; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011458 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011458
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:25279305..25279901
RNA-Seq ExpressionLag0011458
SyntenyLag0011458
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]2.1e-4453.76Show/hide
Query:  GPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKPS
        GP    S RKRKA  REAR       +Y  ++A     +EF+E EAT +  PHNDALV+TL +AN K+HRIL+DG SS D+ SLTA+KAM LG E+LK S
Subjt:  GPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKPS

Query:  LTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT
        LTPL+GFGGER+ P+G IE  + F     ++T++++FLVVD   +YN IL RPT+H ++AI ST+HQ +KFPT
Subjt:  LTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]1.1e-4553.33Show/hide
Query:  GEVDQRWPRQTRTPREIRTIFGGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESS
        GE D + P      REIRTI GGP      RKRKA  RE R       IY   +AK    +EF+E EAT +  PHND LV+TL +AN K+HRIL+DG SS
Subjt:  GEVDQRWPRQTRTPREIRTIFGGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESS

Query:  ADVLSLTAFKAMQLGRELLKPSLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT
        AD++SLTA+KAM LG    K S   LV F GERV PEG  E +V FG G  ++T I++FLV+D   +YNAILGRPT+H +KAI ST+HQ + FPT
Subjt:  ADVLSLTAFKAMQLGRELLKPSLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.3e-4657.23Show/hide
Query:  GPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKPS
        GP    S RKRKA  REAR   +   +Y  ++      +EF+E EAT +  PHNDALV+TL +ANVK+HRIL+DG SSAD++S TA+KAM LG ++LK S
Subjt:  GPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKPS

Query:  LTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT
          PLVGFGGERV  EG IE  V FG G  +VTK+++FLVV+   +YNAILGRPT+H +KAI ST+HQ  KFPT
Subjt:  LTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]3.0e-4653.59Show/hide
Query:  REIRTIFGGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQL
        +EI+TIFGGP      +KRKA  +EAR  P Y  +Y          ++F+E E T +  PHNDALV+TL + N K+HRIL+DG SS  ++SLTA+KAM L
Subjt:  REIRTIFGGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQL

Query:  GRELLKPSLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT
        G + LK +L PLVGFGGERV  +  I+  V FG+G   +TKI+ FLVVD   +YNAILGRPT+H +KAI ST+H+ LKFPT
Subjt:  GRELLKPSLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]1.1e-4556.32Show/hide
Query:  GGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKP
        GGP    S RKRKA  REAR       +Y  ++A     +EF+E EAT +  PHNDALV+TL +ANVK+HRIL+DG SSAD++S T +K M LG ++LK 
Subjt:  GGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKP

Query:  SLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT
        S  PL+GFG ERV PEG IE  V FG G  +VTK+++FLVVD   +YNAILGR T+H +KAI ST+HQ +KFPT
Subjt:  SLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159011.0e-4453.76Show/hide
Query:  GPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKPS
        GP    S RKRKA  REAR       +Y  ++A     +EF+E EAT +  PHNDALV+TL +AN K+HRIL+DG SS D+ SLTA+KAM LG E+LK S
Subjt:  GPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKPS

Query:  LTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT
        LTPL+GFGGER+ P+G IE  + F     ++T++++FLVVD   +YN IL RPT+H ++AI ST+HQ +KFPT
Subjt:  LTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT

A0A6J1D8C9 uncharacterized protein LOC1110183005.4e-4653.33Show/hide
Query:  GEVDQRWPRQTRTPREIRTIFGGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESS
        GE D + P      REIRTI GGP      RKRKA  RE R       IY   +AK    +EF+E EAT +  PHND LV+TL +AN K+HRIL+DG SS
Subjt:  GEVDQRWPRQTRTPREIRTIFGGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESS

Query:  ADVLSLTAFKAMQLGRELLKPSLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT
        AD++SLTA+KAM LG    K S   LV F GERV PEG  E +V FG G  ++T I++FLV+D   +YNAILGRPT+H +KAI ST+HQ + FPT
Subjt:  ADVLSLTAFKAMQLGRELLKPSLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT

A0A6J1DQY2 uncharacterized protein LOC1110223211.1e-4657.23Show/hide
Query:  GPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKPS
        GP    S RKRKA  REAR   +   +Y  ++      +EF+E EAT +  PHNDALV+TL +ANVK+HRIL+DG SSAD++S TA+KAM LG ++LK S
Subjt:  GPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKPS

Query:  LTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT
          PLVGFGGERV  EG IE  V FG G  +VTK+++FLVV+   +YNAILGRPT+H +KAI ST+HQ  KFPT
Subjt:  LTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT

A0A6J1DV51 uncharacterized protein LOC1110246621.4e-4653.59Show/hide
Query:  REIRTIFGGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQL
        +EI+TIFGGP      +KRKA  +EAR  P Y  +Y          ++F+E E T +  PHNDALV+TL + N K+HRIL+DG SS  ++SLTA+KAM L
Subjt:  REIRTIFGGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQL

Query:  GRELLKPSLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT
        G + LK +L PLVGFGGERV  +  I+  V FG+G   +TKI+ FLVVD   +YNAILGRPT+H +KAI ST+H+ LKFPT
Subjt:  GRELLKPSLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT

A0A6J1DXV4 uncharacterized protein LOC1110251475.4e-4656.32Show/hide
Query:  GGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKP
        GGP    S RKRKA  REAR       +Y  ++A     +EF+E EAT +  PHNDALV+TL +ANVK+HRIL+DG SSAD++S T +K M LG ++LK 
Subjt:  GGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLTAFKAMQLGRELLKP

Query:  SLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT
        S  PL+GFG ERV PEG IE  V FG G  +VTK+++FLVVD   +YNAILGR T+H +KAI ST+HQ +KFPT
Subjt:  SLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGGGCGAGGTTGACCAAAGATGGCCGAGACAAACAAGAACCCCACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCAAGTAGGAAAAGGAA
AGCTATTGCCAGAGAAGCAAGGTTCGAACCAGAATATCGAGGTATATACTCTGTCCATCTAGCAAAGACACACCCCCCTTTGGAGTTCACTGAGGCCGAGGCAACAAGCA
TTCATCAGCCACATAATGATGCTCTGGTGGTCACTCTAATGGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGAAAGCTCGGCTGATGTCCTTTCTCTAACA
GCCTTTAAAGCAATGCAGTTAGGGAGAGAACTCTTAAAGCCAAGTCTTACCCCACTTGTAGGATTTGGAGGAGAAAGAGTGACCCCAGAGGGTAGCATAGAATTTTCAGT
GATCTTTGGGGATGGACAGAATACAGTAACCAAGATAATAAACTTCCTAGTCGTGGATTGTATGCCAGCCTACAATGCAATCCTAGGAAGGCCAACCTTGCATGAAATGA
AGGCCATAGCTTCAACTCACCATCAGTTGCTGAAGTTTCCAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGGGCGAGGTTGACCAAAGATGGCCGAGACAAACAAGAACCCCACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCAAGTAGGAAAAGGAA
AGCTATTGCCAGAGAAGCAAGGTTCGAACCAGAATATCGAGGTATATACTCTGTCCATCTAGCAAAGACACACCCCCCTTTGGAGTTCACTGAGGCCGAGGCAACAAGCA
TTCATCAGCCACATAATGATGCTCTGGTGGTCACTCTAATGGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGAAAGCTCGGCTGATGTCCTTTCTCTAACA
GCCTTTAAAGCAATGCAGTTAGGGAGAGAACTCTTAAAGCCAAGTCTTACCCCACTTGTAGGATTTGGAGGAGAAAGAGTGACCCCAGAGGGTAGCATAGAATTTTCAGT
GATCTTTGGGGATGGACAGAATACAGTAACCAAGATAATAAACTTCCTAGTCGTGGATTGTATGCCAGCCTACAATGCAATCCTAGGAAGGCCAACCTTGCATGAAATGA
AGGCCATAGCTTCAACTCACCATCAGTTGCTGAAGTTTCCAACTTAG
Protein sequenceShow/hide protein sequence
MAEGEVDQRWPRQTRTPREIRTIFGGPAGGGSSRKRKAIAREARFEPEYRGIYSVHLAKTHPPLEFTEAEATSIHQPHNDALVVTLMVANVKIHRILIDGESSADVLSLT
AFKAMQLGRELLKPSLTPLVGFGGERVTPEGSIEFSVIFGDGQNTVTKIINFLVVDCMPAYNAILGRPTLHEMKAIASTHHQLLKFPT