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Lag0011475 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011475
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr1:25826521..25826854
RNA-Seq ExpressionLag0011475
SyntenyLag0011475
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0046034 - ATP metabolic process (biological process)
GO:1902600 - proton transmembrane transport (biological process)
GO:0005524 - ATP binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.8e-0668.18Show/hide
Query:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
        EEVD+  + +QRTS+FDRIKPLTTR SVFQR+SM   EEEN+ P
Subjt:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
KAA0051497.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.8e-0668.18Show/hide
Query:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
        EEVD+  + +QRTS+FDRIKPLTTR SVFQR+SM   EEEN+ P
Subjt:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
KAA0055533.1 hypothetical protein E6C27_scaffold222G00040 [Cucumis melo var. makuwa]2.8e-0656.9Show/hide
Query:  TTEEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFPP--PLDLQLSKG
        +++EV++  +  QRTS+FDRIKP TTR SVFQR+SM   EEEN+ P    ++LQLSKG
Subjt:  TTEEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFPP--PLDLQLSKG
KAA0068201.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.6e-0761.54Show/hide
Query:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFPPPLDLQLS
        EEVD+  + +Q+TS+FDRIKPLTTR SVFQR+SM   EEEN+ P P   Q S
Subjt:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFPPPLDLQLS
TYK23553.1 hypothetical protein E5676_scaffold500G00600 [Cucumis melo var. makuwa]2.1e-0668.18Show/hide
Query:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
        EEVD+  K +QRTS+FDRIKPLTTR SVF+R+SM   EEEN+ P
Subjt:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
TrEMBL top hitse value%identityAlignment
A0A5A7TQ06 Retrotransposon gag protein1.4e-0668.18Show/hide
Query:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
        EEVD+  + +QRTS+FDRIKPLTTR SVFQR+SM   EEEN+ P
Subjt:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
A0A5A7U974 Retrotransposon gag protein1.4e-0668.18Show/hide
Query:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
        EEVD+  + +QRTS+FDRIKPLTTR SVFQR+SM   EEEN+ P
Subjt:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
A0A5A7UAU4 Retrotransposon gag protein1.4e-0668.18Show/hide
Query:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
        EEVD+  + +QRTS+FDRIKPLTTR SVFQR+SM   EEEN+ P
Subjt:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
A0A5A7VRG7 Retrotransposon gag protein4.6e-0761.54Show/hide
Query:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFPPPLDLQLS
        EEVD+  + +Q+TS+FDRIKPLTTR SVFQR+SM   EEEN+ P P   Q S
Subjt:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFPPPLDLQLS
A0A5D3DIY2 Uncharacterized protein1.0e-0668.18Show/hide
Query:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
        EEVD+  K +QRTS+FDRIKPLTTR SVF+R+SM   EEEN+ P
Subjt:  EEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGCAAATTGTATCAGAGCTCAGTACGGTGGACCTATTCAAGATTCCGTCTTGTATTCCAAACCTTTCTCAACCTCGACAACCGAAGAGGTTGACAGTTTTAGGAA
GGGTGAACAAAGGACTTCCATCTTCGATCGCATCAAGCCTCTAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGCCCGCGGCAGAAGAAGAAAATGAGTTTCCAC
CTCCACTCGACCTTCAGCTTTCCAAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGCAAATTGTATCAGAGCTCAGTACGGTGGACCTATTCAAGATTCCGTCTTGTATTCCAAACCTTTCTCAACCTCGACAACCGAAGAGGTTGACAGTTTTAGGAA
GGGTGAACAAAGGACTTCCATCTTCGATCGCATCAAGCCTCTAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGCCCGCGGCAGAAGAAGAAAATGAGTTTCCAC
CTCCACTCGACCTTCAGCTTTCCAAAGGCTAA
Protein sequenceShow/hide protein sequence
MIANCIRAQYGGPIQDSVLYSKPFSTSTTEEVDSFRKGEQRTSIFDRIKPLTTRPSVFQRMSMPAAEEENEFPPPLDLQLSKG