; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011494 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011494
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:26194062..26194364
RNA-Seq ExpressionLag0011494
SyntenyLag0011494
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3440753.1 hypothetical protein FNV43_RR19039 [Rhamnella rubrinervis]8.8e-2351Show/hide
Query:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKTR
        ++C + QKV CA+ MLKK  + WW++ +R +N+  +P+ W +F ELF EK+F    + +K+ EF++L  G LSLLEYERKFD LS+YA HLVDT  RK R
Subjt:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKTR

KAF3445903.1 hypothetical protein FNV43_RR11080 [Rhamnella rubrinervis]7.5e-2251.58Show/hide
Query:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTD
        +DC + QKV CA+ MLKKG + WW++ ++T+N+  + + W +F ELF EK+FP     +K  EF++L+QG LSLLEYERKFD LS+Y PHLV+ +
Subjt:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTD

XP_015896950.1 uncharacterized protein LOC107430602 [Ziziphus jujuba]6.1e-2455.67Show/hide
Query:  DCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRK
        +C++  KV CA  ML+K    WW  TRRT NV  NP+ WE+F  LF + +FP T+R DK  EFI+LEQG L+L+EYER+F+ LS++APHLVDTD +K
Subjt:  DCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRK

XP_015900803.1 uncharacterized protein LOC107433919 [Ziziphus jujuba]5.3e-2050Show/hide
Query:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKTR
        M+C D +KV CA  MLK+G + WW +T R W+V  NP++W              T R +K  EFI+L+QGK++L +YERKFD LS+YAPHLVDTD RK +
Subjt:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKTR

XP_022155935.1 uncharacterized protein LOC111022935 [Momordica charantia]2.1e-3271.74Show/hide
Query:  VACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKTR
        VACA  MLK GVNKWWN+TR+TWN+  NP+  +RF ELF+ KFFP T RQ+KE +FIKLEQGKLSL+EYE+KF+ LS YAPHLVDTDWRK R
Subjt:  VACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKTR

TrEMBL top hitse value%identityAlignment
A0A438F252 CCHC-type domain-containing protein7.8e-1743.88Show/hide
Query:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRK
        +DC++ QK + AA ML K  N WW +TRR       P++W +F E F++K+FP +VR+ K  EFI+LEQG +++ +YE KF  LS+++P L+ T+  K
Subjt:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRK

A0A438H628 Transposon Ty3-G Gag-Pol polyprotein6.0e-1743.43Show/hide
Query:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKT
        +DC++ QK + AA ML K  + WW +TRR       P++W +F E F++K+FP +VR+ K  EFI+LEQG +++ +YE KF  LS+++P L+ T+  KT
Subjt:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKT

A0A6J1DNX0 uncharacterized protein LOC1110229351.0e-3271.74Show/hide
Query:  VACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKTR
        VACA  MLK GVNKWWN+TR+TWN+  NP+  +RF ELF+ KFFP T RQ+KE +FIKLEQGKLSL+EYE+KF+ LS YAPHLVDTDWRK R
Subjt:  VACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKTR

A0A6P4AUI0 uncharacterized protein LOC1074339192.6e-2050Show/hide
Query:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKTR
        M+C D +KV CA  MLK+G + WW +T R W+V  NP++W              T R +K  EFI+L+QGK++L +YERKFD LS+YAPHLVDTD RK +
Subjt:  MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKTR

A0A6P4B4I6 uncharacterized protein LOC1074306023.0e-2455.67Show/hide
Query:  DCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRK
        +C++  KV CA  ML+K    WW  TRRT NV  NP+ WE+F  LF + +FP T+R DK  EFI+LEQG L+L+EYER+F+ LS++APHLVDTD +K
Subjt:  DCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTGCAATGATCGACAAAAGGTGGCTTGTGCTGCTTGTATGCTAAAGAAAGGAGTAAACAAATGGTGGAACTTAACAAGAAGGACGTGGAATGTGCCTAATAACCC
ATTGAGTTGGGAAAGATTCAATGAGCTTTTCTTCGAGAAGTTCTTTCCCCCTACTGTTAGACAAGATAAGGAAGTTGAGTTCATTAAGTTGGAGCAGGGGAAGTTGAGCC
TATTGGAGTATGAAAGAAAGTTTGATGTACTTTCTCAGTATGCTCCTCACTTGGTGGACACTGATTGGAGGAAAACAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTGCAATGATCGACAAAAGGTGGCTTGTGCTGCTTGTATGCTAAAGAAAGGAGTAAACAAATGGTGGAACTTAACAAGAAGGACGTGGAATGTGCCTAATAACCC
ATTGAGTTGGGAAAGATTCAATGAGCTTTTCTTCGAGAAGTTCTTTCCCCCTACTGTTAGACAAGATAAGGAAGTTGAGTTCATTAAGTTGGAGCAGGGGAAGTTGAGCC
TATTGGAGTATGAAAGAAAGTTTGATGTACTTTCTCAGTATGCTCCTCACTTGGTGGACACTGATTGGAGGAAAACAAGATAA
Protein sequenceShow/hide protein sequence
MDCNDRQKVACAACMLKKGVNKWWNLTRRTWNVPNNPLSWERFNELFFEKFFPPTVRQDKEVEFIKLEQGKLSLLEYERKFDVLSQYAPHLVDTDWRKTR