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Lag0011461 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011461
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr1:25451035..25451559
RNA-Seq ExpressionLag0011461
SyntenyLag0011461
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035532.1 uncharacterized protein E6C27_scaffold285G001980 [Cucumis melo var. makuwa]6.0e-5163.07Show/hide
Query:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME
        MS+  P GK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+ RV+ LE      RTV   ++ERGDSSTGSVA +E
Subjt:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME

Query:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR
        ERV  LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQ P GGA+ +++VK+PEPKPFCG R
Subjt:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR

KAA0037573.1 reverse transcriptase [Cucumis melo var. makuwa]4.6e-5163.64Show/hide
Query:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME
        MS+  PLGK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+ RV+ LE      RTV   ++ERGDSSTGSVA +E
Subjt:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME

Query:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR
        ERV  LDSSQK  ++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQ P GGA+ +++VK+PEPKPFCG R
Subjt:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR

KAA0051251.1 uncharacterized protein E6C27_scaffold2143G00070 [Cucumis melo var. makuwa]2.7e-5163.74Show/hide
Query:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLENRTVKPSSFERGDSSTGSVAQMEERVDG
        MS+  PLGK   +RLVE+EEQMLYL EVP S+RFLESRLEEIA + D IDAVAGRV G+ IQEL+ RV+ LE    +  S ERGDSSTGSVA +EERV  
Subjt:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLENRTVKPSSFERGDSSTGSVAQMEERVDG

Query:  LDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR
        LDSSQK +++M+  +SE+ +A LDVVR E+AD++ARL+LTMRA+ NQ P GGA+ +++VK+PEPKPFCG R
Subjt:  LDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR

KAA0053339.1 reverse transcriptase [Cucumis melo var. makuwa]9.2e-5263.64Show/hide
Query:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME
        MS+  P GK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+ RV+ LE      RTV   ++ERGDSSTGSVA +E
Subjt:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME

Query:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR
        ERV  LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQ PTGGA+ +++VK+PEPKPFCG R
Subjt:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR

TYK03099.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-5163.64Show/hide
Query:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME
        MS+  PLGK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+ RV+ LE      RTV   ++ERGDSSTGSVA +E
Subjt:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME

Query:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR
        ERV  LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQ P GGA+ +++VK+PEPKPFCG R
Subjt:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR

TrEMBL top hitse value%identityAlignment
A0A5A7T3M3 Reverse transcriptase2.2e-5163.64Show/hide
Query:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME
        MS+  PLGK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+ RV+ LE      RTV   ++ERGDSSTGSVA +E
Subjt:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME

Query:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR
        ERV  LDSSQK  ++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQ P GGA+ +++VK+PEPKPFCG R
Subjt:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR

A0A5A7UCI7 Uncharacterized protein1.3e-5163.74Show/hide
Query:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLENRTVKPSSFERGDSSTGSVAQMEERVDG
        MS+  PLGK   +RLVE+EEQMLYL EVP S+RFLESRLEEIA + D IDAVAGRV G+ IQEL+ RV+ LE    +  S ERGDSSTGSVA +EERV  
Subjt:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLENRTVKPSSFERGDSSTGSVAQMEERVDG

Query:  LDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR
        LDSSQK +++M+  +SE+ +A LDVVR E+AD++ARL+LTMRA+ NQ P GGA+ +++VK+PEPKPFCG R
Subjt:  LDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR

A0A5A7UIP7 Reverse transcriptase4.5e-5263.64Show/hide
Query:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME
        MS+  P GK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+ RV+ LE      RTV   ++ERGDSSTGSVA +E
Subjt:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME

Query:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR
        ERV  LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQ PTGGA+ +++VK+PEPKPFCG R
Subjt:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR

A0A5D3BYE6 Reverse transcriptase5.8e-5263.64Show/hide
Query:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME
        MS+  PLGK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+ RV+ LE      RTV   ++ERGDSSTGSVA +E
Subjt:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME

Query:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR
        ERV  LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQ P GGA+ +++VK+PEPKPFCG R
Subjt:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR

A0A5D3C4R1 Reverse transcriptase2.9e-5163.07Show/hide
Query:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME
        MS+  P GK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+ RV+ LE      RTV   ++ERGDSSTGSVA +E
Subjt:  MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLE-----NRTVKPSSFERGDSSTGSVAQME

Query:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR
        ERV  LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQ P GGA+ +++VK+PEPKPFCG R
Subjt:  ERVDGLDSSQKAIVQMVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACAGTAAAACCGTTGGGCAAGACCCATGTGGAACGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTGAGGGAAGTCCCCGATTCGGTTCGCTTCCTAGAATC
TCGTCTTGAAGAGATTGCGACGAGGACAGATAAGATCGATGCGGTAGCTGGTCGCGTGGATGGAATTCCCATCCAAGAATTGATTATGAGGGTTGAAAACCTCGAGAACA
GAACTGTGAAACCTAGTAGCTTCGAGCGTGGGGACAGCTCGACGGGCTCTGTTGCCCAAATGGAGGAGCGTGTTGATGGTCTAGACAGCTCCCAGAAAGCAATAGTTCAG
ATGGTCACAGAACTGTCTGAAGATGTGAAAGCGGCCCTCGACGTCGTCAGAGCCGAAGTGGCGGATTTAAGCGCCAGACTAAACCTCACCATGAGAGCGGTGGGAAACCA
AACCCCGACAGGGGGTGCGGTCCAATTAAACAAAGTAAAAGTCCCTGAGCCGAAACCCTTCTGTGGGGTTCGATGCTCTACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACAGTAAAACCGTTGGGCAAGACCCATGTGGAACGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTGAGGGAAGTCCCCGATTCGGTTCGCTTCCTAGAATC
TCGTCTTGAAGAGATTGCGACGAGGACAGATAAGATCGATGCGGTAGCTGGTCGCGTGGATGGAATTCCCATCCAAGAATTGATTATGAGGGTTGAAAACCTCGAGAACA
GAACTGTGAAACCTAGTAGCTTCGAGCGTGGGGACAGCTCGACGGGCTCTGTTGCCCAAATGGAGGAGCGTGTTGATGGTCTAGACAGCTCCCAGAAAGCAATAGTTCAG
ATGGTCACAGAACTGTCTGAAGATGTGAAAGCGGCCCTCGACGTCGTCAGAGCCGAAGTGGCGGATTTAAGCGCCAGACTAAACCTCACCATGAGAGCGGTGGGAAACCA
AACCCCGACAGGGGGTGCGGTCCAATTAAACAAAGTAAAAGTCCCTGAGCCGAAACCCTTCTGTGGGGTTCGATGCTCTACCTGA
Protein sequenceShow/hide protein sequence
MSTVKPLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGIPIQELIMRVENLENRTVKPSSFERGDSSTGSVAQMEERVDGLDSSQKAIVQ
MVTELSEDVKAALDVVRAEVADLSARLNLTMRAVGNQTPTGGAVQLNKVKVPEPKPFCGVRCST