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Lag0011455 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011455
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionultraviolet-B receptor UVR8 isoform X1
Genome locationchr1:25176066..25176887
RNA-Seq ExpressionLag0011455
SyntenyLag0011455
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154912.1 ultraviolet-B receptor UVR8 isoform X1 [Momordica charantia]1.6e-1385.71Show/hide
Query:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
        MLSRR   EFIIGFNSE WRR SR LSSNSGKRF AVWGNGDFGRLGLG
Subjt:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
XP_022154913.1 ultraviolet-B receptor UVR8 isoform X2 [Momordica charantia]1.6e-1385.71Show/hide
Query:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
        MLSRR   EFIIGFNSE WRR SR LSSNSGKRF AVWGNGDFGRLGLG
Subjt:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
XP_038883567.1 ultraviolet-B receptor UVR8 isoform X1 [Benincasa hispida]1.8e-1282Show/hide
Query:  MLSRRHLTEFIIGFNSEIW-RRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
        ML+RR LTEFI GFNSE W RR +RWLSSNSGK F AVWGNGDFGRLGLG
Subjt:  MLSRRHLTEFIIGFNSEIW-RRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
XP_038883568.1 ultraviolet-B receptor UVR8 isoform X2 [Benincasa hispida]1.8e-1282Show/hide
Query:  MLSRRHLTEFIIGFNSEIW-RRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
        ML+RR LTEFI GFNSE W RR +RWLSSNSGK F AVWGNGDFGRLGLG
Subjt:  MLSRRHLTEFIIGFNSEIW-RRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
XP_038883569.1 ultraviolet-B receptor UVR8 isoform X3 [Benincasa hispida]1.8e-1282Show/hide
Query:  MLSRRHLTEFIIGFNSEIW-RRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
        ML+RR LTEFI GFNSE W RR +RWLSSNSGK F AVWGNGDFGRLGLG
Subjt:  MLSRRHLTEFIIGFNSEIW-RRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
TrEMBL top hitse value%identityAlignment
A0A5D3BW43 Ultraviolet-B receptor UVR8 isoform X12.5e-1280Show/hide
Query:  MLSRRHLTEFIIGFNSEIW-RRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
        ML+RR LTEF+IGFNSE W RR +RW SS+SGKRF AVWGNGDFGRLGLG
Subjt:  MLSRRHLTEFIIGFNSEIW-RRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
A0A6J1DLK8 ultraviolet-B receptor UVR8 isoform X27.8e-1485.71Show/hide
Query:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
        MLSRR   EFIIGFNSE WRR SR LSSNSGKRF AVWGNGDFGRLGLG
Subjt:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
A0A6J1DMZ3 ultraviolet-B receptor UVR8 isoform X17.8e-1485.71Show/hide
Query:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
        MLSRR   EFIIGFNSE WRR SR LSSNSGKRF AVWGNGDFGRLGLG
Subjt:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
A0A6J1HMP4 ultraviolet-B receptor UVR8 isoform X29.6e-1281.63Show/hide
Query:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
        ML+RR L E IIGFNSE  RR SR LSSNSGKRF AVWGNGDFGRLGLG
Subjt:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
A0A6J1HRS2 PH, RCC1 and FYVE domains-containing protein 1 isoform X39.6e-1281.63Show/hide
Query:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
        ML+RR L E IIGFNSE  RR SR LSSNSGKRF AVWGNGDFGRLGLG
Subjt:  MLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIAVWGNGDFGRLGLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G08710.1 Regulator of chromosome condensation (RCC1) family protein7.0e-0777.78Show/hide
Query:  SRWLSSNSGKRFIAVWGNGDFGRLGLG
        SRW+SS SGKRF A+WG+GD+GRLGLG
Subjt:  SRWLSSNSGKRFIAVWGNGDFGRLGLG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACTAAACGGATCCCTACAGCGGAAGACGTAGCACAATTCCTTACCACCGATCAAAACCGATTTCTTAAGTCCCAATCTTCTTCACCGCAGAGGCTCAATCTGAA
ATTCCCGAAATCCGAAAGCAAAATCAGAAAAGATCCATATGACTACCGGGCAGTTCATTTTGATCTTCACATTCAGCACAAATTGCTCACAGAAATCGATATAAGCAAAG
TTATGCTTAGCAGAAGGCATTTAACGGAGTTCATAATCGGTTTCAATTCGGAAATCTGGAGAAGAGGAAGTCGATGGTTGTCGAGCAATTCAGGGAAGAGGTTTATAGCG
GTTTGGGGAAATGGCGATTTCGGGAGGCTGGGGCTTGGAAAATGGTTCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCACTAAACGGATCCCTACAGCGGAAGACGTAGCACAATTCCTTACCACCGATCAAAACCGATTTCTTAAGTCCCAATCTTCTTCACCGCAGAGGCTCAATCTGAA
ATTCCCGAAATCCGAAAGCAAAATCAGAAAAGATCCATATGACTACCGGGCAGTTCATTTTGATCTTCACATTCAGCACAAATTGCTCACAGAAATCGATATAAGCAAAG
TTATGCTTAGCAGAAGGCATTTAACGGAGTTCATAATCGGTTTCAATTCGGAAATCTGGAGAAGAGGAAGTCGATGGTTGTCGAGCAATTCAGGGAAGAGGTTTATAGCG
GTTTGGGGAAATGGCGATTTCGGGAGGCTGGGGCTTGGAAAATGGTTCTTTTGA
Protein sequenceShow/hide protein sequence
MITKRIPTAEDVAQFLTTDQNRFLKSQSSSPQRLNLKFPKSESKIRKDPYDYRAVHFDLHIQHKLLTEIDISKVMLSRRHLTEFIIGFNSEIWRRGSRWLSSNSGKRFIA
VWGNGDFGRLGLGKWFF