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Lag0011536 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011536
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationchr1:27427852..27428667
RNA-Seq ExpressionLag0011536
SyntenyLag0011536
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033299.1 uncharacterized protein E6C27_scaffold845G001100 [Cucumis melo var. makuwa]1.0e-4146.63Show/hide
Query:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------
        NISYDKAWR R++AL SIRG+ E+ YA++  FS +LI  NPGTYT  E+DD+GRFK++FM+L+A I AW YC PVI VD                     
Subjt:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------

Query:  ------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIRQLESIVPSIRPKLEEIGLSKWTRAFF
                                EHG+CAFHL K LK  HKS PM+  F  CA+AY  + +EYY+RQLE + PS+R +LE +G  KW RAFF
Subjt:  ------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIRQLESIVPSIRPKLEEIGLSKWTRAFF

KAA0040870.1 uncharacterized protein E6C27_scaffold345G00200 [Cucumis melo var. makuwa]4.4e-4043.27Show/hide
Query:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------
        NISYDKAWR R++AL SIRG+ ++ YA++  FS +LI  NPGTYT  E DD+GRFK++FM+L+A I AW YC PVI VD                     
Subjt:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------

Query:  ---------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIRQLESIVPSIRPKLEEIGL
                                               EHG+CAFHL K LK  HKS PM+  F  CA+AY  +E+EYY+RQLE + PS+R +LE +G 
Subjt:  ---------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIRQLESIVPSIRPKLEEIGL

Query:  SKWTRAFF
         KW RAFF
Subjt:  SKWTRAFF

TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]1.8e-3840.27Show/hide
Query:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------
        NISYDKAWR R++AL SIRG+ E+ YA++  FS +LI  NPGTYT  E DD+GRFK++FM+L+A I AW YC PVI VD                     
Subjt:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------

Query:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR
                                                                 EHG+CAFHL K LK  HKS PM+  F  CA+AY  +E+EYY+R
Subjt:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR

Query:  QLESIVPSIRPKLEEIGLSKWTRAFF
        QLE + PS+R +LE +G  KW RAFF
Subjt:  QLESIVPSIRPKLEEIGLSKWTRAFF

TYK22587.1 uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa]2.4e-3839.82Show/hide
Query:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------
        NISYDKAWR R++AL SIRG+ E+ YA++  FS +LI  NPGTYT  E DD+GRFK++FM+L+A I AW YC PVI VD                     
Subjt:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------

Query:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR
                                                                 EHG+CAFHL K LK  HKS PM+  F  CA+ Y ++E+EYY+R
Subjt:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR

Query:  QLESIVPSIRPKLEEIGLSKWTRAFF
        QLE + PS+R +LE +G  KW RAFF
Subjt:  QLESIVPSIRPKLEEIGLSKWTRAFF

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.8e-3840.27Show/hide
Query:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------
        NISYDKAWR R++AL SIRG+ E+ YA++  FS +LI  NPGTYT  E DD+GRFK++FM+L+A I AW YC PVI VD                     
Subjt:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------

Query:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR
                                                                 EHG+CAFHL K LK  HKS PM+  F  CA+AY  +E+EYY+R
Subjt:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR

Query:  QLESIVPSIRPKLEEIGLSKWTRAFF
        QLE + PS+R +LE +G  KW RAFF
Subjt:  QLESIVPSIRPKLEEIGLSKWTRAFF

TrEMBL top hitse value%identityAlignment
A0A5A7SVT9 CCHC-type domain-containing protein5.1e-4246.63Show/hide
Query:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------
        NISYDKAWR R++AL SIRG+ E+ YA++  FS +LI  NPGTYT  E+DD+GRFK++FM+L+A I AW YC PVI VD                     
Subjt:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------

Query:  ------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIRQLESIVPSIRPKLEEIGLSKWTRAFF
                                EHG+CAFHL K LK  HKS PM+  F  CA+AY  + +EYY+RQLE + PS+R +LE +G  KW RAFF
Subjt:  ------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIRQLESIVPSIRPKLEEIGLSKWTRAFF

A0A5A7TC03 ZnF_PMZ domain-containing protein2.1e-4043.27Show/hide
Query:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------
        NISYDKAWR R++AL SIRG+ ++ YA++  FS +LI  NPGTYT  E DD+GRFK++FM+L+A I AW YC PVI VD                     
Subjt:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------

Query:  ---------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIRQLESIVPSIRPKLEEIGL
                                               EHG+CAFHL K LK  HKS PM+  F  CA+AY  +E+EYY+RQLE + PS+R +LE +G 
Subjt:  ---------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIRQLESIVPSIRPKLEEIGL

Query:  SKWTRAFF
         KW RAFF
Subjt:  SKWTRAFF

A0A5D3CDB8 Uncharacterized protein8.9e-3940.27Show/hide
Query:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------
        NISYDKAWR R++AL SIRG+ E+ YA++  FS +LI  NPGTYT  E DD+GRFK++FM+L+A I AW YC PVI VD                     
Subjt:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------

Query:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR
                                                                 EHG+CAFHL K LK  HKS PM+  F  CA+AY  +E+EYY+R
Subjt:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR

Query:  QLESIVPSIRPKLEEIGLSKWTRAFF
        QLE + PS+R +LE +G  KW RAFF
Subjt:  QLESIVPSIRPKLEEIGLSKWTRAFF

A0A5D3DFW1 Uncharacterized protein1.2e-3839.82Show/hide
Query:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------
        NISYDKAWR R++AL SIRG+ E+ YA++  FS +LI  NPGTYT  E DD+GRFK++FM+L+A I AW YC PVI VD                     
Subjt:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------

Query:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR
                                                                 EHG+CAFHL K LK  HKS PM+  F  CA+ Y ++E+EYY+R
Subjt:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR

Query:  QLESIVPSIRPKLEEIGLSKWTRAFF
        QLE + PS+R +LE +G  KW RAFF
Subjt:  QLESIVPSIRPKLEEIGLSKWTRAFF

A0A5D3E198 MuDRA-like transposase8.9e-3940.27Show/hide
Query:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------
        NISYDKAWR R++AL SIRG+ E+ YA++  FS +LI  NPGTYT  E DD+GRFK++FM+L+A I AW YC PVI VD                     
Subjt:  NISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVD---------------------

Query:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR
                                                                 EHG+CAFHL K LK  HKS PM+  F  CA+AY  +E+EYY+R
Subjt:  ---------------------------------------------------------EHGICAFHLSKKLKLKHKSKPMDKIFMNCAKAYAVIEYEYYIR

Query:  QLESIVPSIRPKLEEIGLSKWTRAFF
        QLE + PS+R +LE +G  KW RAFF
Subjt:  QLESIVPSIRPKLEEIGLSKWTRAFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTAACATTAGTTATGATAAAGCTTGGAGGGCTCGTGATCTTGCCTTGAAATCTATAAGGGGGTCTGCTGAAGAGTTGTATGCCCTTATCCCCACATTTTCTGC
CTCATTGATCGAAAAGAACCCAGGAACATATACAGAGTCTGAACTTGATGATGATGGAAGGTTCAAATACTTCTTCATGTCACTCTCTGCCTTTATTCATGCGTGGAAAT
ATTGTTTTCCTGTCATACCAGTTGATGAACATGGGATTTGTGCATTTCATTTGTCAAAAAAATTGAAACTCAAACACAAGTCCAAACCAATGGATAAAATCTTCATGAAC
TGTGCGAAGGCTTACGCGGTTATTGAGTATGAGTATTACATTAGACAGTTAGAGTCTATAGTTCCTTCAATTAGGCCAAAGTTAGAAGAGATTGGTCTTTCTAAATGGAC
AAGGGCATTTTTTTGTTCGGAAAAGATATTCAATGATGACTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTAACATTAGTTATGATAAAGCTTGGAGGGCTCGTGATCTTGCCTTGAAATCTATAAGGGGGTCTGCTGAAGAGTTGTATGCCCTTATCCCCACATTTTCTGC
CTCATTGATCGAAAAGAACCCAGGAACATATACAGAGTCTGAACTTGATGATGATGGAAGGTTCAAATACTTCTTCATGTCACTCTCTGCCTTTATTCATGCGTGGAAAT
ATTGTTTTCCTGTCATACCAGTTGATGAACATGGGATTTGTGCATTTCATTTGTCAAAAAAATTGAAACTCAAACACAAGTCCAAACCAATGGATAAAATCTTCATGAAC
TGTGCGAAGGCTTACGCGGTTATTGAGTATGAGTATTACATTAGACAGTTAGAGTCTATAGTTCCTTCAATTAGGCCAAAGTTAGAAGAGATTGGTCTTTCTAAATGGAC
AAGGGCATTTTTTTGTTCGGAAAAGATATTCAATGATGACTACTAA
Protein sequenceShow/hide protein sequence
MEFNISYDKAWRARDLALKSIRGSAEELYALIPTFSASLIEKNPGTYTESELDDDGRFKYFFMSLSAFIHAWKYCFPVIPVDEHGICAFHLSKKLKLKHKSKPMDKIFMN
CAKAYAVIEYEYYIRQLESIVPSIRPKLEEIGLSKWTRAFFCSEKIFNDDY