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Lag0011460 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011460
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description4-hydroxy-tetrahydrodipicolinate synthase
Genome locationchr1:25439869..25440231
RNA-Seq ExpressionLag0011460
SyntenyLag0011460
Gene Ontology termsGO:0009089 - lysine biosynthetic process via diaminopimelate (biological process)
GO:0019877 - diaminopimelate biosynthetic process (biological process)
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase (molecular function)
InterPro domainsIPR002220 - DapA-like
IPR013785 - Aldolase-type TIM barrel


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582569.1 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.4e-2084.13Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RTSADDIKSL LVTAIKTPYLPDGRFD+EAYDALVNR IENGA+ VIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

KAG7018953.1 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]8.4e-2084.13Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RTSADDIKSL LVTAIKTPYLPDGRFD+EAYDALVNR IENGA+ VIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

XP_022980330.1 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Cucurbita maxima]8.4e-2084.13Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RTSADDIKSL LVTAIKTPYLPDGRFD+EAYDALVNR IENGA+ VIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

XP_023528690.1 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]8.4e-2084.13Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RTSADDIKSL LVTAIKTPYLPDGRFD+EAYDALVNR IENGA+ VIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

XP_038898920.1 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Benincasa hispida]2.9e-2085.71Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RTSADDIKSL LVTAIKTPYLPDGRFD+EAYDALVNR IENGA GVIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

TrEMBL top hitse value%identityAlignment
A0A1S3AWB5 4-hydroxy-tetrahydrodipicolinate synthase6.9e-2084.13Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RT ADDIKSL LVTAIKTPYLPDGRFD+EAYDALVNR IENGA GVIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

A0A5A7U5X2 4-hydroxy-tetrahydrodipicolinate synthase6.9e-2084.13Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RT ADDIKSL LVTAIKTPYLPDGRFD+EAYDALVNR IENGA GVIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

A0A6J1CZ39 4-hydroxy-tetrahydrodipicolinate synthase5.3e-2084.13Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RTSADDIKSL LVTAIKTPYLPDGRFD+EAYDALVN  IENGA+GVIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

A0A6J1E8W7 4-hydroxy-tetrahydrodipicolinate synthase4.1e-2084.13Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RTSADDIKSL LVTAIKTPYLPDGRFD+EAYDALVNR IENGA+ VIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

A0A6J1IVZ1 4-hydroxy-tetrahydrodipicolinate synthase4.1e-2084.13Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RTSADDIKSL LVTAIKTPYLPDGRFD+EAYDALVNR IENGA+ VIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

SwissProt top hitse value%identityAlignment
P26259 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic5.6e-1969.84Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RTS DDI  L L+TA+KTPYLPDGRFD+EAYD+L+N  IE GA+GVIVGGTTGEG   +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

Q39535 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic1.5e-1971.43Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RTS DDI SL L+TA+KTPYLPDGRFD+EAYD+L+N  IE GA+GVIVGGTTGEG   +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

Q42948 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic6.0e-2177.78Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RT ADDIK+L L+TAIKTPYLPDGRFD+EAYD LVN  IENGA+GVIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

Q9FVC8 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic8.7e-2073.02Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RT+ DDIK+L ++TAIKTPYLPDGRFD+EAYD LVN  I+NGA+GVIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

Q9LZX6 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic5.1e-2073.02Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RT+ DDI+SL ++TAIKTPYLPDGRFD++AYD LVN  IENGA+GVIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

Arabidopsis top hitse value%identityAlignment
AT2G45440.1 dihydrodipicolinate synthase6.2e-2173.02Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RT+ DDIK+L ++TAIKTPYLPDGRFD+EAYD LVN  I+NGA+GVIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

AT3G60880.1 dihydrodipicolinate synthase 13.6e-2173.02Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RT+ DDI+SL ++TAIKTPYLPDGRFD++AYD LVN  IENGA+GVIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY

AT3G60880.2 dihydrodipicolinate synthase 13.6e-2173.02Show/hide
Query:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY
        RT+ DDI+SL ++TAIKTPYLPDGRFD++AYD LVN  IENGA+GVIVGGTTGEGQ  +WD +
Subjt:  RTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQ-HNWDAY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACAGAAGTTTCTGGACAATCATTGATGAGCTTAATTCCTCCAACTCTTATTTGCAGGACATCAGCAGATGATATCAAGTCTCTTACACTTGTAACTGCCATTAA
AACACCATATCTTCCCGATGGTAGATTTGATATAGAAGCTTATGATGCCTTGGTGAACCGTCATATTGAAAATGGAGCTAAAGGTGTGATTGTGGGTGGCACAACTGGTG
AAGGTCAGCATAACTGGGATGCTTATTGGTCACACTGTCAACTGTTTTGGTGGATCAGTCAAGGTAATAGGCAACACAACATGCTTCTAAGTAGGGATTTGTCGTTGGAA
TGCATGCAGGGTGGGTTGTTGCTTCGATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAACAGAAGTTTCTGGACAATCATTGATGAGCTTAATTCCTCCAACTCTTATTTGCAGGACATCAGCAGATGATATCAAGTCTCTTACACTTGTAACTGCCATTAA
AACACCATATCTTCCCGATGGTAGATTTGATATAGAAGCTTATGATGCCTTGGTGAACCGTCATATTGAAAATGGAGCTAAAGGTGTGATTGTGGGTGGCACAACTGGTG
AAGGTCAGCATAACTGGGATGCTTATTGGTCACACTGTCAACTGTTTTGGTGGATCAGTCAAGGTAATAGGCAACACAACATGCTTCTAAGTAGGGATTTGTCGTTGGAA
TGCATGCAGGGTGGGTTGTTGCTTCGATATTAA
Protein sequenceShow/hide protein sequence
MRTEVSGQSLMSLIPPTLICRTSADDIKSLTLVTAIKTPYLPDGRFDIEAYDALVNRHIENGAKGVIVGGTTGEGQHNWDAYWSHCQLFWWISQGNRQHNMLLSRDLSLE
CMQGGLLLRY