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Lag0011504 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011504
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationchr1:26416455..26416987
RNA-Seq ExpressionLag0011504
SyntenyLag0011504
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060071.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]8.0e-2492.65Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLF S F VSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR

KAE8649764.1 hypothetical protein Csa_012384 [Cucumis sativus]2.1e-2494.12Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLF SVF VSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR

KAG6595630.1 hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2082.86Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LLR +A HTLR YPRFR AFSRLF S+F VS SRL+
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLS

KAG6603254.1 hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2281.82Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSRSCN
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL RHTA HT RAYPRFRLAFSR+FGSVF VSYSR    S  CN
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSRSCN

KAG7037385.1 hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2281.82Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSRSCN
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL RHTA HT RAYPRFRLAFSR+FGSVF VSYSR    S  CN
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSRSCN

TrEMBL top hitse value%identityAlignment
A0A0A0KZF7 Uncharacterized protein1.0e-2494.12Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLF SVF VSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR

A0A2C9V7E1 Uncharacterized protein1.9e-1880Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+ FVET+EDLLR TA ++LRAYPRFRLAFSR+F ++F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS

A0A5A7V2T5 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 13.9e-2492.65Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLF S F VSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR

A0A6P6AMB2 uncharacterized protein LOC111310902 isoform X12.2e-1980Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVET+ED+LR T ++TLRAYPR RL FSR+FGS+F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS

A0A6P6AMC9 uncharacterized protein LOC111310902 isoform X22.2e-1980Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVET+ED+LR T ++TLRAYPR RL FSR+FGS+F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein3.0e-1355.38Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS
        MLQLFF +AFSA PLTLY+PPIR L++FVET+E++     +++ R +PR R+A+SRL    FS S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCAGTGCCATTGACGCTCTATGTGCCGCCGATTCGGAGCCTCAGTCTGTTCGTCGAAACCCTAGAAGATCTTCTCCG
TCACACCGCCATTCATACGCTCAGAGCTTATCCTCGCTTTCGCCTCGCCTTCTCTCGCCTCTTCGGCTCTGTATTCAGCGTTTCTTATTCCAGATTGTCTGTTTCTTCGC
GTTCTTGTAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCAGTGCCATTGACGCTCTATGTGCCGCCGATTCGGAGCCTCAGTCTGTTCGTCGAAACCCTAGAAGATCTTCTCCG
TCACACCGCCATTCATACGCTCAGAGCTTATCCTCGCTTTCGCCTCGCCTTCTCTCGCCTCTTCGGCTCTGTATTCAGCGTTTCTTATTCCAGATTGTCTGTTTCTTCGC
GTTCTTGTAATTAG
Protein sequenceShow/hide protein sequence
MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSRSCN