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Lag0011463 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011463
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr1:25524085..25525412
RNA-Seq ExpressionLag0011463
SyntenyLag0011463
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036760.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.2e-0732.87Show/hide
Query:  GLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSKASESDNKKSTNVQFSQNVDAAEAVVPTRTEVAEVVRGITIEI
        GLG++Y+ M+  I A+    SVQ++MSL LTQE+QIE                   S ++ S N +  N   +  + A             +V    + +
Subjt:  GLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSKASESDNKKSTNVQFSQNVDAAEAVVPTRTEVAEVVRGITIEI

Query:  EHNIPIGILTLGATNHLTHNFNNLSVEIEYGGGNQVHMGNGAD
        + N       LGATNHL HN +NLS   EYGGG+ ++  NG+D
Subjt:  EHNIPIGILTLGATNHLTHNFNNLSVEIEYGGGNQVHMGNGAD

KAA0045111.1 putative glutathione S-transferase isoform X1 [Cucumis melo var. makuwa]7.2e-0745Show/hide
Query:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSK
        V+   S +    + DHIL+I +GLG++Y+SM+  I A+    SVQ+VMSL LTQE+QIESK++  ++ SLP+V++  H++
Subjt:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSK

KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.1e-1030.63Show/hide
Query:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHS--KASES-----DNKKSTNVQ
        V+   S +    S DHIL+I +GLGS Y+SM+  I A+    SVQEVMSL LTQE+Q ESKL + T  +LPSV+++  +  K +ES      N    N  
Subjt:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHS--KASES-----DNKKSTNVQ

Query:  FSQ---------------------------------------------------NVDAAEAVVPTRTEVAEVVRGITIEIEHNIPIGILTLGATNHLTHN
        ++Q                                                   + + +   +    +++ +V  + + I+ N        GATNHLTH+
Subjt:  FSQ---------------------------------------------------NVDAAEAVVPTRTEVAEVVRGITIEIEHNIPIGILTLGATNHLTHN

Query:  FNNLSVEIEYGGGNQVHMGNGA
         +NLS+  EYGGGNQ++  NG+
Subjt:  FNNLSVEIEYGGGNQVHMGNGA

TYJ95829.1 putative copia-like retrotransposon Hopscotch polyprotein [Cucumis melo var. makuwa]1.6e-1134.9Show/hide
Query:  ISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSKASESDNKKSTNVQFSQNVDAAEAVVPTRTEVAEVVRGIT
        + + LG++Y+ M+  I A+    SVQ++MSL LTQE+QIESK++  +D SLP+V++   ++  +S  K+                     E++ +V    
Subjt:  ISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSKASESDNKKSTNVQFSQNVDAAEAVVPTRTEVAEVVRGIT

Query:  IEIEHNIPIGILTLGATNHLTHNFNNLSVEIEYGGGNQVHMGNGADEKL
        + ++ N       LGATNHL HN +NLS   EYGGG+ ++  NG+D K+
Subjt:  IEIEHNIPIGILTLGATNHLTHNFNNLSVEIEYGGGNQVHMGNGADEKL

TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.1e-1030.63Show/hide
Query:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHS--KASES-----DNKKSTNVQ
        V+   S +    S DHIL+I +GLGS Y+SM+  I A+    SVQEVMSL LTQE+Q ESKL + T  +LPSV+++  +  K +ES      N    N  
Subjt:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHS--KASES-----DNKKSTNVQ

Query:  FSQ---------------------------------------------------NVDAAEAVVPTRTEVAEVVRGITIEIEHNIPIGILTLGATNHLTHN
        ++Q                                                   + + +   +    +++ +V  + + I+ N        GATNHLTH+
Subjt:  FSQ---------------------------------------------------NVDAAEAVVPTRTEVAEVVRGITIEIEHNIPIGILTLGATNHLTHN

Query:  FNNLSVEIEYGGGNQVHMGNGA
         +NLS+  EYGGGNQ++  NG+
Subjt:  FNNLSVEIEYGGGNQVHMGNGA

TrEMBL top hitse value%identityAlignment
A0A5A7T077 Putative mitochondrial protein2.0e-0732.87Show/hide
Query:  GLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSKASESDNKKSTNVQFSQNVDAAEAVVPTRTEVAEVVRGITIEI
        GLG++Y+ M+  I A+    SVQ++MSL LTQE+QIE                   S ++ S N +  N   +  + A             +V    + +
Subjt:  GLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSKASESDNKKSTNVQFSQNVDAAEAVVPTRTEVAEVVRGITIEI

Query:  EHNIPIGILTLGATNHLTHNFNNLSVEIEYGGGNQVHMGNGAD
        + N       LGATNHL HN +NLS   EYGGG+ ++  NG+D
Subjt:  EHNIPIGILTLGATNHLTHNFNNLSVEIEYGGGNQVHMGNGAD

A0A5A7TUB3 Putative glutathione S-transferase isoform X13.5e-0745Show/hide
Query:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSK
        V+   S +    + DHIL+I +GLG++Y+SM+  I A+    SVQ+VMSL LTQE+QIESK++  ++ SLP+V++  H++
Subjt:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSK

A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-1030.63Show/hide
Query:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHS--KASES-----DNKKSTNVQ
        V+   S +    S DHIL+I +GLGS Y+SM+  I A+    SVQEVMSL LTQE+Q ESKL + T  +LPSV+++  +  K +ES      N    N  
Subjt:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHS--KASES-----DNKKSTNVQ

Query:  FSQ---------------------------------------------------NVDAAEAVVPTRTEVAEVVRGITIEIEHNIPIGILTLGATNHLTHN
        ++Q                                                   + + +   +    +++ +V  + + I+ N        GATNHLTH+
Subjt:  FSQ---------------------------------------------------NVDAAEAVVPTRTEVAEVVRGITIEIEHNIPIGILTLGATNHLTHN

Query:  FNNLSVEIEYGGGNQVHMGNGA
         +NLS+  EYGGGNQ++  NG+
Subjt:  FNNLSVEIEYGGGNQVHMGNGA

A0A5D3B9Z0 Putative copia-like retrotransposon Hopscotch polyprotein8.0e-1234.9Show/hide
Query:  ISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSKASESDNKKSTNVQFSQNVDAAEAVVPTRTEVAEVVRGIT
        + + LG++Y+ M+  I A+    SVQ++MSL LTQE+QIESK++  +D SLP+V++   ++  +S  K+                     E++ +V    
Subjt:  ISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSKASESDNKKSTNVQFSQNVDAAEAVVPTRTEVAEVVRGIT

Query:  IEIEHNIPIGILTLGATNHLTHNFNNLSVEIEYGGGNQVHMGNGADEKL
        + ++ N       LGATNHL HN +NLS   EYGGG+ ++  NG+D K+
Subjt:  IEIEHNIPIGILTLGATNHLTHNFNNLSVEIEYGGGNQVHMGNGADEKL

A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-1030.63Show/hide
Query:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHS--KASES-----DNKKSTNVQ
        V+   S +    S DHIL+I +GLGS Y+SM+  I A+    SVQEVMSL LTQE+Q ESKL + T  +LPSV+++  +  K +ES      N    N  
Subjt:  VEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHS--KASES-----DNKKSTNVQ

Query:  FSQ---------------------------------------------------NVDAAEAVVPTRTEVAEVVRGITIEIEHNIPIGILTLGATNHLTHN
        ++Q                                                   + + +   +    +++ +V  + + I+ N        GATNHLTH+
Subjt:  FSQ---------------------------------------------------NVDAAEAVVPTRTEVAEVVRGITIEIEHNIPIGILTLGATNHLTHN

Query:  FNNLSVEIEYGGGNQVHMGNGA
         +NLS+  EYGGGNQ++  NG+
Subjt:  FNNLSVEIEYGGGNQVHMGNGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCCAAAATTCCAGGGGTGCAGTGGAGGAGACGATTTCTTCATCTTCTCAAACCTTTAGTCCGGATCATATACTATTTATTTCATCGGGTCTTGGGTCAAAATA
TGAATCTATGGTGTTTTTCATTTATGCCAAAGTCGGCCCTCAATCGGTTCAAGAAGTCATGTCCCTCTTTCTCACTCAAGAGAATCAAATTGAGAGTAAGCTTTCCACTC
CCACTGATGGGAGTCTTCCGTCTGTAAGTCTCATGGTTCATTCTAAAGCATCTGAATCTGATAATAAAAAATCTACTAATGTTCAGTTTTCTCAGAACGTGGATGCGGCG
GAGGCTGTGGTTCCTACTCGAACAGAGGTGGCAGAGGTGGTCCGTGGAATAACAATAGAAATCGAACACAATATACCAATTGGTATCTTGACTCTTGGGGCTACTAATCA
CTTGACTCACAATTTCAATAACCTCTCGGTTGAAATTGAGTATGGTGGTGGTAATCAAGTTCACATGGGAAATGGAGCAGATGAGAAATTGGTTGGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCCAAAATTCCAGGGGTGCAGTGGAGGAGACGATTTCTTCATCTTCTCAAACCTTTAGTCCGGATCATATACTATTTATTTCATCGGGTCTTGGGTCAAAATA
TGAATCTATGGTGTTTTTCATTTATGCCAAAGTCGGCCCTCAATCGGTTCAAGAAGTCATGTCCCTCTTTCTCACTCAAGAGAATCAAATTGAGAGTAAGCTTTCCACTC
CCACTGATGGGAGTCTTCCGTCTGTAAGTCTCATGGTTCATTCTAAAGCATCTGAATCTGATAATAAAAAATCTACTAATGTTCAGTTTTCTCAGAACGTGGATGCGGCG
GAGGCTGTGGTTCCTACTCGAACAGAGGTGGCAGAGGTGGTCCGTGGAATAACAATAGAAATCGAACACAATATACCAATTGGTATCTTGACTCTTGGGGCTACTAATCA
CTTGACTCACAATTTCAATAACCTCTCGGTTGAAATTGAGTATGGTGGTGGTAATCAAGTTCACATGGGAAATGGAGCAGATGAGAAATTGGTTGGAGTTTAA
Protein sequenceShow/hide protein sequence
MSSQNSRGAVEETISSSSQTFSPDHILFISSGLGSKYESMVFFIYAKVGPQSVQEVMSLFLTQENQIESKLSTPTDGSLPSVSLMVHSKASESDNKKSTNVQFSQNVDAA
EAVVPTRTEVAEVVRGITIEIEHNIPIGILTLGATNHLTHNFNNLSVEIEYGGGNQVHMGNGADEKLVGV