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Lag0011569 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011569
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:27887222..27887587
RNA-Seq ExpressionLag0011569
SyntenyLag0011569
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037703.1 uncharacterized protein E6C27_scaffold1593G00270 [Cucumis melo var. makuwa]9.0e-0470.59Show/hide
Query:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIE
        M+GSASTNFSD++ IGE+IE+GVK GRIFD + E
Subjt:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIE
XP_016903339.1 PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]9.0e-0470.59Show/hide
Query:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIE
        M+GSASTNFSD++ IGE+IE+GVK GRIFD + E
Subjt:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIE
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]9.0e-0453.33Show/hide
Query:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIESSIEDEEDYSKDQQVQATKVENVDPI
        M+GSASTNFSDIM IGE IEYGV+ GRI   A E     +  +SK ++ +   V  VDPI
Subjt:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIESSIEDEEDYSKDQQVQATKVENVDPI
TrEMBL top hitse value%identityAlignment
A0A1S4E534 uncharacterized protein LOC1035028384.3e-0470.59Show/hide
Query:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIE
        M+GSASTNFSD++ IGE+IE+GVK GRIFD + E
Subjt:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIE
A0A5A7T401 Retrotrans_gag domain-containing protein4.3e-0470.59Show/hide
Query:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIE
        M+GSASTNFSD++ IGE+IE+GVK GRIFD + E
Subjt:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIE
A0A5D3C3K5 Uncharacterized protein9.7e-0471.43Show/hide
Query:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIES
        M+GSASTNFSDI+ IGE IE+GVK GRIFD   E+
Subjt:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIES
A0A6J1CNY7 Ribonuclease H4.3e-0453.33Show/hide
Query:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIESSIEDEEDYSKDQQVQATKVENVDPI
        M+GSASTNFSDIM IGE IEYGV+ GRI   A E     +  +SK ++ +   V  VDPI
Subjt:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIESSIEDEEDYSKDQQVQATKVENVDPI
A0A6J1DZ90 Ribonuclease H7.4e-0455Show/hide
Query:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIESSIEDEEDYSKDQQVQATKVENVDPI
        MIGSASTNFSDIM IGE IEYGV+  RI   A E     +  +SK ++ + T V  VDPI
Subjt:  MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIESSIEDEEDYSKDQQVQATKVENVDPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGGAAGTGCATCCACCAACTTTTCAGACATCATGATGATTGGAGAAATAATAGAATACGGGGTTAAGCAGGGAAGGATATTCGATGATGCAATTGAATCATCAAT
CGAAGACGAAGAAGACTACTCAAAGGATCAACAAGTCCAAGCAACAAAGGTGGAGAATGTCGATCCAATACCAATTGCATTTATCGAGTCTTCGTCGTGCTTATTCTGGA
AAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGGAAGTGCATCCACCAACTTTTCAGACATCATGATGATTGGAGAAATAATAGAATACGGGGTTAAGCAGGGAAGGATATTCGATGATGCAATTGAATCATCAAT
CGAAGACGAAGAAGACTACTCAAAGGATCAACAAGTCCAAGCAACAAAGGTGGAGAATGTCGATCCAATACCAATTGCATTTATCGAGTCTTCGTCGTGCTTATTCTGGA
AAAACTAG
Protein sequenceShow/hide protein sequence
MIGSASTNFSDIMMIGEIIEYGVKQGRIFDDAIESSIEDEEDYSKDQQVQATKVENVDPIPIAFIESSSCLFWKN