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Lag0011531 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011531
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionArabinogalactan peptide 23-like
Genome locationchr1:27328191..27328520
RNA-Seq ExpressionLag0011531
SyntenyLag0011531
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1831355.1 unnamed protein product [Ananas comosus var. bracteatus]4.9e-0757.38Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH
        MEMK  ACAA VA A++ + +  + AAAPAPGP+SGA A  P VGT++GA+  S +AYCLH
Subjt:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH

CAD1831358.1 unnamed protein product [Ananas comosus var. bracteatus]4.9e-0757.38Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH
        MEMK  ACAA VA A++ + +  + AAAPAPGP+SGA A  P VGT++GA+  S +AYCLH
Subjt:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH

KAA0035760.1 arabinogalactan peptide 23-like [Cucumis melo var. makuwa]5.8e-1690.16Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAED-AAAPAPGPSSGASATLPVVGTLLGASAASLIAYCL
        MEMKNFACAAF+AV ASLSMVLA D AA+PAPGPSSG SATLPVVGTLLGASAASLIAYCL
Subjt:  MEMKNFACAAFVAVAASLSMVLAED-AAAPAPGPSSGASATLPVVGTLLGASAASLIAYCL

KAE8649766.1 hypothetical protein Csa_011936, partial [Cucumis sativus]2.0e-1389.47Show/hide
Query:  NFACAAFVAVAASLSMVLAED-AAAPAPGPSSGASATLPVVGTLLGASAASLIAYCL
        NFACAAF+ VAASLSMVLA D AA+PAPGPSS ASATLPVVGTLLGASAASLIAYCL
Subjt:  NFACAAFVAVAASLSMVLAED-AAAPAPGPSSGASATLPVVGTLLGASAASLIAYCL

PKI47791.1 hypothetical protein CRG98_031820 [Punica granatum]6.4e-0766.67Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAED--AAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH
        MEMK  +CA  V VAASLS  LA +  AAAPAPGPSSGASA LP VG+L+GAS  S +AY LH
Subjt:  MEMKNFACAAFVAVAASLSMVLAED--AAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH

TrEMBL top hitse value%identityAlignment
A0A2I0IUW3 Uncharacterized protein3.1e-0766.67Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAED--AAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH
        MEMK  +CA  V VAASLS  LA +  AAAPAPGPSSGASA LP VG+L+GAS  S +AY LH
Subjt:  MEMKNFACAAFVAVAASLSMVLAED--AAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH

A0A2P5CAP7 Uncharacterized protein1.5e-0659.02Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH
        ME+K  + A  VA A+  S++ A +  APAPGPSSGASATLPVVG+L+GAS  S  AY LH
Subjt:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH

A0A5D3E271 Arabinogalactan peptide 23-like2.8e-1690.16Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAED-AAAPAPGPSSGASATLPVVGTLLGASAASLIAYCL
        MEMKNFACAAF+AV ASLSMVLA D AA+PAPGPSSG SATLPVVGTLLGASAASLIAYCL
Subjt:  MEMKNFACAAFVAVAASLSMVLAED-AAAPAPGPSSGASATLPVVGTLLGASAASLIAYCL

A0A6V7PKG4 Uncharacterized protein2.4e-0757.38Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH
        MEMK  ACAA VA A++ + +  + AAAPAPGP+SGA A  P VGT++GA+  S +AYCLH
Subjt:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH

A0A6V7PL33 Uncharacterized protein2.4e-0757.38Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH
        MEMK  ACAA VA A++ + +  + AAAPAPGP+SGA A  P VGT++GA+  S +AYCLH
Subjt:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH

SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 233.5e-0852.46Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH
        MEMK  AC    A A+  +++ AE+  APAPGP+S ASA LP +G+L+GAS  SL +Y LH
Subjt:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH

Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)6.8e-0753.23Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGP-SSGASATLPVVGTLLGASAASLIAYCLH
        MEMK  AC   V  AAS++ V+A +  APAPGP +SGAS  +P +G+L+GAS  SL AY L+
Subjt:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGP-SSGASATLPVVGTLLGASAASLIAYCLH

AT3G57690.1 arabinogalactan protein 232.5e-0952.46Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH
        MEMK  AC    A A+  +++ AE+  APAPGP+S ASA LP +G+L+GAS  SL +Y LH
Subjt:  MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGAAGAATTTTGCCTGCGCCGCCTTCGTCGCTGTTGCCGCCTCCCTGAGCATGGTTTTGGCTGAGGACGCAGCAGCCCCGGCACCCGGCCCATCCAGCGGCGC
TTCCGCTACCTTGCCCGTCGTCGGGACGCTGCTAGGTGCATCTGCTGCCTCTCTTATTGCTTACTGCCTTCATATCGATTTGTTTTCGATACATGGTGTAATAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGAAGAATTTTGCCTGCGCCGCCTTCGTCGCTGTTGCCGCCTCCCTGAGCATGGTTTTGGCTGAGGACGCAGCAGCCCCGGCACCCGGCCCATCCAGCGGCGC
TTCCGCTACCTTGCCCGTCGTCGGGACGCTGCTAGGTGCATCTGCTGCCTCTCTTATTGCTTACTGCCTTCATATCGATTTGTTTTCGATACATGGTGTAATAAATTGA
Protein sequenceShow/hide protein sequence
MEMKNFACAAFVAVAASLSMVLAEDAAAPAPGPSSGASATLPVVGTLLGASAASLIAYCLHIDLFSIHGVIN