTAGCAGGTGGTCCGGGAGGGGGAGTCATGCCACCACGTACCAGCAGACGACGCAGGCAGA
ATCAGGACGGGACGCAGGATCCTACCCAAAGTAAACCTGAAAGGGGACCAGTACCCCGAGAGGAGATCAGTAGGCCAGAGAGAGCAGGGCCTAGTGATCCGGAAAAGATG
TATGGGATTGAACGATTGAAGAAGTTAGGAGCCACAGTGTTTGAGGGTTCCATAGATCCAGTTGACGCCGAGAAGGAGGCGGAGGGATGGTGGAAGTCCATTATAGCCAG
GCGCAGTGATGCACGTACGTTAGATTGGCAGACATTTAGAGGCATATTCGAGGAAAAGTACTATCCCACCACATATTATGAGGCAAAGAGAGATGAGTTTCTGGAGCTGA
AACAAGGGTCAGTTTCAATGGCCGAGTACGAGAGAAAGTATACCGAGCTTTCACGGTTTGCTGAAGTGATTGTGGAATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGT
GGGTTGCGTTTTGAGATACGTACCCCAGTTACCGCTAATGCCAAGTGGACGAATTTTTTCCAGCTAGTAGAGACTGCCTTAAGTGTGGAGCAGAGTATTATAGAGGAAAA
GGCAGCATTGGAACCTAGTCATGGAGCTCCAACAACTAGTGGTTCCCGAGGTCGTGAGCAGCGGAGTTTCACACCTGGAGTGAATGTTTCAGGTCGTCAAGACTTCAAGC
GCCGATCTGGTGCCCAGTTGTTGAGGCAGATGAGTTCGGGTAGTGCTTATCAGAGGCAGAGTCAGAGAGCCCCCAATCAGTCTGCGAGTTCAGTAGCAAGACCACGGACA
GGTCAGGAGTCCGTTGCTAGTGAATCCAGGAGAACCCCATGTGTAAGTTGTGGCAAGAATCATCCGGGTCAGTGTCTTGTTGGTGCCGGTGTGTGTTACCAGTGTGGACA
ACCAGGGCATTTTAAGAGGGATTGTCCACAGCTGAGAGTAGCAGTTCAGAGGGACCAGGGAATTGAGTCCCACACAGTTGAGCAGCCGAGAGTCTTAGCGGGCGTAGGAT
AA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACGGGTTTTCAGGGATTACGCTGCGTTGTGTTTCCCGTAGAATACCTGATATCCAAGATTAGTATGTTTATCAGGTTTAACGTTTCAGTAGGGTCAACAGGGGT
CGTTAGAGGAGATGATGTCTGTTGGCTTCACGCCGTCTTTCGGACTAAGCTAGCAGGTGGTCCGGGAGGGGGAGTCATGCCACCACGTACCAGCAGACGACGCAGGCAGA
ATCAGGACGGGACGCAGGATCCTACCCAAAGTAAACCTGAAAGGGGACCAGTACCCCGAGAGGAGATCAGTAGGCCAGAGAGAGCAGGGCCTAGTGATCCGGAAAAGATG
TATGGGATTGAACGATTGAAGAAGTTAGGAGCCACAGTGTTTGAGGGTTCCATAGATCCAGTTGACGCCGAGAAGGAGGCGGAGGGATGGTGGAAGTCCATTATAGCCAG
GCGCAGTGATGCACGTACGTTAGATTGGCAGACATTTAGAGGCATATTCGAGGAAAAGTACTATCCCACCACATATTATGAGGCAAAGAGAGATGAGTTTCTGGAGCTGA
AACAAGGGTCAGTTTCAATGGCCGAGTACGAGAGAAAGTATACCGAGCTTTCACGGTTTGCTGAAGTGATTGTGGAATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGT
GGGTTGCGTTTTGAGATACGTACCCCAGTTACCGCTAATGCCAAGTGGACGAATTTTTTCCAGCTAGTAGAGACTGCCTTAAGTGTGGAGCAGAGTATTATAGAGGAAAA
GGCAGCATTGGAACCTAGTCATGGAGCTCCAACAACTAGTGGTTCCCGAGGTCGTGAGCAGCGGAGTTTCACACCTGGAGTGAATGTTTCAGGTCGTCAAGACTTCAAGC
GCCGATCTGGTGCCCAGTTGTTGAGGCAGATGAGTTCGGGTAGTGCTTATCAGAGGCAGAGTCAGAGAGCCCCCAATCAGTCTGCGAGTTCAGTAGCAAGACCACGGACA
GGTCAGGAGTCCGTTGCTAGTGAATCCAGGAGAACCCCATGTGTAAGTTGTGGCAAGAATCATCCGGGTCAGTGTCTTGTTGGTGCCGGTGTGTGTTACCAGTGTGGACA
ACCAGGGCATTTTAAGAGGGATTGTCCACAGCTGAGAGTAGCAGTTCAGAGGGACCAGGGAATTGAGTCCCACACAGTTGAGCAGCCGAGAGTCTTAGCGGGCGTAGGAT
AA
Protein sequenceShow/hide protein sequence
MSTGFQGLRCVVFPVEYLISKISMFIRFNVSVGSTGVVRGDDVCWLHAVFRTKLAGGPGGGVMPPRTSRRRRQNQDGTQDPTQSKPERGPVPREEISRPERAGPSDPEKM
YGIERLKKLGATVFEGSIDPVDAEKEAEGWWKSIIARRSDARTLDWQTFRGIFEEKYYPTTYYEAKRDEFLELKQGSVSMAEYERKYTELSRFAEVIVESESDRCRRFES
GLRFEIRTPVTANAKWTNFFQLVETALSVEQSIIEEKAALEPSHGAPTTSGSRGREQRSFTPGVNVSGRQDFKRRSGAQLLRQMSSGSAYQRQSQRAPNQSASSVARPRT
GQESVASESRRTPCVSCGKNHPGQCLVGAGVCYQCGQPGHFKRDCPQLRVAVQRDQGIESHTVEQPRVLAGVG