; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011562 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011562
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr1:27786643..27786990
RNA-Seq ExpressionLag0011562
SyntenyLag0011562
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014158.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4986.09Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFEF+L W LIQRM QSPFAS DHATF I+FKRY S HLV+EAIAAYERL EFKLRDETSFCNLIDALCEYRHVVEAQDLCFGK++ L+C AS
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMG
        TKIHNLILRGWLKMG
Subjt:  TKIHNLILRGWLKMG

XP_022148858.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Momordica charantia]3.3e-5086.09Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFEF++ W L+QRMQQS FAS DHATF ILFKRY S HLVTEAIAAYER  EFKLRDETSFCNLIDALCEYRHVVEAQDLCFGK+K +DC+AS
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMG
        TKIHNLILRGWLKMG
Subjt:  TKIHNLILRGWLKMG

XP_022953157.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata]3.3e-5086.09Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFEF+L W LIQRM QSPFAS DHATF I+FKRY S HLV+EAIAAYERL EFKLRDETSFCNLID+LCEYRHVVEAQDLCFGK++ L+CDAS
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMG
        TKIHNLILRGWLKMG
Subjt:  TKIHNLILRGWLKMG

XP_022991827.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima]1.5e-5086.96Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFEF+L W LIQRM QSPFAS DHATF I+FKRY S HLV+EAIAAYERL EFKLRDETSFCNLIDALCEYRHVVEAQDLCFGK++ L+CDAS
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMG
        TKIHNLILRGWLKMG
Subjt:  TKIHNLILRGWLKMG

XP_023547614.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita pepo subsp. pepo]9.7e-5086.09Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFEF+L W LIQRM QSPFAS DHATF I+FKRY S HLV+EAIAAYERL EFKLRDETSFCNLIDALCEYRHVVEAQDLCFGK++ L+C AS
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMG
        TKIHNLILRGWLKMG
Subjt:  TKIHNLILRGWLKMG

TrEMBL top hitse value%identityAlignment
A0A1S3CFA1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial5.8e-4882.61Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFEF+L W LI RM+QSPFA  DH TF ILFKRY + HLVTEAIAAYERL EFKLRDETSFCNLIDALCE RHV EAQ+LCFGK++ LDCD+S
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMG
        TKIHNLILRGWLKMG
Subjt:  TKIHNLILRGWLKMG

A0A5A7UVK9 Pentatricopeptide repeat-containing protein2.6e-4883.48Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFEF+L W LI RM+QSPFA  DH TF ILFKRY S HLVTEAIAAYERL EFKLRDETSFCNLIDALCE RHV EAQ+LCFGK++ LDCD+S
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMG
        TKIHNLILRGWLKMG
Subjt:  TKIHNLILRGWLKMG

A0A6J1D599 pentatricopeptide repeat-containing protein At1g80550, mitochondrial1.6e-5086.09Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFEF++ W L+QRMQQS FAS DHATF ILFKRY S HLVTEAIAAYER  EFKLRDETSFCNLIDALCEYRHVVEAQDLCFGK+K +DC+AS
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMG
        TKIHNLILRGWLKMG
Subjt:  TKIHNLILRGWLKMG

A0A6J1GNU3 pentatricopeptide repeat-containing protein At1g80550, mitochondrial1.6e-5086.09Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFEF+L W LIQRM QSPFAS DHATF I+FKRY S HLV+EAIAAYERL EFKLRDETSFCNLID+LCEYRHVVEAQDLCFGK++ L+CDAS
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMG
        TKIHNLILRGWLKMG
Subjt:  TKIHNLILRGWLKMG

A0A6J1JMZ1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial7.3e-5186.96Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS
        MLDILGKFFEF+L W LIQRM QSPFAS DHATF I+FKRY S HLV+EAIAAYERL EFKLRDETSFCNLIDALCEYRHVVEAQDLCFGK++ L+CDAS
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDAS

Query:  TKIHNLILRGWLKMG
        TKIHNLILRGWLKMG
Subjt:  TKIHNLILRGWLKMG

SwissProt top hitse value%identityAlignment
Q9C9A2 Pentatricopeptide repeat-containing protein At1g71060, mitochondrial1.3e-0932.14Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETS-FCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA
        +++ LGK  +F+L+W+L+  M+     S +  TF ++ +RY     V EAI A+ ++ EF  + E+S F  ++D L + R+V +AQ + F K K    + 
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETS-FCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA

Query:  STKIHNLILRGW
          K + ++L GW
Subjt:  STKIHNLILRGW

Q9LFQ4 Pentatricopeptide repeat-containing protein At5g15010, mitochondrial3.9e-0933.04Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLR-DETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA
        M+ ILGK  +F+  W LI  M++   + ++  T  I+ ++Y + H V +AI  +     FKL      F +L+ ALC Y++V +A  L F        DA
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLR-DETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA

Query:  STKIHNLILRGW
          K  N++L GW
Subjt:  STKIHNLILRGW

Q9LIL5 Putative pentatricopeptide repeat-containing protein At3g152003.2e-1133.62Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDE-TSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA
        +LD+LGK   FE    +   M +     ++  T+ +L  RY + H V EA+  +ER  EF + D+  +F  L+  LC Y+HV  A+ L   + +   CD 
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDE-TSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA

Query:  STKIHNLILRGWLKMG
          K  N+IL GW  +G
Subjt:  STKIHNLILRGWLKMG

Q9M8M3 Pentatricopeptide repeat-containing protein At1g80550, mitochondrial1.2e-3461.02Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKS---KGLDC
        ++DILGK+FEFE+ WALI RM  +  +  +H TF I+FKRYV+ HLV EAI AY++L +F LRDETSF NL+DALCE++HVVEA++LCFGK+    G   
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKS---KGLDC

Query:  DASTKIHNLILRGWLKMG
         ++TKIHNLILRGW K+G
Subjt:  DASTKIHNLILRGWLKMG

Q9SSR6 Pentatricopeptide repeat-containing protein At1g52640, mitochondrial1.4e-1130.43Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRD-ETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA
        +++ILG   +F LLW  +   ++  +  +    F I+F+ Y   +L +EA  A+ R++EF ++        L+ +LC+ +HV  AQ+  FGK+KG     
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRD-ETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA

Query:  STKIHNLILRGWLKM
        S K +++++RGW ++
Subjt:  STKIHNLILRGWLKM

Arabidopsis top hitse value%identityAlignment
AT1G52640.1 Pentatricopeptide repeat (PPR) superfamily protein1.0e-1230.43Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRD-ETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA
        +++ILG   +F LLW  +   ++  +  +    F I+F+ Y   +L +EA  A+ R++EF ++        L+ +LC+ +HV  AQ+  FGK+KG     
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRD-ETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA

Query:  STKIHNLILRGWLKM
        S K +++++RGW ++
Subjt:  STKIHNLILRGWLKM

AT1G71060.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.5e-1132.14Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETS-FCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA
        +++ LGK  +F+L+W+L+  M+     S +  TF ++ +RY     V EAI A+ ++ EF  + E+S F  ++D L + R+V +AQ + F K K    + 
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETS-FCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA

Query:  STKIHNLILRGW
          K + ++L GW
Subjt:  STKIHNLILRGW

AT1G80550.1 Pentatricopeptide repeat (PPR) superfamily protein8.5e-3661.02Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKS---KGLDC
        ++DILGK+FEFE+ WALI RM  +  +  +H TF I+FKRYV+ HLV EAI AY++L +F LRDETSF NL+DALCE++HVVEA++LCFGK+    G   
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKS---KGLDC

Query:  DASTKIHNLILRGWLKMG
         ++TKIHNLILRGW K+G
Subjt:  DASTKIHNLILRGWLKMG

AT3G15200.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.3e-1233.62Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDE-TSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA
        +LD+LGK   FE    +   M +     ++  T+ +L  RY + H V EA+  +ER  EF + D+  +F  L+  LC Y+HV  A+ L   + +   CD 
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDE-TSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA

Query:  STKIHNLILRGWLKMG
          K  N+IL GW  +G
Subjt:  STKIHNLILRGWLKMG

AT5G15010.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.8e-1033.04Show/hide
Query:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLR-DETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA
        M+ ILGK  +F+  W LI  M++   + ++  T  I+ ++Y + H V +AI  +     FKL      F +L+ ALC Y++V +A  L F        DA
Subjt:  MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLR-DETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDA

Query:  STKIHNLILRGW
          K  N++L GW
Subjt:  STKIHNLILRGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGACATTCTTGGTAAGTTCTTTGAGTTCGAGCTTTTGTGGGCTTTGATTCAGCGTATGCAACAATCCCCGTTTGCTTCTCTAGATCATGCGACGTTTCACATTTT
GTTTAAGCGTTACGTGTCGACGCATTTGGTTACTGAAGCGATTGCTGCTTATGAGAGATTGCTGGAGTTTAAATTGAGGGATGAGACTTCGTTTTGTAATCTCATTGACG
CACTTTGTGAGTATAGACATGTAGTTGAAGCTCAGGATTTGTGTTTTGGGAAGAGCAAGGGGTTGGATTGTGATGCGAGTACGAAGATTCATAACTTGATTCTTCGTGGT
TGGCTTAAGATGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGACATTCTTGGTAAGTTCTTTGAGTTCGAGCTTTTGTGGGCTTTGATTCAGCGTATGCAACAATCCCCGTTTGCTTCTCTAGATCATGCGACGTTTCACATTTT
GTTTAAGCGTTACGTGTCGACGCATTTGGTTACTGAAGCGATTGCTGCTTATGAGAGATTGCTGGAGTTTAAATTGAGGGATGAGACTTCGTTTTGTAATCTCATTGACG
CACTTTGTGAGTATAGACATGTAGTTGAAGCTCAGGATTTGTGTTTTGGGAAGAGCAAGGGGTTGGATTGTGATGCGAGTACGAAGATTCATAACTTGATTCTTCGTGGT
TGGCTTAAGATGGGGTGA
Protein sequenceShow/hide protein sequence
MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDASTKIHNLILRG
WLKMG