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Lag0011533 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011533
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposase
Genome locationchr1:27383689..27384245
RNA-Seq ExpressionLag0011533
SyntenyLag0011533
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043582.1 uncharacterized protein E6C27_scaffold320G00100 [Cucumis melo var. makuwa]7.7e-1437.5Show/hide
Query:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV
        NP WSVVL+  QR  E++  +DE+ D   +C Y  +K MP + T N+ ++ ++ + R DC+             ++M+    SS DE +  P+ R   FV
Subjt:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV

Query:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI
        PRG TTM  L+ +RD G++  I++N+ GQPVGA +  +QS +GV V Q   I
Subjt:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI

KAA0054737.1 transposase [Cucumis melo var. makuwa]1.0e-1336.91Show/hide
Query:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCD----------DYIMDSSGRSSSDEGDRPDRR---FVPRG
        NP WSVVL+  QR  E++  +DE+ D   +C Y  +K MP + T N+ N+ ++ + R DC+            I     RS  +    P+ R   FVPRG
Subjt:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCD----------DYIMDSSGRSSSDEGDRPDRR---FVPRG

Query:  ATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI
         TTM  L+ +R+ G++  I++N+ GQPVGA +  +QS +GV V Q   I
Subjt:  ATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI

TYJ96572.1 uncharacterized protein E5676_scaffold791G00020 [Cucumis melo var. makuwa]1.7e-1337.41Show/hide
Query:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDDYIMDSSGRSSSDEGDRPDRR---FVPRGATTMRHLSRI
        NP WSVVL+  QR  E++  +DE+ D   +C Y  +K MP + T N+ ++ ++ + R DC+   M+   RS  +    P  R   FVP G TTM  L+ +
Subjt:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDDYIMDSSGRSSSDEGDRPDRR---FVPRGATTMRHLSRI

Query:  RDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI
        R+ G++  I++N+ GQPVGA +  +QS +GV + Q   I
Subjt:  RDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI

TYK11813.1 transposase [Cucumis melo var. makuwa]2.9e-1336.84Show/hide
Query:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV
        NP WSVVL+  QR  E++  +DE+ D   +C Y  +K MP + T N+ ++ ++ + R DC+             ++M+    SS DE +  P+ R   FV
Subjt:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV

Query:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI
        PRG TTM  L+ +R+ G++  I++N+ GQPVGA +  +QS +GV V Q   I
Subjt:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI

TYK27996.1 transposase [Cucumis melo var. makuwa]2.9e-1336.84Show/hide
Query:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV
        NP WSVVL+  QR  E++  +DE+ D   +C Y  +K MP + T N+ ++ ++ + R DC+             ++M+    SS DE +  P+ R   FV
Subjt:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV

Query:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI
        PRG TTM  L+ +R+ G++  I++N+ GQPVGA +  +QS +GV V Q   I
Subjt:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI

TrEMBL top hitse value%identityAlignment
A0A5A7TJY3 Uncharacterized protein3.7e-1437.5Show/hide
Query:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV
        NP WSVVL+  QR  E++  +DE+ D   +C Y  +K MP + T N+ ++ ++ + R DC+             ++M+    SS DE +  P+ R   FV
Subjt:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV

Query:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI
        PRG TTM  L+ +RD G++  I++N+ GQPVGA +  +QS +GV V Q   I
Subjt:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI

A0A5A7TY60 Transposase1.4e-1336.84Show/hide
Query:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV
        NP WSVVL+  QR  E++  +DE+ D   +C Y  +K MP + T N+ ++ ++ + R DC+             ++M+    SS DE +  P+ R   FV
Subjt:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV

Query:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI
        PRG TTM  L+ +R+ G++  I++N+ GQPVGA +  +QS +GV V Q   I
Subjt:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI

A0A5A7UJG0 Transposase4.9e-1436.91Show/hide
Query:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCD----------DYIMDSSGRSSSDEGDRPDRR---FVPRG
        NP WSVVL+  QR  E++  +DE+ D   +C Y  +K MP + T N+ N+ ++ + R DC+            I     RS  +    P+ R   FVPRG
Subjt:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCD----------DYIMDSSGRSSSDEGDRPDRR---FVPRG

Query:  ATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI
         TTM  L+ +R+ G++  I++N+ GQPVGA +  +QS +GV V Q   I
Subjt:  ATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI

A0A5D3B9N1 Uncharacterized protein8.3e-1437.41Show/hide
Query:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDDYIMDSSGRSSSDEGDRPDRR---FVPRGATTMRHLSRI
        NP WSVVL+  QR  E++  +DE+ D   +C Y  +K MP + T N+ ++ ++ + R DC+   M+   RS  +    P  R   FVP G TTM  L+ +
Subjt:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDDYIMDSSGRSSSDEGDRPDRR---FVPRGATTMRHLSRI

Query:  RDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI
        R+ G++  I++N+ GQPVGA +  +QS +GV + Q   I
Subjt:  RDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI

A0A5D3C2U9 Transposase1.4e-1336.84Show/hide
Query:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV
        NP WSVVL+  QR  E++  +DE+ D   +C Y  +K MP + T N+ ++ ++ + R DC+             ++M+    SS DE +  P+ R   FV
Subjt:  NPSWSVVLSPLQRDHEDETNDDELEDTALDC-YGLLKSMP-ITTLNDMNEDSTLFTRADCDD------------YIMDSSGRSSSDEGDR-PDRR---FV

Query:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI
        PRG TTM  L+ +R+ G++  I++N+ GQPVGA +  +QS +GV V Q   I
Subjt:  PRGATTMRHLSRIRDEGERRVIRYNDEGQPVGANATTLQSQLGVLVLQPCTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTAGTTGGTCTGTTGTGTTGTCTCCACTTCAACGAGATCACGAAGACGAGACAAACGATGATGAATTGGAAGACACTGCTCTTGATTGTTATGGTTTATTGAA
ATCAATGCCTATCACCACACTCAATGATATGAACGAAGACTCAACGTTGTTTACCAGAGCTGACTGTGACGATTATATCATGGACTCCTCTGGTAGAAGCAGCAGCGATG
AAGGAGATCGACCTGATAGGAGATTCGTTCCTAGAGGTGCTACGACCATGCGCCATCTATCACGCATTAGGGATGAGGGAGAGAGACGTGTCATTAGATATAATGACGAA
GGGCAACCTGTTGGAGCGAATGCCACAACATTGCAAAGTCAACTCGGGGTTCTTGTGCTACAACCATGCACCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTAGTTGGTCTGTTGTGTTGTCTCCACTTCAACGAGATCACGAAGACGAGACAAACGATGATGAATTGGAAGACACTGCTCTTGATTGTTATGGTTTATTGAA
ATCAATGCCTATCACCACACTCAATGATATGAACGAAGACTCAACGTTGTTTACCAGAGCTGACTGTGACGATTATATCATGGACTCCTCTGGTAGAAGCAGCAGCGATG
AAGGAGATCGACCTGATAGGAGATTCGTTCCTAGAGGTGCTACGACCATGCGCCATCTATCACGCATTAGGGATGAGGGAGAGAGACGTGTCATTAGATATAATGACGAA
GGGCAACCTGTTGGAGCGAATGCCACAACATTGCAAAGTCAACTCGGGGTTCTTGTGCTACAACCATGCACCATCTAA
Protein sequenceShow/hide protein sequence
MNPSWSVVLSPLQRDHEDETNDDELEDTALDCYGLLKSMPITTLNDMNEDSTLFTRADCDDYIMDSSGRSSSDEGDRPDRRFVPRGATTMRHLSRIRDEGERRVIRYNDE
GQPVGANATTLQSQLGVLVLQPCTI