; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011576 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011576
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase RNF126-like
Genome locationchr1:28132049..28139478
RNA-Seq ExpressionLag0011576
SyntenyLag0011576
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571005.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1542.48Show/hide
Query:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN
        D  +  D Q    LEV++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF QIYI  +L+SL+IGAV  EVI   +AS+ +Q+  E  + N
Subjt:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN

Query:  FHLVDTVDQIHHS
         H+V  VD +  S
Subjt:  FHLVDTVDQIHHS

KAG6603243.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]7.4e-1345.3Show/hide
Query:  AASDAQLHQVLEVRLRFFLCLVDAFS-----NRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKRE
        AA+ ++ H+ LEVR+R F  L+ A S      +I+FET P P+ DALF L L +L  DP+F   +I +LL +LHI A  CEVI   +AS + Q+ A  RE
Subjt:  AASDAQLHQVLEVRLRFFLCLVDAFS-----NRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKRE

Query:  MNFHLVDTVDQIHHSWM
         +FH+V  VD I + WM
Subjt:  MNFHLVDTVDQIHHSWM

XP_022944063.1 RING-H2 finger protein ATL16-like [Cucurbita moschata]4.6e-1541.59Show/hide
Query:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN
        D  +  D Q    LE+++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF QIYI  +L+SL+IGAV  EVI   +AS+ +Q+  E  + N
Subjt:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN

Query:  FHLVDTVDQIHHS
         H+V  VD +  S
Subjt:  FHLVDTVDQIHHS

XP_022985641.1 RING-H2 finger protein ATL16-like [Cucurbita maxima]1.6e-1542.48Show/hide
Query:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN
        D  +  D Q    LEV++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF QIYI ++L+SL+IGAV  EVI   +AS+ +Q+  E  + N
Subjt:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN

Query:  FHLVDTVDQIHHS
         H+V  VD +  S
Subjt:  FHLVDTVDQIHHS

XP_023512244.1 RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo]6.0e-1540.71Show/hide
Query:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN
        D  +  D Q    LEV++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF QIYI  +L+SL++GAV  E+I   +AS+ +Q+  E  + N
Subjt:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN

Query:  FHLVDTVDQIHHS
         H+V  VD +  S
Subjt:  FHLVDTVDQIHHS

TrEMBL top hitse value%identityAlignment
A0A0A0LRB0 RING-type domain-containing protein2.0e-0831.01Show/hide
Query:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN
        +  AA++ Q  Q +E+RL  F  LV + S++I+ +T PI + D L   PL EL+D P      + + L S +I    C+ I   ++S+  Q+VA     N
Subjt:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN

Query:  FHLVDTVDQIHHSWMRLIDVDFSYRKRTG
        FH++  +D ++  W+ L   + +   R G
Subjt:  FHLVDTVDQIHHSWMRLIDVDFSYRKRTG

A0A6J1FXN0 RING-H2 finger protein ATL16-like2.2e-1541.59Show/hide
Query:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN
        D  +  D Q    LE+++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF QIYI  +L+SL+IGAV  EVI   +AS+ +Q+  E  + N
Subjt:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN

Query:  FHLVDTVDQIHHS
         H+V  VD +  S
Subjt:  FHLVDTVDQIHHS

A0A6J1G7Z5 E3 ubiquitin-protein ligase RNF126-like5.3e-0935.4Show/hide
Query:  ASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLV
        ASD Q  Q+LE+RL     L+   S +I+ +T   P+ DALF   L +L   P     Y++Q L S  I    C++I   ++S+ +Q+ A   ++NFH+V
Subjt:  ASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLV

Query:  DTVDQIHHSWMRL
          VD I   W+ L
Subjt:  DTVDQIHHSWMRL

A0A6J1J8T7 RING-H2 finger protein ATL16-like7.7e-1642.48Show/hide
Query:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN
        D  +  D Q    LEV++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF QIYI ++L+SL+IGAV  EVI   +AS+ +Q+  E  + N
Subjt:  DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMN

Query:  FHLVDTVDQIHHS
         H+V  VD +  S
Subjt:  FHLVDTVDQIHHS

A0A6J1KYV1 E3 ubiquitin-protein ligase RNF126-like1.0e-0733.63Show/hide
Query:  ASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLV
        AS  Q  Q+LE+RL     L+   S +I+ +T   P+ DALF   L +L   P     Y++Q L S  I    C++I   ++S+ +Q+ A   ++NFH+V
Subjt:  ASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLV

Query:  DTVDQIHHSWMRL
          VD     W+ L
Subjt:  DTVDQIHHSWMRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATAATAGAGCTAGGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCAATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGC
AGAATGCTCAGCCCCCCCTTCGGTTTCTTCTTCTCGCCACAATACCCACGTCGCCGTTGCACGCTTTCTTTCTCTCTCTCCCGCCATTCTTATCGAGCATCACCCACGAG
CAGCGATTTCTTTCTCCATCTCCTTCTCTGATGCTCTTTCGTTGGTAGTAAGACCCACGACCACCACCTTCATTCTCGTTGTCTCGTTTTCCTTCTTCTCTGGTTCAGAT
TCACAAGAACCCATGGTCAGGCGAATCAAAATGAGGCCCACACACGTGCAATCAACAGCGTATTCCTCCGCGAACGACTCCAATCTTGTCCAAATCCTTGGGTTTCGGTC
TTTAATAAAACATTTCAACATTTTTGCTCGCTTTGTGAATGAACGCGATACTTGTTTGATTCTTAAGCATGTTGCTTTGTTGATTCATAAGCATGAGGTATGGTTGTTGT
TGGCTATGTTGCATATGAGTCATGTTTGCATAGTGTATGTTCATTGGGGAGAGGCAGAGCATGACGACGATGCTCAGGCGGCTTCCGACGCCCAACTGCATCAAGTTCTG
GAAGTCCGATTGCGCTTTTTCCTCTGTCTGGTCGACGCTTTTTCAAACCGAATCATTTTCGAAACGGAACCGATTCCATTGAAAGATGCTCTGTTCTCTCTCCCTCTACA
CGAACTCGACGATGATCCCGTGTTCTTCCAGATCTACATCATGCAGTTGCTCATATCACTCCACATCGGCGCCGTCACTTGTGAGGTCATCGTTGGGCATGTAGCGTCGT
ACGTCGTTCAAATGGTGGCCGAAAAAAGAGAGATGAACTTCCATCTCGTCGACACTGTCGATCAAATCCACCACAGCTGGATGCGGTTGATTGATGTGGACTTTTCCTAC
CGCAAGCGCACGGGTCAAGTAATAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGATAATAGAGCTAGGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCAATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGC
AGAATGCTCAGCCCCCCCTTCGGTTTCTTCTTCTCGCCACAATACCCACGTCGCCGTTGCACGCTTTCTTTCTCTCTCTCCCGCCATTCTTATCGAGCATCACCCACGAG
CAGCGATTTCTTTCTCCATCTCCTTCTCTGATGCTCTTTCGTTGGTAGTAAGACCCACGACCACCACCTTCATTCTCGTTGTCTCGTTTTCCTTCTTCTCTGGTTCAGAT
TCACAAGAACCCATGGTCAGGCGAATCAAAATGAGGCCCACACACGTGCAATCAACAGCGTATTCCTCCGCGAACGACTCCAATCTTGTCCAAATCCTTGGGTTTCGGTC
TTTAATAAAACATTTCAACATTTTTGCTCGCTTTGTGAATGAACGCGATACTTGTTTGATTCTTAAGCATGTTGCTTTGTTGATTCATAAGCATGAGGTATGGTTGTTGT
TGGCTATGTTGCATATGAGTCATGTTTGCATAGTGTATGTTCATTGGGGAGAGGCAGAGCATGACGACGATGCTCAGGCGGCTTCCGACGCCCAACTGCATCAAGTTCTG
GAAGTCCGATTGCGCTTTTTCCTCTGTCTGGTCGACGCTTTTTCAAACCGAATCATTTTCGAAACGGAACCGATTCCATTGAAAGATGCTCTGTTCTCTCTCCCTCTACA
CGAACTCGACGATGATCCCGTGTTCTTCCAGATCTACATCATGCAGTTGCTCATATCACTCCACATCGGCGCCGTCACTTGTGAGGTCATCGTTGGGCATGTAGCGTCGT
ACGTCGTTCAAATGGTGGCCGAAAAAAGAGAGATGAACTTCCATCTCGTCGACACTGTCGATCAAATCCACCACAGCTGGATGCGGTTGATTGATGTGGACTTTTCCTAC
CGCAAGCGCACGGGTCAAGTAATAATATAG
Protein sequenceShow/hide protein sequence
MSDNRARLWQVLRIELKVVIICQCRKNYFAAAELGFAECSAPPSVSSSRHNTHVAVARFLSLSPAILIEHHPRAAISFSISFSDALSLVVRPTTTTFILVVSFSFFSGSD
SQEPMVRRIKMRPTHVQSTAYSSANDSNLVQILGFRSLIKHFNIFARFVNERDTCLILKHVALLIHKHEVWLLLAMLHMSHVCIVYVHWGEAEHDDDAQAASDAQLHQVL
EVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHSWMRLIDVDFSY
RKRTGQVII