; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011479 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011479
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:25911412..25912774
RNA-Seq ExpressionLag0011479
SyntenyLag0011479
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]1.4e-2430.64Show/hide
Query:  SEEEVLKQMEKLKIE-EGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSY
        SE E+ +  E L +E E   V EI +D I D D+D +  +  K+LT K +N   F  ++ +IW   G +++E  G N F+  F     + ++   GPW +
Subjt:  SEEEVLKQMEKLKIE-EGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSY

Query:  DDAIIVFE---------ELRENCSAEALDFKGDPSGCISCYCRKYAGE-LGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKM
          ++IV E         +L+ N +   +     P  C++    K+  E +G  + +       E+ +  G+ +RVK++V++ +PLKR   +K+G      
Subjt:  DDAIIVFE---------ELRENCSAEALDFKGDPSGCISCYCRKYAGE-LGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKM

Query:  WIPATYERLPDFCYYCGRLGHVVQECISDGAEASA
         +   YERLPDFC+ CGR+GH V+EC+ + A+ +A
Subjt:  WIPATYERLPDFCYYCGRLGHVVQECISDGAEASA

TXG48431.1 hypothetical protein EZV62_027725 [Acer yangbiense]2.0e-2333.85Show/hide
Query:  MACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEELRENCSAEAL-----DFKGDPSGCISCYCR
        +A KIL+ + IN   F  ++ RIW ++G ++IE    N++   F+   D+ R+  GGPWS+D A+IV EE     +  +L     DF    +     Y  
Subjt:  MACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEELRENCSAEAL-----DFKGDPSGCISCYCR

Query:  KYAGE-LGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDFCYYCGRLGHVVQECISDGAEASAERS
        K  G+ LG+ IG     +   +    G+ +RV++ V V++PL+R   V +     +  +P  YERLP FC+ CG +GH+V EC S G +   E S
Subjt:  KYAGE-LGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDFCYYCGRLGHVVQECISDGAEASAERS

XP_015380691.1 uncharacterized protein LOC107174364 [Citrus sinensis]3.1e-2432.84Show/hide
Query:  KILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEELRE---------NCSAEALDFKGDPSGCISCYC
        K+L ++ +N   F   + ++W     +KIE  G N F+ KF    DK R+  GGPW +D A++V  E +            +A  +  +  P   I+C  
Subjt:  KILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEELRE---------NCSAEALDFKGDPSGCISCYC

Query:  RKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDFCYYCGRLGHVVQECISDGAEASAERSYGTTV
        ++   ELG  IG  E  E+DENG+  GE  R+++ +N+  PLK+   +K       + +P  YERLPDFCY CG +GH  +EC     +   +  YG  +
Subjt:  RKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDFCYYCGRLGHVVQECISDGAEASAERSYGTTV

Query:  K
        K
Subjt:  K

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.2e-2833.88Show/hide
Query:  KLKIEEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIE-GAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEEL
        KL  EE K  V+ID   ++   K  E  + CK+L+ + I+  V    +   W ++  A  ++  G N+F+  F RS D+ RI + GPW++D A+I+ +  
Subjt:  KLKIEEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIE-GAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEEL

Query:  RENCSAEALDFKG--------DPSGCISCYCRKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDF
                +DF+         D S  ++C  +  A  LGN+IG+FE  ES+ N    G  LRV+++ +V +PL RG  + +    G  WIP  YERLPDF
Subjt:  RENCSAEALDFKG--------DPSGCISCYCRKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDF

Query:  CYYCGRLGHVVQECISDGAEASAERS--YGTTVKEEGAEEGS
         Y+CGRL H++++C SD    S  ++  YG  ++ +G +  S
Subjt:  CYYCGRLGHVVQECISDGAEASAERS--YGTTVKEEGAEEGS

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.0e-2730.27Show/hide
Query:  EEVLKQMEKLKI--EEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYD
        E +L   +K K+  EE +  +++D D +  A++     +  K+L  ++I+  V S ++   W +E  + +E  G N+F+  F R  D  R+ K GPW +D
Subjt:  EEVLKQMEKLKI--EEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYD

Query:  DAIIVFEELRENCSAEALDFKGDPSGC------ISCYCRKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPAT
         A+IV ++   + +   L+F             +S   +  A  LGN+IG F   + +E G   G +LR+++ +++ +PL+RG  + I    G  WIP  
Subjt:  DAIIVFEELRENCSAEALDFKGDPSGC------ISCYCRKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPAT

Query:  YERLPDFCYYCGRLGHVVQEC----ISDGAEASAERSYGTTVKEEGAEEGSKGQRNIGKQP
        YERLPDFCY+CG +GH   +C    ++   ++ A   YG  ++  G++ G++  R  GK P
Subjt:  YERLPDFCYYCGRLGHVVQEC----ISDGAEASAERSYGTTVKEEGAEEGSKGQRNIGKQP

TrEMBL top hitse value%identityAlignment
A0A2N9GF83 CCHC-type domain-containing protein1.6e-2633.64Show/hide
Query:  EEVLKQMEKLKIEEGKRV-VEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDD
        EE+++   +  + E +     ID++ + +A     + +  K+L SK  N       M RIWG+   I  +  G N+F+ +F+   D  R+ KG PW +D+
Subjt:  EEVLKQMEKLKIEEGKRV-VEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDD

Query:  AIIVFEELRENCSAEALDFKG-----DPSGCISCYCRKYAGE-LGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATY
         ++V  E   +C A  + F          G    Y  K  GE +G +IG+ E  +  E+G   G  LRV+I V++ +P++RG  V  GS  G+MWI   Y
Subjt:  AIIVFEELRENCSAEALDFKG-----DPSGCISCYCRKYAGE-LGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATY

Query:  ERLPDFCYYCGRLGHVVQEC
        ERLP FC++CG+LGH  +EC
Subjt:  ERLPDFCYYCGRLGHVVQEC

A0A2Z6LV25 Uncharacterized protein (Fragment)1.3e-2328.96Show/hide
Query:  QMEKLKIEEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFE
        ++ K  I++  + + ++++++ + D+ F   +  KI T    N   F   M + W     I+I+    N+F+ KF   R+   + K GPWS+D  +++  
Subjt:  QMEKLKIEEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFE

Query:  EL--RENCSAEALDFKGDPSGCISCYCRKY-----------AGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPAT
         +   E  S  A+D        +S + R Y           A +LGN++G FE  +  E+ +M G+ LR+++ V++ +PLKRG+  K+     ++W+   
Subjt:  EL--RENCSAEALDFKGDPSGCISCYCRKY-----------AGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPAT

Query:  YERLPDFCYYCGRLGHVVQEC
        YERLP+FC+ CGR+GH +++C
Subjt:  YERLPDFCYYCGRLGHVVQEC

A0A6J1BSZ1 uncharacterized protein LOC1110054815.9e-2933.88Show/hide
Query:  KLKIEEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIE-GAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEEL
        KL  EE K  V+ID   ++   K  E  + CK+L+ + I+  V    +   W ++  A  ++  G N+F+  F RS D+ RI + GPW++D A+I+ +  
Subjt:  KLKIEEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIE-GAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEEL

Query:  RENCSAEALDFKG--------DPSGCISCYCRKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDF
                +DF+         D S  ++C  +  A  LGN+IG+FE  ES+ N    G  LRV+++ +V +PL RG  + +    G  WIP  YERLPDF
Subjt:  RENCSAEALDFKG--------DPSGCISCYCRKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDF

Query:  CYYCGRLGHVVQECISDGAEASAERS--YGTTVKEEGAEEGS
         Y+CGRL H++++C SD    S  ++  YG  ++ +G +  S
Subjt:  CYYCGRLGHVVQECISDGAEASAERS--YGTTVKEEGAEEGS

A0A6J1DU55 uncharacterized protein LOC1110231351.5e-2730.27Show/hide
Query:  EEVLKQMEKLKI--EEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYD
        E +L   +K K+  EE +  +++D D +  A++     +  K+L  ++I+  V S ++   W +E  + +E  G N+F+  F R  D  R+ K GPW +D
Subjt:  EEVLKQMEKLKI--EEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYD

Query:  DAIIVFEELRENCSAEALDFKGDPSGC------ISCYCRKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPAT
         A+IV ++   + +   L+F             +S   +  A  LGN+IG F   + +E G   G +LR+++ +++ +PL+RG  + I    G  WIP  
Subjt:  DAIIVFEELRENCSAEALDFKGDPSGC------ISCYCRKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPAT

Query:  YERLPDFCYYCGRLGHVVQEC----ISDGAEASAERSYGTTVKEEGAEEGSKGQRNIGKQP
        YERLPDFCY+CG +GH   +C    ++   ++ A   YG  ++  G++ G++  R  GK P
Subjt:  YERLPDFCYYCGRLGHVVQEC----ISDGAEASAERSYGTTVKEEGAEEGSKGQRNIGKQP

A0A6P9EID8 uncharacterized protein LOC1183488569.8e-2428.33Show/hide
Query:  EEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEELRENCS
        E+ K  + ++   ++      E  +   +LT +  N      +M ++W     +  +  G+N+F+ +F   RDK RI   GPWS+D  +++ ++L  N  
Subjt:  EEGKRVVEIDDDDIDDADKDFENFMACKILTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEELRENCS

Query:  AEALDFKGDPSGCISCYCRKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDFCYYCGRLGHVVQE
           L                    +GN IG+ E  + +++    GE LR++++VN+++PL RG  VK+G   G +WI   YERLP+FCY CG+LGH  ++
Subjt:  AEALDFKGDPSGCISCYCRKYAGELGNSIGVFEAAESDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDFCYYCGRLGHVVQE

Query:  CISDGAEASAERS---------YGTTVKEEGAEEGSKGQR
        C  +G + + +            GTT+   G  + + GQR
Subjt:  CISDGAEASAERS---------YGTTVKEEGAEEGSKGQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G36228.1 nucleic acid binding;zinc ion binding8.2e-0722.42Show/hide
Query:  MPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEELRENCSAEALDF-------KGDPSGCISCYCRKYAGELGNSIGVFEAAE
        +P  WG+   +         F  +FR   D +   +  PW +++  I  +   +  + + L F       +G P   +S    +    + +++G   A +
Subjt:  MPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEELRENCSAEALDF-------KGDPSGCISCYCRKYAGELGNSIGVFEAAE

Query:  SDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDFCYYCGRLGHVVQEC
         +E    +   +RVK++++  EPL+    V+  S    M I   YE+L   C  C R+ H V  C
Subjt:  SDENGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDFCYYCGRLGHVVQEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGGAGGACAACCATCCGGTTTGCCAAGGGGAAGGAGAAACCCAGGAGGCACTCCATGCGAGAGGAAAACTCCCACGGGGATCAAAGGAAATGGACGAGGAGGG
CAACAACTTGGTTTGCACGAATGATTCGGGAGGCAAAAACAATTCCAGAGAAAATAGGGAGGAAGAGGAAGTTGGAATGGAGGATTATAACAGCGAGGAGGAGGTCCTCA
AACAGATGGAAAAACTAAAAATAGAAGAAGGAAAAAGAGTGGTGGAAATAGATGATGATGATATTGATGATGCAGACAAAGATTTCGAGAACTTCATGGCATGCAAAATC
CTTACGTCGAAAATGATAAATGGACATGTGTTCTCTGTTATCATGCCACGGATATGGGGTATTGAGGGAGCTATTAAGATTGAAAAAGCAGGGGCAAACATGTTCATATG
TAAATTTAGGAGATCAAGAGACAAAATAAGAATCACAAAAGGAGGTCCCTGGAGTTATGACGATGCTATAATAGTTTTTGAAGAGCTACGGGAAAACTGTAGTGCCGAAG
CGCTTGATTTTAAAGGGGATCCTTCTGGGTGCATTTCTTGTTATTGTAGGAAGTATGCAGGGGAGCTGGGGAACTCCATAGGCGTTTTCGAAGCAGCTGAATCTGATGAA
AATGGGAAGATGAAGGGGGAAACCCTGCGAGTGAAGATTAAGGTAAATGTTAATGAACCTCTGAAGAGAGGAACTAATGTTAAAATTGGTTCAATGGCAGGTAAAATGTG
GATCCCAGCCACGTACGAGAGGCTGCCGGACTTCTGCTACTATTGCGGTAGACTTGGACACGTTGTACAAGAGTGCATATCAGATGGGGCTGAAGCAAGCGCGGAGAGAA
GCTATGGGACTACGGTCAAAGAGGAAGGGGCAGAGGAAGGTTCGAAAGGTCAAAGGAACATTGGAAAACAACCGAATCAGAGGATGAAGGACAAACGAGAGAGAAGAAAA
TCAGATCTAGAAGGAAAAAAAGAGGGAACTTCAACATCCATGGGGGACCATCCATTACATAACTCACCGGTGGTGACCGGCGAGATCAGGGAGTTAGATCGAGAAGAAGA
CAAAAGCAGGCAGAATCAGGGGAAAGGACAAAACAGTATCAGACCTCCTGATGTGACAAATTCTGAAAAGGTATGGGTGTCAGGAGAAACCTATGGAGAAAGGACATCGA
CAGGAAAAGAGCCGTTGAAATCAACATCCGGAATGGAAGTCGATGGTGGGCTTTTGGGTTTGGATACAGAAGAAGCATCGAAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGGAGGACAACCATCCGGTTTGCCAAGGGGAAGGAGAAACCCAGGAGGCACTCCATGCGAGAGGAAAACTCCCACGGGGATCAAAGGAAATGGACGAGGAGGG
CAACAACTTGGTTTGCACGAATGATTCGGGAGGCAAAAACAATTCCAGAGAAAATAGGGAGGAAGAGGAAGTTGGAATGGAGGATTATAACAGCGAGGAGGAGGTCCTCA
AACAGATGGAAAAACTAAAAATAGAAGAAGGAAAAAGAGTGGTGGAAATAGATGATGATGATATTGATGATGCAGACAAAGATTTCGAGAACTTCATGGCATGCAAAATC
CTTACGTCGAAAATGATAAATGGACATGTGTTCTCTGTTATCATGCCACGGATATGGGGTATTGAGGGAGCTATTAAGATTGAAAAAGCAGGGGCAAACATGTTCATATG
TAAATTTAGGAGATCAAGAGACAAAATAAGAATCACAAAAGGAGGTCCCTGGAGTTATGACGATGCTATAATAGTTTTTGAAGAGCTACGGGAAAACTGTAGTGCCGAAG
CGCTTGATTTTAAAGGGGATCCTTCTGGGTGCATTTCTTGTTATTGTAGGAAGTATGCAGGGGAGCTGGGGAACTCCATAGGCGTTTTCGAAGCAGCTGAATCTGATGAA
AATGGGAAGATGAAGGGGGAAACCCTGCGAGTGAAGATTAAGGTAAATGTTAATGAACCTCTGAAGAGAGGAACTAATGTTAAAATTGGTTCAATGGCAGGTAAAATGTG
GATCCCAGCCACGTACGAGAGGCTGCCGGACTTCTGCTACTATTGCGGTAGACTTGGACACGTTGTACAAGAGTGCATATCAGATGGGGCTGAAGCAAGCGCGGAGAGAA
GCTATGGGACTACGGTCAAAGAGGAAGGGGCAGAGGAAGGTTCGAAAGGTCAAAGGAACATTGGAAAACAACCGAATCAGAGGATGAAGGACAAACGAGAGAGAAGAAAA
TCAGATCTAGAAGGAAAAAAAGAGGGAACTTCAACATCCATGGGGGACCATCCATTACATAACTCACCGGTGGTGACCGGCGAGATCAGGGAGTTAGATCGAGAAGAAGA
CAAAAGCAGGCAGAATCAGGGGAAAGGACAAAACAGTATCAGACCTCCTGATGTGACAAATTCTGAAAAGGTATGGGTGTCAGGAGAAACCTATGGAGAAAGGACATCGA
CAGGAAAAGAGCCGTTGAAATCAACATCCGGAATGGAAGTCGATGGTGGGCTTTTGGGTTTGGATACAGAAGAAGCATCGAAGGAATAA
Protein sequenceShow/hide protein sequence
MDKEDNHPVCQGEGETQEALHARGKLPRGSKEMDEEGNNLVCTNDSGGKNNSRENREEEEVGMEDYNSEEEVLKQMEKLKIEEGKRVVEIDDDDIDDADKDFENFMACKI
LTSKMINGHVFSVIMPRIWGIEGAIKIEKAGANMFICKFRRSRDKIRITKGGPWSYDDAIIVFEELRENCSAEALDFKGDPSGCISCYCRKYAGELGNSIGVFEAAESDE
NGKMKGETLRVKIKVNVNEPLKRGTNVKIGSMAGKMWIPATYERLPDFCYYCGRLGHVVQECISDGAEASAERSYGTTVKEEGAEEGSKGQRNIGKQPNQRMKDKRERRK
SDLEGKKEGTSTSMGDHPLHNSPVVTGEIRELDREEDKSRQNQGKGQNSIRPPDVTNSEKVWVSGETYGERTSTGKEPLKSTSGMEVDGGLLGLDTEEASKE