; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011444 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011444
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:24862023..24862792
RNA-Seq ExpressionLag0011444
SyntenyLag0011444
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG51459.1 hypothetical protein EZV62_023983 [Acer yangbiense]4.6e-1633.33Show/hide
Query:  LIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQAMEFKMENGWKESLRVRVQLDI
        L+GK+L+ + ++ E  +   +  W+    + +E +GLN+F+F    + E+ R+ Q+ PW FDK +++L KP   V     E K  + W + ++V+VQ+DI
Subjt:  LIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQAMEFKMENGWKESLRVRVQLDI

Query:  SKPLRQGIKVKLDEPLGSCWSPIRYEKLPELC
        SKPL++ +++KLD+        ++YE+LP+ C
Subjt:  SKPLRQGIKVKLDEPLGSCWSPIRYEKLPELC

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]8.9e-2833.97Show/hide
Query:  AFEDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPW
        A  +L+E W+ F LT+EE++  VD+D  A   TG+ L  SLI KLL+ R IS  V++   K AW +     +V+ +G N+FLF      ++ R+L+  PW
Subjt:  AFEDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPW

Query:  LFDKYILMLSKPIPMVKSQAMEFK---------------------------------MENG-----WKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWS
         FD+ ++++  P+ + K   M+F+                                 +E+      W   LRVRV+ D+ KPL +GIK+ LD P+G CW 
Subjt:  LFDKYILMLSKPIPMVKSQAMEFK---------------------------------MENG-----WKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWS

Query:  PIRYEKLPE
        PI+YE+LP+
Subjt:  PIRYEKLPE

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]2.6e-1929.81Show/hide
Query:  EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD
        +++ + WE F  T +E ET V +DR   ++T  ++   ++ KL   + IS E +R   K+ W + N    E LG+N+++   ++  E++RVL   PW F+
Subjt:  EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD

Query:  KYILMLSKPIPMVKSQAMEFKM-------------------------------------ENGWK-ESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR
        K +L+L+ P    +   M F                                        +GW    +RVRV++D+SKPLR+GIK+K  +     W P+R
Subjt:  KYILMLSKPIPMVKSQAMEFKM-------------------------------------ENGWK-ESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR

Query:  YEKLPELC
        YEKLP+ C
Subjt:  YEKLPELC

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.7e-3438.57Show/hide
Query:  EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD
        E+L+ +W+KF LT+EE+E  +DVD  A  +  + L +SL+GKLLA R+IS +V+ +    AW + + LTVE +G NLFLF    E +  RV++  PW FD
Subjt:  EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD

Query:  KYILMLSKPIPMVKSQAMEFKM------------------------------------ENG--WKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR
        K +++L KP        +EF                                      E G  W  SLR+RV +DI+KPLR+GIK+ +D P+G CW PI+
Subjt:  KYILMLSKPIPMVKSQAMEFKM------------------------------------ENG--WKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR

Query:  YEKLPELCSF
        YE+LP+ C F
Subjt:  YEKLPELCSF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]8.6e-3135.58Show/hide
Query:  DLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD
        DL+E W+ F LT+EEEET +DVD  A   TG  L   L+GKL   R I+  VM+   + AW +  N   V+ LG NLFLF+     ++ ++ +  PW FD
Subjt:  DLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD

Query:  KYILMLSKPIPMVKSQAMEF--------------------------------------KMENGWKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR
        + +++++KP+ ++    ++F                                       +   W  +LRVRV LDISKPLR+GIK+ LD P+G  W PI+
Subjt:  KYILMLSKPIPMVKSQAMEF--------------------------------------KMENGWKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR

Query:  YEKLPELC
        YE+LP+ C
Subjt:  YEKLPELC

TrEMBL top hitse value%identityAlignment
A0A2N9IG44 CCHC-type domain-containing protein5.6e-2034.64Show/hide
Query:  AFEDLIENWEKFNLTAEEE---ETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQK
        A + L+E+W KF+LT  E    + E DV  ++  +  +     L+GKL+  ++ S EV++      W    G+T   +  NLF F    E E+ RVL   
Subjt:  AFEDLIENWEKFNLTAEEE---ETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQK

Query:  PWLFDKYILMLSK---PIPMVKSQAMEFKMEN-GWKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIRYEKLPELC
        PWLFD Y+L L +    IP +K + ++      GW  +LRVR+QLD ++P+ +G  +     LG  W   RYE+LP +C
Subjt:  PWLFDKYILMLSK---PIPMVKSQAMEFKMEN-GWKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIRYEKLPELC

A0A6J1BSZ1 uncharacterized protein LOC1110054814.3e-2833.97Show/hide
Query:  AFEDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPW
        A  +L+E W+ F LT+EE++  VD+D  A   TG+ L  SLI KLL+ R IS  V++   K AW +     +V+ +G N+FLF      ++ R+L+  PW
Subjt:  AFEDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPW

Query:  LFDKYILMLSKPIPMVKSQAMEFK---------------------------------MENG-----WKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWS
         FD+ ++++  P+ + K   M+F+                                 +E+      W   LRVRV+ D+ KPL +GIK+ LD P+G CW 
Subjt:  LFDKYILMLSKPIPMVKSQAMEFK---------------------------------MENG-----WKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWS

Query:  PIRYEKLPE
        PI+YE+LP+
Subjt:  PIRYEKLPE

A0A6J1D765 uncharacterized protein LOC1110179021.3e-1929.81Show/hide
Query:  EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD
        +++ + WE F  T +E ET V +DR   ++T  ++   ++ KL   + IS E +R   K+ W + N    E LG+N+++   ++  E++RVL   PW F+
Subjt:  EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD

Query:  KYILMLSKPIPMVKSQAMEFKM-------------------------------------ENGWK-ESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR
        K +L+L+ P    +   M F                                        +GW    +RVRV++D+SKPLR+GIK+K  +     W P+R
Subjt:  KYILMLSKPIPMVKSQAMEFKM-------------------------------------ENGWK-ESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR

Query:  YEKLPELC
        YEKLP+ C
Subjt:  YEKLPELC

A0A6J1DU55 uncharacterized protein LOC1110231351.8e-3438.57Show/hide
Query:  EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD
        E+L+ +W+KF LT+EE+E  +DVD  A  +  + L +SL+GKLLA R+IS +V+ +    AW + + LTVE +G NLFLF    E +  RV++  PW FD
Subjt:  EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD

Query:  KYILMLSKPIPMVKSQAMEFKM------------------------------------ENG--WKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR
        K +++L KP        +EF                                      E G  W  SLR+RV +DI+KPLR+GIK+ +D P+G CW PI+
Subjt:  KYILMLSKPIPMVKSQAMEFKM------------------------------------ENG--WKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR

Query:  YEKLPELCSF
        YE+LP+ C F
Subjt:  YEKLPELCSF

A0A6J1DX30 uncharacterized protein LOC1110248744.2e-3135.58Show/hide
Query:  DLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD
        DL+E W+ F LT+EEEET +DVD  A   TG  L   L+GKL   R I+  VM+   + AW +  N   V+ LG NLFLF+     ++ ++ +  PW FD
Subjt:  DLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFD

Query:  KYILMLSKPIPMVKSQAMEF--------------------------------------KMENGWKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR
        + +++++KP+ ++    ++F                                       +   W  +LRVRV LDISKPLR+GIK+ LD P+G  W PI+
Subjt:  KYILMLSKPIPMVKSQAMEF--------------------------------------KMENGWKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIR

Query:  YEKLPELC
        YE+LP+ C
Subjt:  YEKLPELC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGCTAGAGTTCTTAAATTCAATCTGTAGTGCTCGTATCCTTTCAATCCATAGTTCTGGTTTCTCATGTAAATTCTTCCTATTGTCGCCATCTTGTCTGCAAAT
CTGTGTTGCCTTCCTTCCAACAGCTTTCGAGGACTTGATAGAAAATTGGGAGAAATTTAACCTTACGGCTGAAGAAGAGGAAACGGAAGTGGATGTTGATCGTCAAGCTG
CAGTCGTTACGGGTAGATCCTTGGGCTTTAGTCTCATTGGTAAGCTCCTTGCGCCTAGGGTCATATCTGGTGAGGTAATGAGAAAGAATTTCAAGGCTGCCTGGAACATC
CCAAATGGATTGACTGTCGAAAAGCTTGGACTCAATTTGTTCCTATTTACGCTGCGAACGGAGGAGGAGCAAACCAGAGTTTTACAGCAAAAACCGTGGTTGTTTGACAA
GTATATTTTGATGCTATCCAAACCAATCCCCATGGTGAAGTCCCAAGCAATGGAGTTCAAAATGGAGAATGGCTGGAAGGAGAGTCTCCGTGTACGTGTTCAATTGGATA
TTTCAAAGCCACTTCGACAAGGCATCAAAGTAAAGCTTGACGAACCTCTGGGTAGTTGCTGGTCCCCGATTCGGTATGAAAAGCTCCCGGAATTATGCTCCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGCTAGAGTTCTTAAATTCAATCTGTAGTGCTCGTATCCTTTCAATCCATAGTTCTGGTTTCTCATGTAAATTCTTCCTATTGTCGCCATCTTGTCTGCAAAT
CTGTGTTGCCTTCCTTCCAACAGCTTTCGAGGACTTGATAGAAAATTGGGAGAAATTTAACCTTACGGCTGAAGAAGAGGAAACGGAAGTGGATGTTGATCGTCAAGCTG
CAGTCGTTACGGGTAGATCCTTGGGCTTTAGTCTCATTGGTAAGCTCCTTGCGCCTAGGGTCATATCTGGTGAGGTAATGAGAAAGAATTTCAAGGCTGCCTGGAACATC
CCAAATGGATTGACTGTCGAAAAGCTTGGACTCAATTTGTTCCTATTTACGCTGCGAACGGAGGAGGAGCAAACCAGAGTTTTACAGCAAAAACCGTGGTTGTTTGACAA
GTATATTTTGATGCTATCCAAACCAATCCCCATGGTGAAGTCCCAAGCAATGGAGTTCAAAATGGAGAATGGCTGGAAGGAGAGTCTCCGTGTACGTGTTCAATTGGATA
TTTCAAAGCCACTTCGACAAGGCATCAAAGTAAAGCTTGACGAACCTCTGGGTAGTTGCTGGTCCCCGATTCGGTATGAAAAGCTCCCGGAATTATGCTCCTTCTGA
Protein sequenceShow/hide protein sequence
MDLLEFLNSICSARILSIHSSGFSCKFFLLSPSCLQICVAFLPTAFEDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNI
PNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQAMEFKMENGWKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIRYEKLPELCSF