; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011557 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011557
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpentatricopeptide repeat-containing protein At1g80550, mitochondrial
Genome locationchr1:27742472..27742822
RNA-Seq ExpressionLag0011557
SyntenyLag0011557
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014158.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-5086.21Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFE  L W LIQRM QSPFAS DHATFRI+FK YASAHLV+EAIAA ERLREFKLRDET FCNLIDALCEYRHVVEAQDLCFGK++ L+C AS
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMGW
        TKIHNLILRGWLKMGW
Subjt:  TKIHNLILRGWLKMGW

XP_022148858.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Momordica charantia]2.6e-5086.21Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFE  + W L+QRMQQS FAS DHATFRILFK YASAHLVTEAIAA ER REFKLRDET FCNLIDALCEYRHVVEAQDLCFGK+K +DC+AS
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMGW
        TKIHNLILRGWLKMGW
Subjt:  TKIHNLILRGWLKMGW

XP_022953157.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata]2.6e-5086.21Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFE  L W LIQRM QSPFAS DHATFRI+FK YASAHLV+EAIAA ERLREFKLRDET FCNLID+LCEYRHVVEAQDLCFGK++ L+CDAS
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMGW
        TKIHNLILRGWLKMGW
Subjt:  TKIHNLILRGWLKMGW

XP_022991827.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima]1.2e-5087.07Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFE  L W LIQRM QSPFAS DHATFRI+FK YASAHLV+EAIAA ERLREFKLRDET FCNLIDALCEYRHVVEAQDLCFGK++ L+CDAS
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMGW
        TKIHNLILRGWLKMGW
Subjt:  TKIHNLILRGWLKMGW

XP_023547614.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita pepo subsp. pepo]7.5e-5086.21Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFE  L W LIQRM QSPFAS DHATFRI+FK YASAHLV+EAIAA ERLREFKLRDET FCNLIDALCEYRHVVEAQDLCFGK++ L+C AS
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMGW
        TKIHNLILRGWLKMGW
Subjt:  TKIHNLILRGWLKMGW

TrEMBL top hitse value%identityAlignment
A0A1S3CFA1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial4.4e-4882.76Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFE  L W LI RM+QSPFA  DH TFRILFK YA+AHLVTEAIAA ERLREFKLRDET FCNLIDALCE RHV EAQ+LCFGK++ LDCD+S
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMGW
        TKIHNLILRGWLKMGW
Subjt:  TKIHNLILRGWLKMGW

A0A5A7UVK9 Pentatricopeptide repeat-containing protein2.0e-4883.62Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFE  L W LI RM+QSPFA  DH TFRILFK YASAHLVTEAIAA ERLREFKLRDET FCNLIDALCE RHV EAQ+LCFGK++ LDCD+S
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMGW
        TKIHNLILRGWLKMGW
Subjt:  TKIHNLILRGWLKMGW

A0A6J1D599 pentatricopeptide repeat-containing protein At1g80550, mitochondrial1.2e-5086.21Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFE  + W L+QRMQQS FAS DHATFRILFK YASAHLVTEAIAA ER REFKLRDET FCNLIDALCEYRHVVEAQDLCFGK+K +DC+AS
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMGW
        TKIHNLILRGWLKMGW
Subjt:  TKIHNLILRGWLKMGW

A0A6J1GNU3 pentatricopeptide repeat-containing protein At1g80550, mitochondrial1.2e-5086.21Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFE  L W LIQRM QSPFAS DHATFRI+FK YASAHLV+EAIAA ERLREFKLRDET FCNLID+LCEYRHVVEAQDLCFGK++ L+CDAS
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMGW
        TKIHNLILRGWLKMGW
Subjt:  TKIHNLILRGWLKMGW

A0A6J1JMZ1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial5.6e-5187.07Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFE  L W LIQRM QSPFAS DHATFRI+FK YASAHLV+EAIAA ERLREFKLRDET FCNLIDALCEYRHVVEAQDLCFGK++ L+CDAS
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMGW
        TKIHNLILRGWLKMGW
Subjt:  TKIHNLILRGWLKMGW

SwissProt top hitse value%identityAlignment
Q9LFQ4 Pentatricopeptide repeat-containing protein At5g15010, mitochondrial1.6e-0732.46Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLR---DETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDC
        M+ ILGK  +    W LI  M++   + ++  T  I+ + Y + H V +AI      + FKL    D+  F +L+ ALC Y++V +A  L F        
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLR---DETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDC

Query:  DASTKIHNLILRGW
        DA  K  N++L GW
Subjt:  DASTKIHNLILRGW

Q9LIL5 Putative pentatricopeptide repeat-containing protein At3g152004.6e-1032.76Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETL-FCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA
        +LD+LGK    +    +   M +     ++  T+ +L   YA+AH V EA+   ER +EF + D+ + F  L+  LC Y+HV  A+ L   + +   CD 
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETL-FCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA

Query:  STKIHNLILRGWLKMG
          K  N+IL GW  +G
Subjt:  STKIHNLILRGWLKMG

Q9M8M3 Pentatricopeptide repeat-containing protein At1g80550, mitochondrial3.9e-3357.98Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKS---KGLDC
        ++DILGK+FE ++ WALI RM  +  +  +H TFRI+FK Y +AHLV EAI A ++L +F LRDET F NL+DALCE++HVVEA++LCFGK+    G   
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKS---KGLDC

Query:  DASTKIHNLILRGWLKMGW
         ++TKIHNLILRGW K+GW
Subjt:  DASTKIHNLILRGWLKMGW

Q9SSR6 Pentatricopeptide repeat-containing protein At1g52640, mitochondrial4.6e-1030.77Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLR---DETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDC
        +++ILG   +  LLW  +   ++  +  +    F I+F+ Y+ A+L +EA  A  R+ EF ++   D+     L+ +LC+ +HV  AQ+  FGK+KG   
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLR---DETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDC

Query:  DASTKIHNLILRGWLKM
          S K +++++RGW ++
Subjt:  DASTKIHNLILRGWLKM

Arabidopsis top hitse value%identityAlignment
AT1G52640.1 Pentatricopeptide repeat (PPR) superfamily protein3.3e-1130.77Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLR---DETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDC
        +++ILG   +  LLW  +   ++  +  +    F I+F+ Y+ A+L +EA  A  R+ EF ++   D+     L+ +LC+ +HV  AQ+  FGK+KG   
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLR---DETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDC

Query:  DASTKIHNLILRGWLKM
          S K +++++RGW ++
Subjt:  DASTKIHNLILRGWLKM

AT1G80550.1 Pentatricopeptide repeat (PPR) superfamily protein2.8e-3457.98Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKS---KGLDC
        ++DILGK+FE ++ WALI RM  +  +  +H TFRI+FK Y +AHLV EAI A ++L +F LRDET F NL+DALCE++HVVEA++LCFGK+    G   
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKS---KGLDC

Query:  DASTKIHNLILRGWLKMGW
         ++TKIHNLILRGW K+GW
Subjt:  DASTKIHNLILRGWLKMGW

AT3G15200.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.3e-1132.76Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETL-FCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA
        +LD+LGK    +    +   M +     ++  T+ +L   YA+AH V EA+   ER +EF + D+ + F  L+  LC Y+HV  A+ L   + +   CD 
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETL-FCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA

Query:  STKIHNLILRGWLKMG
          K  N+IL GW  +G
Subjt:  STKIHNLILRGWLKMG

AT5G15010.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-0832.46Show/hide
Query:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLR---DETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDC
        M+ ILGK  +    W LI  M++   + ++  T  I+ + Y + H V +AI      + FKL    D+  F +L+ ALC Y++V +A  L F        
Subjt:  MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLR---DETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDC

Query:  DASTKIHNLILRGW
        DA  K  N++L GW
Subjt:  DASTKIHNLILRGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGACATTCTTGGTAAGTTCTTTGAGTCCAAGCTTTTGTGGGCTTTGATTCAACGTATGCAACAATCCCCGTTTGCTTCTTTGGATCATGCGACGTTTCGCATTTT
GTTTAAGCATTATGCGTCGGCACATTTGGTTACTGAAGCGATTGCTGCTTGTGAGAGATTGCGTGAGTTTAAATTGAGGGATGAGACTTTGTTTTGTAATCTCATTGACG
CACTTTGTGAGTATAGACATGTAGTTGAAGCTCAGGATTTGTGTTTTGGGAAGAGCAAGGGGTTGGATTGTGATGCGAGTACAAAGATTCATAACTTGATTCTTCGTGGT
TGGCTTAAGATGGGGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTGACATTCTTGGTAAGTTCTTTGAGTCCAAGCTTTTGTGGGCTTTGATTCAACGTATGCAACAATCCCCGTTTGCTTCTTTGGATCATGCGACGTTTCGCATTTT
GTTTAAGCATTATGCGTCGGCACATTTGGTTACTGAAGCGATTGCTGCTTGTGAGAGATTGCGTGAGTTTAAATTGAGGGATGAGACTTTGTTTTGTAATCTCATTGACG
CACTTTGTGAGTATAGACATGTAGTTGAAGCTCAGGATTTGTGTTTTGGGAAGAGCAAGGGGTTGGATTGTGATGCGAGTACAAAGATTCATAACTTGATTCTTCGTGGT
TGGCTTAAGATGGGGTGGTAG
Protein sequenceShow/hide protein sequence
MLDILGKFFESKLLWALIQRMQQSPFASLDHATFRILFKHYASAHLVTEAIAACERLREFKLRDETLFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDASTKIHNLILRG
WLKMGW