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Lag0011517 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011517
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger protein WIP2
Genome locationchr1:26931231..26931758
RNA-Seq ExpressionLag0011517
SyntenyLag0011517
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0048856 - anatomical structure development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK21911.1 zinc finger protein WIP2 [Cucumis melo var. makuwa]1.9e-3677.87Show/hide
Query:  MSHNCFSY--PYPNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMASVMCGSSSEIDHVGDG--S
        MSHNCFSY  P P PPPPSSPPLREALPLLGL+SPPEQRQEQEE+D  DGGG  G    ++ SVTVALHIGLPSPSAAE+AS+MCGSSSEIDHVGDG  S
Subjt:  MSHNCFSY--PYPNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMASVMCGSSSEIDHVGDG--S

Query:  DHGNNNSQD-DFGQSTKTLIKG
        ++ NNN QD D GQSTKTLIKG
Subjt:  DHGNNNSQD-DFGQSTKTLIKG
XP_008442237.2 PREDICTED: zinc finger protein WIP2 [Cucumis melo]2.5e-3670.71Show/hide
Query:  PPPPFPTLTTLNFSPQVNMSHNCFSY--PYPNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMAS
        P  P  ++  LN     +MSHNCFSY  P P PPPPSSPPLREALPLLGL+SPPEQRQEQEE+D  DGGG  G    ++ SVTVALHIGLPSPSAAE+AS
Subjt:  PPPPFPTLTTLNFSPQVNMSHNCFSY--PYPNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMAS

Query:  VMCGSSSEIDHVGDG--SDHGNNNSQD-DFGQSTKTLIKG
        +MCGSSSEIDHVGDG  S++ NNN QD D GQSTKTLIKG
Subjt:  VMCGSSSEIDHVGDG--SDHGNNNSQD-DFGQSTKTLIKG
XP_011653936.1 zinc finger protein WIP2 [Cucumis sativus]5.5e-3670Show/hide
Query:  PPPPFPTLTTLNFSPQVNMSHNCFSYPY--PNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMAS
        P  P  ++  LN     NMSHNCFSYPY  P PPPPSSPPLREALPLLGL+SPPEQRQEQEEED  DGG   G    ++ SVTVALHIGLPSPSAAE+AS
Subjt:  PPPPFPTLTTLNFSPQVNMSHNCFSYPY--PNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMAS

Query:  VMCGSSSEIDHVGDG--SDHGNNNSQD-DFGQSTKTLIKG
        +MCGSS+EI+HVGDG  S++ NN+ QD D GQSTKTLIKG
Subjt:  VMCGSSSEIDHVGDG--SDHGNNNSQD-DFGQSTKTLIKG
XP_022151658.1 zinc finger protein WIP2-like [Momordica charantia]4.6e-3569.93Show/hide
Query:  FQLISKCSKIQLPPPPFPTLTTLNFSPQVNMS-HNCFSYPYPNPPPPSSPPLREALPLL-GLISPPEQRQEQEEEDDGGGSGGDDGSVTVALHIGLPSPS
        F  + K + ++   PP P     +FSPQ NMS HN +SY YP PPPPSSPPLREALPLL GLISPPEQ Q +EEEDDGGG  G DGSVT+ALHIGLPSPS
Subjt:  FQLISKCSKIQLPPPPFPTLTTLNFSPQVNMS-HNCFSYPYPNPPPPSSPPLREALPLL-GLISPPEQRQEQEEEDDGGGSGGDDGSVTVALHIGLPSPS

Query:  AAEMASVMCGSSSEIDHVGDGSDHGNNNSQDDFGQSTKTLIKG
        AAEMA+VM GSSSEIDH GD  DHGNN+   D GQSTKTLIKG
Subjt:  AAEMASVMCGSSSEIDHVGDGSDHGNNNSQDDFGQSTKTLIKG
XP_038883214.1 zinc finger protein WIP2-like [Benincasa hispida]1.8e-4279.84Show/hide
Query:  NFSPQVNMSHNCFSYPYPNPPPPSSPPLREALPLLGLISPPEQRQEQEEEDDGGG---SGGDDGSVTVALHIGLPSPSAAEMASVMCGSSSEIDHVGDG-
        N +P +NMSHNCFSY YPNPPPP SPPLREALPLLGL+SPPEQRQEQEEEDDGGG    G D+ SVTVALHIGLPSPSAAE+AS+MCGSSSEIDHVGDG 
Subjt:  NFSPQVNMSHNCFSYPYPNPPPPSSPPLREALPLLGLISPPEQRQEQEEEDDGGG---SGGDDGSVTVALHIGLPSPSAAEMASVMCGSSSEIDHVGDG-

Query:  -SDHGNNNSQD-DFGQSTKTLIKG
         S++ NNN+ D D GQSTKTLIKG
Subjt:  -SDHGNNNSQD-DFGQSTKTLIKG
TrEMBL top hitse value%identityAlignment
A0A0A0KYV4 Uncharacterized protein2.6e-3670Show/hide
Query:  PPPPFPTLTTLNFSPQVNMSHNCFSYPY--PNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMAS
        P  P  ++  LN     NMSHNCFSYPY  P PPPPSSPPLREALPLLGL+SPPEQRQEQEEED  DGG   G    ++ SVTVALHIGLPSPSAAE+AS
Subjt:  PPPPFPTLTTLNFSPQVNMSHNCFSYPY--PNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMAS

Query:  VMCGSSSEIDHVGDG--SDHGNNNSQD-DFGQSTKTLIKG
        +MCGSS+EI+HVGDG  S++ NN+ QD D GQSTKTLIKG
Subjt:  VMCGSSSEIDHVGDG--SDHGNNNSQD-DFGQSTKTLIKG
A0A1S3B589 zinc finger protein WIP21.2e-3670.71Show/hide
Query:  PPPPFPTLTTLNFSPQVNMSHNCFSY--PYPNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMAS
        P  P  ++  LN     +MSHNCFSY  P P PPPPSSPPLREALPLLGL+SPPEQRQEQEE+D  DGGG  G    ++ SVTVALHIGLPSPSAAE+AS
Subjt:  PPPPFPTLTTLNFSPQVNMSHNCFSY--PYPNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMAS

Query:  VMCGSSSEIDHVGDG--SDHGNNNSQD-DFGQSTKTLIKG
        +MCGSSSEIDHVGDG  S++ NNN QD D GQSTKTLIKG
Subjt:  VMCGSSSEIDHVGDG--SDHGNNNSQD-DFGQSTKTLIKG
A0A5D3DE17 Zinc finger protein WIP29.1e-3777.87Show/hide
Query:  MSHNCFSY--PYPNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMASVMCGSSSEIDHVGDG--S
        MSHNCFSY  P P PPPPSSPPLREALPLLGL+SPPEQRQEQEE+D  DGGG  G    ++ SVTVALHIGLPSPSAAE+AS+MCGSSSEIDHVGDG  S
Subjt:  MSHNCFSY--PYPNPPPPSSPPLREALPLLGLISPPEQRQEQEEED--DGGGSGG----DDGSVTVALHIGLPSPSAAEMASVMCGSSSEIDHVGDG--S

Query:  DHGNNNSQD-DFGQSTKTLIKG
        ++ NNN QD D GQSTKTLIKG
Subjt:  DHGNNNSQD-DFGQSTKTLIKG
A0A6J1DCU3 zinc finger protein WIP2-like2.2e-3569.93Show/hide
Query:  FQLISKCSKIQLPPPPFPTLTTLNFSPQVNMS-HNCFSYPYPNPPPPSSPPLREALPLL-GLISPPEQRQEQEEEDDGGGSGGDDGSVTVALHIGLPSPS
        F  + K + ++   PP P     +FSPQ NMS HN +SY YP PPPPSSPPLREALPLL GLISPPEQ Q +EEEDDGGG  G DGSVT+ALHIGLPSPS
Subjt:  FQLISKCSKIQLPPPPFPTLTTLNFSPQVNMS-HNCFSYPYPNPPPPSSPPLREALPLL-GLISPPEQRQEQEEEDDGGGSGGDDGSVTVALHIGLPSPS

Query:  AAEMASVMCGSSSEIDHVGDGSDHGNNNSQDDFGQSTKTLIKG
        AAEMA+VM GSSSEIDH GD  DHGNN+   D GQSTKTLIKG
Subjt:  AAEMASVMCGSSSEIDHVGDGSDHGNNNSQDDFGQSTKTLIKG
A0A6J1HT75 zinc finger protein WIP2-like3.2e-3470.16Show/hide
Query:  NFSPQVNMSHNCFSYPY------PNPPPPSSPPLREALPLLGLISPPEQRQEQEEEDDGGGSGGDDGSVTVALHIGLPSPSAAEMASVMCGSSSEIDHVG
        N SP  NMSHNCFSYPY      PNPPPPSSPPLREALPLLGL+SPPEQRQEQEE+DD GGS  ++ SVTVALHIGLP+PS AE+AS+MCGSSSEID   
Subjt:  NFSPQVNMSHNCFSYPY------PNPPPPSSPPLREALPLLGLISPPEQRQEQEEEDDGGGSGGDDGSVTVALHIGLPSPSAAEMASVMCGSSSEIDHVG

Query:  DGSDHGNNNSQDDFGQSTKTLIKG
                  + +FGQSTKTLIKG
Subjt:  DGSDHGNNNSQDDFGQSTKTLIKG
SwissProt top hitse value%identityAlignment
Q9SVY1 Zinc finger protein WIP22.9e-0835.63Show/hide
Query:  PPPPFPTLTTLNFSPQVNMSHNCFSYPYPNPPPPSSPPLREALPLLGLISPPEQRQ----------------------EQEEEDDGGGSGGDDGSVTVAL
        P PP    ++  F PQ          P P P PP SPPLREALPLL L SP  ++Q                      +   +DD      DD  VTVAL
Subjt:  PPPPFPTLTTLNFSPQVNMSHNCFSYPYPNPPPPSSPPLREALPLLGLISPPEQRQ----------------------EQEEEDDGGGSGGDDGSVTVAL

Query:  HIGLPSPSAAEMASVMCGSSS-----------------EIDH------VGDGSDHGNNNSQDDFGQSTKTLIKG
        HIGLPSPSA EMAS++  SSS                 ++DH      VG G D   ++   D G     L KG
Subjt:  HIGLPSPSAAEMASVMCGSSS-----------------EIDH------VGDGSDHGNNNSQDDFGQSTKTLIKG
Arabidopsis top hitse value%identityAlignment
AT3G57670.1 C2H2-type zinc finger family protein2.1e-0935.63Show/hide
Query:  PPPPFPTLTTLNFSPQVNMSHNCFSYPYPNPPPPSSPPLREALPLLGLISPPEQRQ----------------------EQEEEDDGGGSGGDDGSVTVAL
        P PP    ++  F PQ          P P P PP SPPLREALPLL L SP  ++Q                      +   +DD      DD  VTVAL
Subjt:  PPPPFPTLTTLNFSPQVNMSHNCFSYPYPNPPPPSSPPLREALPLLGLISPPEQRQ----------------------EQEEEDDGGGSGGDDGSVTVAL

Query:  HIGLPSPSAAEMASVMCGSSS-----------------EIDH------VGDGSDHGNNNSQDDFGQSTKTLIKG
        HIGLPSPSA EMAS++  SSS                 ++DH      VG G D   ++   D G     L KG
Subjt:  HIGLPSPSAAEMASVMCGSSS-----------------EIDH------VGDGSDHGNNNSQDDFGQSTKTLIKG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCAACTCATTAGCAAGTGTTCTAAAATTCAACTCCCTCCTCCACCATTTCCCACCCTCACAACCCTCAACTTCTCCCCACAGGTGAATATGTCTCACAATTGCTT
CTCTTATCCCTACCCGAACCCGCCTCCACCGTCGTCTCCGCCGCTGCGAGAGGCTCTACCGCTTCTCGGGCTGATATCTCCACCCGAGCAGCGGCAGGAGCAAGAGGAAG
AAGACGACGGCGGAGGCAGCGGAGGCGACGACGGGTCGGTCACCGTGGCGCTGCACATAGGGCTACCGAGCCCTAGCGCGGCGGAGATGGCTTCTGTGATGTGTGGTTCT
TCATCTGAGATTGATCATGTTGGAGATGGATCAGATCATGGTAATAATAATAGTCAGGATGATTTTGGACAGTCTACAAAAACCCTAATAAAGGGCAGTACTGGATCCCT
ACTCCTTCTCAAATCCTCATTGGTCCAACTCAATTCTCTTGCCCTGTTTGCTTCAAAACCTTCAATAGATACAACAACATGCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCAACTCATTAGCAAGTGTTCTAAAATTCAACTCCCTCCTCCACCATTTCCCACCCTCACAACCCTCAACTTCTCCCCACAGGTGAATATGTCTCACAATTGCTT
CTCTTATCCCTACCCGAACCCGCCTCCACCGTCGTCTCCGCCGCTGCGAGAGGCTCTACCGCTTCTCGGGCTGATATCTCCACCCGAGCAGCGGCAGGAGCAAGAGGAAG
AAGACGACGGCGGAGGCAGCGGAGGCGACGACGGGTCGGTCACCGTGGCGCTGCACATAGGGCTACCGAGCCCTAGCGCGGCGGAGATGGCTTCTGTGATGTGTGGTTCT
TCATCTGAGATTGATCATGTTGGAGATGGATCAGATCATGGTAATAATAATAGTCAGGATGATTTTGGACAGTCTACAAAAACCCTAATAAAGGGCAGTACTGGATCCCT
ACTCCTTCTCAAATCCTCATTGGTCCAACTCAATTCTCTTGCCCTGTTTGCTTCAAAACCTTCAATAGATACAACAACATGCAGGTAA
Protein sequenceShow/hide protein sequence
MFQLISKCSKIQLPPPPFPTLTTLNFSPQVNMSHNCFSYPYPNPPPPSSPPLREALPLLGLISPPEQRQEQEEEDDGGGSGGDDGSVTVALHIGLPSPSAAEMASVMCGS
SSEIDHVGDGSDHGNNNSQDDFGQSTKTLIKGSTGSLLLLKSSLVQLNSLALFASKPSIDTTTCR